CuGenDBv2

Gene ID	ClCG08G009640
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	CX9C domain-containing protein
Genome location	CG_Chr08:22311872..22315632
RNA-Seq Expression	ClCG08G009640
Synteny	ClCG08G009640
Gene Ontology terms	GO:0032543 - mitochondrial translation (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR009069 - Cysteine alpha-hairpin motif superfamily IPR017264 - Ribosomal protein MRP10, mitochondrial IPR031731 - IMS import disulfide relay-system, CHCH-CHCH-like Cx9C

Homology

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GenBank top hits

e value

%identity

Alignment

XP_021278827.1 uncharacterized protein LOC110412585 isoform X1 [Herrania umbratica]

5.8e-33

80.95

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Query:  QSVPMGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK
        +S  MG+KAG LY+NPKKF ++SKPCMKEM+SFLNC++LN NNDDKC RQKDLL+ CMDAQSNKNRKPWGSINYHLQRLNRGRK
Subjt:  QSVPMGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK

XP_022157440.1 uncharacterized protein LOC111024138 [Momordica charantia]

1.5e-33

86.25

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Query:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK
        MGRKAG+LY+NPKKF  +SKPCMKEM+SFLNCIALN NNDDKCTR K+LLNTCMDAQSN+NRKPWGSINYHLQRL+RGRK
Subjt:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK

XP_022157885.1 uncharacterized protein LOC111024495 isoform X1 [Momordica charantia]

9.0e-34

85.37

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Query:  VPMGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK
        V MGRKAG+LY+NPKKF  +SKPCMKEM+SFLNCIALN NNDDKCTR K+LLNTCMDAQSN+NRKPWGSINYHLQRL+RGRK
Subjt:  VPMGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK

XP_022946561.1 uncharacterized protein LOC111450585 [Cucurbita moschata]

2.0e-33

83.75

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Query:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK
        MGRKAG+LY+NPKKF  +SKPCMKEM+SFLNC+ALNHNND+KCTR K++LNTCMDAQSN+NRKPWGSINYHLQRL+RGRK
Subjt:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK

XP_022999786.1 uncharacterized protein LOC111494031 [Cucurbita maxima]

1.2e-33

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Query:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK
        MGRKAG+LY+NPKKF  +SKPCMKEM+SFLNC+ALNHNND+KCTR K+LLNTCMDAQSN+NRKPWGSINYHLQRL+RGRK
Subjt:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KD09 CX9C domain-containing protein

9.7e-34

78.41

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Query:  VRRNQSVPMGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK
        +R   SV MGRKAGSL++NPKKF N++KPCMKEMVSFLNCIALN NND+KCTR K+LLNTCMDAQ+ +++KPWGSINYHLQRLNRGRK
Subjt:  VRRNQSVPMGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK

A0A6J1DU96 uncharacterized protein LOC111024495 isoform X1

4.3e-34

85.37

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Query:  VPMGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK
        V MGRKAG+LY+NPKKF  +SKPCMKEM+SFLNCIALN NNDDKCTR K+LLNTCMDAQSN+NRKPWGSINYHLQRL+RGRK
Subjt:  VPMGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK

A0A6J1DVQ0 uncharacterized protein LOC111024138

7.4e-34

86.25

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Query:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK
        MGRKAG+LY+NPKKF  +SKPCMKEM+SFLNCIALN NNDDKCTR K+LLNTCMDAQSN+NRKPWGSINYHLQRL+RGRK
Subjt:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK

A0A6J1G420 uncharacterized protein LOC111450585

9.7e-34

83.75

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Query:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK
        MGRKAG+LY+NPKKF  +SKPCMKEM+SFLNC+ALNHNND+KCTR K++LNTCMDAQSN+NRKPWGSINYHLQRL+RGRK
Subjt:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK

A0A6J1KBS0 uncharacterized protein LOC111494031

5.7e-34

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Query:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK
        MGRKAG+LY+NPKKF  +SKPCMKEM+SFLNC+ALNHNND+KCTR K+LLNTCMDAQSN+NRKPWGSINYHLQRL+RGRK
Subjt:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G47278.1 unknown protein

9.3e-29

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Query:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK
        MGRKAG+LY+NPKK  N++KPCMKEMVSFLNC+ALN+  DDKC +QK LL+ CM  QS+   K WG+INYHLQRL RGRK
Subjt:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK

AT1G47278.2 unknown protein

9.3e-29

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Query:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK
        MGRKAG+LY+NPKK  N++KPCMKEMVSFLNC+ALN+  DDKC +QK LL+ CM  QS+   K WG+INYHLQRL RGRK
Subjt:  MGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNTCMDAQSNKNRKPWGSINYHLQRLNRGRK

Sequences

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CDS sequence

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ATGAAAACACGACCAGCGGAGGCGGCAACAACTACTGCCAACGGCGTAGCGTTACATCCCTACCTGGTCTTTCTCTTCCTGCCTTCGCTTCGGCTACGACATCCCCTCGT
TTACCCACGACTCCAGTCTTCTTTAGACCCGAAAATCACAGTTCGTAGAAACCAGTCTGTACCAATGGGTAGGAAAGCTGGTTCTTTATACATGAACCCAAAGAAGTTTA
GCAATATTAGCAAACCTTGCATGAAGGAGATGGTATCATTTCTCAATTGCATAGCTCTTAATCACAACAACGATGATAAGTGCACCAGACAAAAGGATCTTCTGAATACT
TGTATGGATGCTCAGTCCAACAAAAACAGGAAACCCTGGGGTAGCATTAATTATCACTTGCAGAGGCTCAACAGGGGAAGAAAATAG

mRNA sequence

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Protein sequence

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MKTRPAEAATTTANGVALHPYLVFLFLPSLRLRHPLVYPRLQSSLDPKITVRRNQSVPMGRKAGSLYMNPKKFSNISKPCMKEMVSFLNCIALNHNNDDKCTRQKDLLNT
CMDAQSNKNRKPWGSINYHLQRLNRGRK

ClCG08G009640 (gene) of Watermelon (Charleston Gray) v2.5 genome