; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG08G009490 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G009490
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationCG_Chr08:22095615..22099569
RNA-Seq ExpressionClCG08G009490
SyntenyClCG08G009490
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR040323 - EARP and GARP complex-interacting protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038461.1 WD repeat-containing protein DWA2-like isoform X1 [Cucumis melo var. makuwa]1.3e-8798.73Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS GENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQ WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

KAG6599107.1 WD repeat-containing protein DWA2, partial [Cucurbita argyrosperma subsp. sororia]5.0e-8797.47Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHLIR+SSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        NILLWSLDCSRK AQVQSKESAG+LHYLSGGTWDPHDSNAIAATSESSVQ WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

KAG7030046.1 WD repeat-containing protein DWA2 [Cucurbita argyrosperma subsp. argyrosperma]5.0e-8797.47Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHLIR+SSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        NILLWSLDCSRK AQVQSKESAG+LHYLSGGTWDPHDSNAIAATSESSVQ WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

XP_008464867.1 PREDICTED: WD repeat-containing protein DWA2-like isoform X1 [Cucumis melo]1.7e-8798.1Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS GENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESS+Q WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

XP_038886470.1 WD repeat-containing protein DWA2-like [Benincasa hispida]3.4e-8899.37Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQ WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

TrEMBL top hitse value%identityAlignment
A0A1S3CMG4 WD repeat-containing protein DWA2-like isoform X18.3e-8898.1Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS GENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESS+Q WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

A0A5A7TA39 WD repeat-containing protein DWA2-like isoform X16.3e-8898.73Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS GENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQ WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

A0A6J1DJW1 WD repeat-containing protein DWA21.2e-8697.47Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENF AAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        NILLWSLDCSRK AQVQSKES GMLHYLSGGTWDPHDSNAIAATSESSVQ WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

A0A6J1G310 WD repeat-containing protein DWA2-like2.4e-8797.47Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHLIR+SSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        NILLWSLDCSRK AQVQSKESAG+LHYLSGGTWDPHDSNAIAATSESSVQ WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

A0A6J1KGF3 WD repeat-containing protein DWA2-like2.4e-8797.47Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHLIR+SSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        NILLWSLDCSRK AQVQSKESAG+LHYLSGGTWDPHDSNAIAATSESSVQ WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

SwissProt top hitse value%identityAlignment
Q3KPT3 EARP-interacting protein homolog4.0e-1528.25Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFG----AAIWQIP-ELYG---------ELNSPQLERVTSLDEHA-SKINCVLW
        +H+I      + +    L  H  EIW + + P D+ + +T ++   +      AA+W+IP EL G           N+  LE +  LD  A   + CV W
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFG----AAIWQIP-ELYG---------ELNSPQLERVTSLDEHA-SKINCVLW

Query:  WPSGRHDKLISIDEENILLWSLDCSRKAAQVQSK---ESAGMLHYLSGGTWDP-HDSNAIAATSESSVQLWDLRTMK
         P G   KL+S+ +  +L+W L  S   + + S    E  G L + S G W P H+   +A  ++++++ WD+R+M+
Subjt:  WPSGRHDKLISIDEENILLWSLDCSRKAAQVQSK---ESAGMLHYLSGGTWDP-HDSNAIAATSESSVQLWDLRTMK

Q5M8I4 EARP-interacting protein homolog9.0e-1527.68Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFG----AAIWQIP-ELYG---------ELNSPQLERVTSLDEHA-SKINCVLW
        +H+I      + +    L  H  EIW +++ P D+ + +T ++   +      AA+W+IP EL G           N+  LE +  LD  A   + CV W
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFG----AAIWQIP-ELYG---------ELNSPQLERVTSLDEHA-SKINCVLW

Query:  WPSGRHDKLISIDEENILLWSLDCSRKAAQVQSK---ESAGMLHYLSGGTWDP-HDSNAIAATSESSVQLWDLRTMK
         P G   KL+S+ +  +++W L  S   + + S    E  G L + S G W P H+   +A  ++++++ WD+R+M+
Subjt:  WPSGRHDKLISIDEENILLWSLDCSRKAAQVQSK---ESAGMLHYLSGGTWDP-HDSNAIAATSESSVQLWDLRTMK

Q5XJP1 EARP-interacting protein homolog5.3e-1529.55Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS-TGEN---FGAAIWQIPELY---------GELNSPQ-LERVTSLDEHA-SKINCVLW
        +H+I      + +    L     EIW ++  P D+ + +T ++ T E+     AA+W++P  +            N+PQ LE +  LD  A   + CVLW
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS-TGEN---FGAAIWQIPELY---------GELNSPQ-LERVTSLDEHA-SKINCVLW

