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ClCG08G006540 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G006540
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNAD(P)H-quinone oxidoreductase subunit I, chloroplastic
Genome locationCG_Chr08:19008568..19008792
RNA-Seq ExpressionClCG08G006540
SyntenyClCG08G006540
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ATL62506.1 NADH dehydrogenase subunit I [Coptosapelta flavescens]2.7e-0886.49Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MFSMVT F+NY QQRVRAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
YP_009340282.1 NADH dehydrogenase subunit I [Lobelia polyphylla]1.2e-0889.19Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MF MVT FMNYSQQRVRAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
YP_009458437.1 NdhI [Patrinia saniculifolia]1.6e-0889.19Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MFSMVT FMNYSQQ VRAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
YP_010044008.1 NADH dehydrogenase subunit I [Securigera varia]2.0e-0889.19Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MF MVTRFMNYSQQ VRAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
YP_010117743.1 NADH-plastoquinone oxidoreductase subunit I [Aucuba obcordata]2.0e-0886.49Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MFSMVT FMNYSQQ +RAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
TrEMBL top hitse value%identityAlignment
A0A1L6BUS1 NADH-quinone oxidoreductase subunit I5.8e-0989.19Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MF MVT FMNYSQQRVRAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
A0A343SQX4 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic7.5e-0989.19Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MFSMVT FMNYSQQ VRAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
A0A6F8FEQ5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic1.3e-0886.49Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MFSMVT F+NY QQRVRAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
A0A7S8WSG3 NADH dehydrogenase subunit I9.9e-0989.19Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MF MVTRFMNYSQQ VRAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
A0A7T1FV74 NADH-plastoquinone oxidoreductase subunit I9.9e-0986.49Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MFSMVT FMNYSQQ +RAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
SwissProt top hitse value%identityAlignment
Q0G9Q8 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic7.8e-1186.49Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MFSMVT FMNYSQQ VRAA+YIGQGFMITLSHA+R P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
Q68RV2 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic5.9e-1186.49Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MFSMVT FMNY QQ VRAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
Q8HVJ2 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic2.3e-1083.78Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MF MVT FMNY QQ VRAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
Q8HVV8 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic2.3e-1083.78Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MF MVT FMNY QQ VRAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
Q8HVW2 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic2.3e-1083.78Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        MF MVT FMNY QQ VRAA+YIGQGFMITLSHANR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
Arabidopsis top hitse value%identityAlignment
ATCG01090.1 NADPH dehydrogenases1.2e-0972.97Show/hide
Query:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP
        M  M+T FMNY QQ +RAA+YIGQGFMITLSH NR P
Subjt:  MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCTATGGTAACTAGGTTCATGAATTATAGTCAACAAAGAGTACGAGCTGCAAAGTACATTGGTCAGGGTTTCATGATTACTTTATCTCATGCAAATCGTAGCCC
AGAGAGGCGTGATGGAGACAAATCCTGCTATTCAATGATGGGGGAAGAGGAGAACCACCACAAATCTGAAAAATATAGCTCCATGACATCTGGGCAAGCGTCTAGTCGGC
GGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCTATGGTAACTAGGTTCATGAATTATAGTCAACAAAGAGTACGAGCTGCAAAGTACATTGGTCAGGGTTTCATGATTACTTTATCTCATGCAAATCGTAGCCC
AGAGAGGCGTGATGGAGACAAATCCTGCTATTCAATGATGGGGGAAGAGGAGAACCACCACAAATCTGAAAAATATAGCTCCATGACATCTGGGCAAGCGTCTAGTCGGC
GGTGA
Protein sequenceShow/hide protein sequence
MFSMVTRFMNYSQQRVRAAKYIGQGFMITLSHANRSPERRDGDKSCYSMMGEEENHHKSEKYSSMTSGQASSRR