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ClCG08G006825 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G006825
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDUF4283 domain-containing protein
Genome locationCG_Chr08:19199475..19199801
RNA-Seq ExpressionClCG08G006825
SyntenyClCG08G006825
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040039.1 hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa]1.3e-2450.49Show/hide
Query:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL
        +F W  T VLTR   HDDW +I+E L +  D    + PFHA+K LI  + + QA+LLC NK W T+G F VKF++WS + HA  K++PSYGGW+K RG+ 
Subjt:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL

Query:  LNA
        L+A
Subjt:  LNA

KAA0050054.1 hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]1.7e-2449.51Show/hide
Query:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL
        +F+W  T VLTR   HDDW KI+E L +  D    + PFHA+K LI  + + QA L+C NK W T+G F VKF++W+ + HA  K++PSYGGW+K RG+ 
Subjt:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL

Query:  LNA
        L+A
Subjt:  LNA

TYK05762.1 cleavage and polyadenylation specificity factor subunit 1 [Cucumis melo var. makuwa]1.0e-2454Show/hide
Query:  WSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGILLNA
        W+   VLTR   HDDW KI+E L+D  D   ++ PFHA+K LI  ++K QA L+C NK W T+G F VKF++W+ + HA SK+VPSYGGW+K RGI L+A
Subjt:  WSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGILLNA

TYK10355.1 hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]1.7e-2449.51Show/hide
Query:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL
        +F+W  T VLTR   HDDW KI+E L +  D    + PFHA+K LI  + + QA L+C NK W T+G F VKF++W+ + HA  K++PSYGGW+K RG+ 
Subjt:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL

Query:  LNA
        L+A
Subjt:  LNA

TYK24535.1 hypothetical protein E5676_scaffold266G00770 [Cucumis melo var. makuwa]7.8e-2550.49Show/hide
Query:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL
        +F+W  T VLTR   HDDW +I+E L +  D    + PFHA+K LI  + + QA+LLC NK W T+G F VKF++WS + HA  K++PSYGGW+K RG+ 
Subjt:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL

Query:  LNA
        L+A
Subjt:  LNA

TrEMBL top hitse value%identityAlignment
A0A5A7TFK7 DUF4283 domain-containing protein6.4e-2550.49Show/hide
Query:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL
        +F W  T VLTR   HDDW +I+E L +  D    + PFHA+K LI  + + QA+LLC NK W T+G F VKF++WS + HA  K++PSYGGW+K RG+ 
Subjt:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL

Query:  LNA
        L+A
Subjt:  LNA

A0A5A7U495 DUF4283 domain-containing protein8.4e-2549.51Show/hide
Query:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL
        +F+W  T VLTR   HDDW KI+E L +  D    + PFHA+K LI  + + QA L+C NK W T+G F VKF++W+ + HA  K++PSYGGW+K RG+ 
Subjt:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL

Query:  LNA
        L+A
Subjt:  LNA

A0A5D3C3G6 Cleavage and polyadenylation specificity factor subunit 14.9e-2554Show/hide
Query:  WSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGILLNA
        W+   VLTR   HDDW KI+E L+D  D   ++ PFHA+K LI  ++K QA L+C NK W T+G F VKF++W+ + HA SK+VPSYGGW+K RGI L+A
Subjt:  WSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGILLNA

A0A5D3CFS8 DUF4283 domain-containing protein8.4e-2549.51Show/hide
Query:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL
        +F+W  T VLTR   HDDW KI+E L +  D    + PFHA+K LI  + + QA L+C NK W T+G F VKF++W+ + HA  K++PSYGGW+K RG+ 
Subjt:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL

Query:  LNA
        L+A
Subjt:  LNA

A0A5D3DLP0 DUF4283 domain-containing protein3.8e-2550.49Show/hide
Query:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL
        +F+W  T VLTR   HDDW +I+E L +  D    + PFHA+K LI  + + QA+LLC NK W T+G F VKF++WS + HA  K++PSYGGW+K RG+ 
Subjt:  NFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL

Query:  LNA
        L+A
Subjt:  LNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAAGAAAATTTCAAATGGAGCAACACGTTTGTACTTACTCGACATAGAGTCCATGACGATTGGGTAAAAATAATGGAATCCCTTCGAGATTCCAAT
GATGTCATTGATGCATTTAACCCCTTCCATGCGAATAAGGTGTTAATATCCGTAAGAGAGAAAGTTCAGGCTCGTCTGTTATGCCTAAACAAGAGATGGGTTACT
ATAGGACCTTTCATTGTGAAATTCAAAAAATGGAGTTCACAACTACATGCCCATTCTAAGCTTGTTCCTAGTTATGGTGGCTGGCTTAAGTTTAGAGGAATTCTA
TTAAACGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAAGAAAATTTCAAATGGAGCAACACGTTTGTACTTACTCGACATAGAGTCCATGACGATTGGGTAAAAATAATGGAATCCCTTCGAGATTCCAAT
GATGTCATTGATGCATTTAACCCCTTCCATGCGAATAAGGTGTTAATATCCGTAAGAGAGAAAGTTCAGGCTCGTCTGTTATGCCTAAACAAGAGATGGGTTACT
ATAGGACCTTTCATTGTGAAATTCAAAAAATGGAGTTCACAACTACATGCCCATTCTAAGCTTGTTCCTAGTTATGGTGGCTGGCTTAAGTTTAGAGGAATTCTA
TTAAACGCCTGA
Protein sequenceShow/hide protein sequence
MEEEENFKWSNTFVLTRHRVHDDWVKIMESLRDSNDVIDAFNPFHANKVLISVREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHSKLVPSYGGWLKFRGIL
LNA