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ClCG08G006840 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G006840
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr08:19215077..19215376
RNA-Seq ExpressionClCG08G006840
SyntenyClCG08G006840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054914.1 hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa]1.4e-2066.67Show/hide
Query:  MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF
        MG STANILIL I VAS+ALRLPSETTA A+ADP P     L    PIYN+ +KV L  +A S EEN DDES+PP K+ K  RKPWPK PVSKSPPPPF
Subjt:  MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF

KAE8637368.1 hypothetical protein CSA_004461, partial [Cucumis sativus]5.7e-1460Show/hide
Query:  MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQP
        MG STANI+IL I VAS+ALRLP+ETTA A+ADP P     L     IYN+ +KV L  +A S E + DDES+PPLK+EK  RKPWPK P
Subjt:  MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQP

KAE8646678.1 hypothetical protein Csa_023589, partial [Cucumis sativus]1.3e-1361.45Show/hide
Query:  SMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF
        S+ALRLP+ETTA A+ADP P     L     IYN+ +KV L  +A S E + DDES+PPLK+EK  RKPWPK PVSKSPPPPF
Subjt:  SMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF

KAG6578898.1 hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia]4.8e-1356.44Show/hide
Query:  MGYSTANILILAILVASMALRLPSETTASAVADPS--PPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPP
        MGYSTAN L+  ILVAS+ALRLP E  ASA+  PS  PPP  H      ++  PIKVSL  KA+      D+   P  KDEK  RKPWPKQPV K+PPPP
Subjt:  MGYSTANILILAILVASMALRLPSETTASAVADPS--PPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPP

Query:  F
        F
Subjt:  F

KAG6578899.1 hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia]3.0e-1558.65Show/hide
Query:  MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPS--HLALAAPIYNSPIKVSLKGKAASAEENRDDESEPP---LKDEKKGRKPWPKQPVSKSP
        MGYSTAN+ I+ ILVAS+ALR PS TTASAV  PSP PP   H A     +   IK+SL+GKA    EN +DESEPP    K  +  R+PWPK+PV+KSP
Subjt:  MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPS--HLALAAPIYNSPIKVSLKGKAASAEENRDDESEPP---LKDEKKGRKPWPKQPVSKSP

Query:  PPPF
        PPPF
Subjt:  PPPF

TrEMBL top hitse value%identityAlignment
A0A0A0K9K2 Uncharacterized protein2.2e-1963.64Show/hide
Query:  MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF
        MG STANI+IL I VAS+ALRLP+ETTA A+ADP P     L     IYN+ +KV L  +A S E + DDES+PPLK+EK  RKPWPK PVSKSPPPPF
Subjt:  MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF

A0A5A7UIB8 Uncharacterized protein6.7e-2166.67Show/hide
Query:  MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF
        MG STANILIL I VAS+ALRLPSETTA A+ADP P     L    PIYN+ +KV L  +A S EEN DDES+PP K+ K  RKPWPK PVSKSPPPPF
Subjt:  MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTATTCGACGGCCAATATTCTAATTTTGGCTATTTTGGTAGCATCCATGGCTCTAAGGCTACCGTCGGAAACCACCGCAAGCGCCGTGGCTGACCCTTCT
CCTCCTCCCCCGTCGCACTTGGCATTGGCGGCGCCGATATATAATTCACCTATAAAAGTTAGCCTTAAAGGCAAAGCAGCCTCAGCAGAAGAAAATAGAGATGAT
GAATCTGAACCACCATTGAAGGATGAAAAGAAGGGCAGAAAACCTTGGCCAAAGCAACCTGTCTCTAAATCTCCACCGCCTCCATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTATTCGACGGCCAATATTCTAATTTTGGCTATTTTGGTAGCATCCATGGCTCTAAGGCTACCGTCGGAAACCACCGCAAGCGCCGTGGCTGACCCTTCT
CCTCCTCCCCCGTCGCACTTGGCATTGGCGGCGCCGATATATAATTCACCTATAAAAGTTAGCCTTAAAGGCAAAGCAGCCTCAGCAGAAGAAAATAGAGATGAT
GAATCTGAACCACCATTGAAGGATGAAAAGAAGGGCAGAAAACCTTGGCCAAAGCAACCTGTCTCTAAATCTCCACCGCCTCCATTTTAG
Protein sequenceShow/hide protein sequence
MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF