CuGenDBv2

Gene ID	ClCG08G009600
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	NADH-ubiquinone oxidoreductase chain 5
Genome location	CG_Chr08:22246331..22248340
RNA-Seq Expression	ClCG08G009600
Synteny	ClCG08G009600
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG5246566.1 NADH-ubiquinone oxidoreductase chain [Salix suchowensis]

1.5e-41

93.4

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Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
        MITRSNLV+QLREYQIRSKH+WASVSFFSSTSN+SSSRVDVV+FVIWEL I++FLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

XP_004144225.1 uncharacterized protein LOC101213289 [Cucumis sativus]

3.6e-43

98.11

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Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNI+SSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCIT+LLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

XP_008464874.1 PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]

3.6e-43

98.11

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Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNI+SSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCIT+LLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

XP_022153105.1 uncharacterized protein LOC111020687 [Momordica charantia]

8.1e-43

97.17

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Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNI+SSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQLAFILVCIT+LLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

XP_038884232.1 uncharacterized protein LOC120075129 [Benincasa hispida]

3.6e-43

98.11

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Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNI+SSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCIT+LLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KIH9 Uncharacterized protein

1.8e-43

98.11

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Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNI+SSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCIT+LLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

A0A1S3CMK7 uncharacterized protein LOC103502637 isoform X1

1.8e-43

98.11

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Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNI+SSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCIT+LLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

A0A6J1DFV1 uncharacterized protein LOC111020687

3.9e-43

97.17

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Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
        MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNI+SSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQLAFILVCIT+LLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

A0A6N2LNL3 Uncharacterized protein

7.4e-42

93.4

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Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
        MITRSNLV+QLREYQIRSKH+WASVSFFSSTSN+SSSRVDVV+FVIWEL I++FLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

A0A6P6AWR8 uncharacterized protein LOC111312883 isoform X1

7.4e-42

92.45

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Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN++SSRVDVV+FVIWELIIL+FLVFSAVSLYFRHMQLAFILVCIT+LLLLCMK+TKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G20460.1 unknown protein

1.7e-43

88.68

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Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN SSSRVDVV+FVIWEL+IL+F VFSAVSLYF+ +QLAFILVC+TLLLL+CMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

AT1G76185.1 unknown protein

7.3e-42

85.85

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Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN SSSRVDVV+FVIWEL++L+ +VFSAVSLYFR +QLAFIL+C+TLLLLLCMK+TKQVR ARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

Sequences

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CDS sequence

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ATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAGCACGAGTGGGCTTCCGTCTCCTTCTTCTCTTCTACCTCCAATATTTCATCCTC
CAGGGTGGATGTAGTGATTTTTGTAATATGGGAACTCATAATTCTATCCTTCTTGGTGTTTTCGGCCGTTTCTTTATATTTTCGGCATATGCAGTTGGCTTTTATTTTAG
TATGCATCACGTTGTTATTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGA

mRNA sequence

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TCTCCTCCGTCGCCCTTCCTCCCTTGAGGCAAAGAAAAGAAGGTCTCGGGGTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGAT
CCAAGCACGAGTGGGCTTCCGTCTCCTTCTTCTCTTCTACCTCCAATATTTCATCCTCCAGGGTGGATGTAGTGATTTTTGTAATATGGGAACTCATAATTCTATCCTTC
TTGGTGTTTTCGGCCGTTTCTTTATATTTTCGGCATATGCAGTTGGCTTTTATTTTAGTATGCATCACGTTGTTATTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAG
ATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGAAAATCTGATAGTAGAAGGAGAGATATACTAAACTTTTTTTATTTTCT

Protein sequence

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MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITLLLLLCMKVTKQVRLARKKKRRMLLPLSM

ClCG08G009600 (gene) of Watermelon (Charleston Gray) v2.5 genome