Query:  WPSGRHDKLISIDEENILLWSLDCSRKAAQVQSK---ESAGMLHYLSGGTWDP-HDSNAIAATSESSVQLWDLRTM
         P G   ++IS+ E ++LLW L  S   A + S    E  G L + + G W P H+   +A  ++++++ WDLR+M
Subjt:  WPSGRHDKLISIDEENILLWSLDCSRKAAQVQSK---ESAGMLHYLSGGTWDP-HDSNAIAATSESSVQLWDLRTM

Q6NPN9 WD repeat-containing protein DWA24.9e-6975.32Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHL+RLSS GSEL+CEGLFSHPNEIWDLAS PFDQRIFSTVFSTG+++GAAIWQIPE YG+ NS  LE V SLD H  KINCVLW PSG  DKLIS+DE+
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        N++ WSLD S+K+A+V SKESAGM H LSGG W+PHD N++AATSESS+Q WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

Q86A97 EARP-interacting protein homolog3.1e-1528Show/hide
Query:  SSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFST----------------------GENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVL
        +  G  + C  +F HP EI  + SCPFD  +F +V++T                        +F +++W+I E     +   +E +  L  H   I  +L
Subjt:  SSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFST----------------------GENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVL

Query:  WWPSGRHDKLISIDEENILLWS-LDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
          PSG ++ +IS+D+ NI LWS +D   +   +   +  G L  LS G+ +P+ SN +A  ++ +++ WD R  K
Subjt:  WWPSGRHDKLISIDEENILLWS-LDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

Arabidopsis top hitse value%identityAlignment
AT1G20540.1 Transducin/WD40 repeat-like superfamily protein3.3e-8186.08Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHL+RLSS GSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGE+FGAAIWQIPELYG+LNSPQLERV SLD H  KINCVLWWPSGR DKLISIDE+
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        NI LWSLDCS+K+A+V SK+SAGMLH LSGG WDPHD NA+AAT ESSVQ WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK

AT1G76260.1 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 23.4e-7075.32Show/hide
Query:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE
        VHL+RLSS GSEL+CEGLFSHPNEIWDLAS PFDQRIFSTVFSTG+++GAAIWQIPE YG+ NS  LE V SLD H  KINCVLW PSG  DKLIS+DE+
Subjt:  VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEE

Query:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK
        N++ WSLD S+K+A+V SKESAGM H LSGG W+PHD N++AATSESS+Q WDLRTMK
Subjt:  NILLWSLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGCATTTGATTCGTCTTTCATCGAGTGGATCCGAGCTCATATGCGAAGGTTTGTTCTCTCACCCCAATGAGATCTGGGACCTGGCGTCTTGCCCCTTCGACCAG
CGCATTTTCTCTACCGTCTTCTCCACTGGTGAAAACTTTGGGGCAGCAATATGGCAAATCCCTGAGTTATATGGTGAATTGAATTCTCCTCAGTTGGAACGGGTT
ACATCACTTGATGAACATGCTAGTAAGATCAATTGTGTTCTTTGGTGGCCATCTGGAAGGCATGATAAGCTGATCAGCATTGATGAGGAAAATATTTTACTATGG
AGCTTGGATTGTTCAAGAAAAGCTGCTCAGGTACAATCGAAGGAGTCAGCTGGGATGCTTCATTATTTGTCTGGAGGGACGTGGGATCCACATGATTCAAATGCT
ATTGCAGCAACTAGTGAATCATCCGTTCAACTTTGGGATTTAAGGACAATGAAGTATGCCATCATTTATGCTTTATGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
GTGCATTTGATTCGTCTTTCATCGAGTGGATCCGAGCTCATATGCGAAGGTTTGTTCTCTCACCCCAATGAGATCTGGGACCTGGCGTCTTGCCCCTTCGACCAG
CGCATTTTCTCTACCGTCTTCTCCACTGGTGAAAACTTTGGGGCAGCAATATGGCAAATCCCTGAGTTATATGGTGAATTGAATTCTCCTCAGTTGGAACGGGTT
ACATCACTTGATGAACATGCTAGTAAGATCAATTGTGTTCTTTGGTGGCCATCTGGAAGGCATGATAAGCTGATCAGCATTGATGAGGAAAATATTTTACTATGG
AGCTTGGATTGTTCAAGAAAAGCTGCTCAGGTACAATCGAAGGAGTCAGCTGGGATGCTTCATTATTTGTCTGGAGGGACGTGGGATCCACATGATTCAAATGCT
ATTGCAGCAACTAGTGAATCATCCGTTCAACTTTGGGATTTAAGGACAATGAAGTATGCCATCATTTATGCTTTATGTTTTTGA
Protein sequenceShow/hide protein sequence
VHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGENFGAAIWQIPELYGELNSPQLERVTSLDEHASKINCVLWWPSGRHDKLISIDEENILLW
SLDCSRKAAQVQSKESAGMLHYLSGGTWDPHDSNAIAATSESSVQLWDLRTMKYAIIYALCF