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ClCG08G008460 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G008460
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionSHSP domain-containing protein
Genome locationCG_Chr08:20950617..20951178
RNA-Seq ExpressionClCG08G008460
SyntenyClCG08G008460
Gene Ontology termsNA
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646641.1 hypothetical protein Csa_005322 [Cucumis sativus]1.1e-2466.67Show/hide
Query:  QFFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR
        QFFP   +E+ EE N+ S SM LPGFSKDRLRINLNTRTR ++VTGQKSDGLFNI RLNER+ I E C L+GV AKL N+ L +TF K +
Subjt:  QFFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR

KAG6602241.1 hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia]4.2e-0839.08Show/hide
Query:  PDKRWEDDEENNQMSLSMVL--PGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPK
        P+  W++ +E N+    M++   G S+++L+I+++   RT+ +   K +G +NI R+NE I I   CSLD V+A  +NN+L ITFPK
Subjt:  PDKRWEDDEENNQMSLSMVL--PGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPK

KAG7016359.1 hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1959.55Show/hide
Query:  FFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR
        F PD +W   EE +   LSM LPGF K+RL+I LN  TRTL VTGQK DGLFNI+RLNERI I++ CSLDGV A+L ++ L++TF K +
Subjt:  FFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR

XP_018475449.1 PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Raphanus sativus]1.9e-0532.63Show/hide
Query:  GGGLKQFQFFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPK
        G G++   F P   W+D  E   +++   LPGF+K+++++     +R + VTG++  G     R NE   + + C +D +H  L NN L IT PK
Subjt:  GGGLKQFQFFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPK

XP_022939359.1 uncharacterized protein LOC111445297 [Cucurbita moschata]4.0e-1958.43Show/hide
Query:  FFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR
        F PD +W   EE +   LSM LPGF K++L+I LN  TRTL VTGQK DGLFNI+RLNERI I++ CSLDGV A+L +  L++TF K +
Subjt:  FFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR

TrEMBL top hitse value%identityAlignment
A0A067ECS7 SHSP domain-containing protein1.4e-0436.78Show/hide
Query:  FFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPK
        F P   W D+ ENN   L + LP F+K+++RI     +R + VTG++  G     R N+   I   C +D +HAK  N  L +T PK
Subjt:  FFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPK

A0A0A0KB53 SHSP domain-containing protein5.3e-2566.67Show/hide
Query:  QFFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR
        QFFP   +E+ EE N+ S SM LPGFSKDRLRINLNTRTR ++VTGQKSDGLFNI RLNER+ I E C L+GV AKL N+ L +TF K +
Subjt:  QFFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR

A0A6J0MTF1 inactive protein RESTRICTED TEV MOVEMENT 2-like9.4e-0632.63Show/hide
Query:  GGGLKQFQFFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPK
        G G++   F P   W+D  E   +++   LPGF+K+++++     +R + VTG++  G     R NE   + + C +D +H  L NN L IT PK
Subjt:  GGGLKQFQFFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPK

A0A6J1FGX8 uncharacterized protein LOC1114452971.9e-1958.43Show/hide
Query:  FFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR
        F PD +W   EE +   LSM LPGF K++L+I LN  TRTL VTGQK DGLFNI+RLNERI I++ CSLDGV A+L +  L++TF K +
Subjt:  FFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR

V4VZG1 SHSP domain-containing protein1.4e-0436.78Show/hide
Query:  FFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPK
        F P   W D+ ENN   L + LP F+K+++RI     +R + VTG++  G     R N+   I   C +D +HAK  N  L +T PK
Subjt:  FFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27670.1 heat shock protein 217.8e-0526.67Show/hide
Query:  WEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQK----SDGLF---NIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR
        W+  EE +++ +   +PG SK+ ++I++      L++ G++    SD  +   ++     R+Q+ + C  D + A+L N  L+IT PK +
Subjt:  WEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQK----SDGLF---NIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTTCTCTCTTGCATATACAAACACTTGCTATACCCTTCTAATTCATTCTTTGGTGGTGGATTGAAGCAATTTCAATTTTTTCCAGATAAAAGATGGGAGGATGA
TGAAGAAAATAACCAAATGTCATTGAGCATGGTACTTCCAGGTTTTTCAAAAGATCGACTACGAATCAACTTGAATACAAGAACAAGGACTCTTATAGTTACGGGACAAA
AATCAGATGGCTTATTCAATATTATGCGTTTGAACGAACGCATACAAATCAACGAAGCATGCTCATTAGATGGAGTACATGCAAAATTACTCAACAACAATCTGTATATT
ACATTTCCCAAAAACAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTTCTCTCTTGCATATACAAACACTTGCTATACCCTTCTAATTCATTCTTTGGTGGTGGATTGAAGCAATTTCAATTTTTTCCAGATAAAAGATGGGAGGATGA
TGAAGAAAATAACCAAATGTCATTGAGCATGGTACTTCCAGGTTTTTCAAAAGATCGACTACGAATCAACTTGAATACAAGAACAAGGACTCTTATAGTTACGGGACAAA
AATCAGATGGCTTATTCAATATTATGCGTTTGAACGAACGCATACAAATCAACGAAGCATGCTCATTAGATGGAGTACATGCAAAATTACTCAACAACAATCTGTATATT
ACATTTCCCAAAAACAGATAA
Protein sequenceShow/hide protein sequence
MLLLSCIYKHLLYPSNSFFGGGLKQFQFFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYI
TFPKNR