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ClCG08G009690 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G009690
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNADH dehydrogenase subunit 7
Genome locationCG_Chr08:22397946..22399979
RNA-Seq ExpressionClCG08G009690
SyntenyClCG08G009690
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016651 - oxidoreductase activity, acting on NAD(P)H (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051287 - NAD binding (molecular function)
InterPro domainsIPR001135 - NADH-quinone oxidoreductase, subunit D
IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H
IPR029014 - [NiFe]-hydrogenase, large subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE5979331.1 unnamed protein product [Arabidopsis arenosa]2.1e-1184Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVK
        NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII  ++    VAVK
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVK

CAF2074996.1 unnamed protein product [Brassica napus]2.8e-1146.43Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLA--SRRQPWKFINFSLSRV-
        NGSN PYRRKIRAPG AHSQGLDSMSKHHMPADVVTII  ++      V ++R             VV P  ++ LL +    SRR+ W+  +    RV 
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLA--SRRQPWKFINFSLSRV-

Query:  -LYFIDDLNASA
          +  DD+  S+
Subjt:  -LYFIDDLNASA

GEV75756.1 cytochrome c biogenesis FN1, mitochondrial [Tanacetum cinerariifolium]2.8e-1174.07Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVKVERE
        NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII   +  +   V+ ++E
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVKVERE

GEX25613.1 NADH dehydrogenase subunit 7, mitochondrial [Tanacetum cinerariifolium]1.6e-1195.12Show/hide
Query:  RNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIES
        RNGSNRPYRRKIRAPGSAH QGLDSMSKHHMPADVVTIIE+
Subjt:  RNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIES

YP_009526550.1 NADH dehydrogenase subunit 7 [Ammopiptanthus mongolicus]1.2e-1192.86Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLS
        NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII++ S
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLS

TrEMBL top hitse value%identityAlignment
A0A0D2ZTM9 Complex1_49kDa domain-containing protein1.3e-1146.43Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLA--SRRQPWKFINFSLSRV-
        NGSN PYRRKIRAPG AHSQGLDSMSKHHMPADVVTII  ++      V ++R             VV P  ++ LL +    SRR+ W+  +    RV 
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLA--SRRQPWKFINFSLSRV-

Query:  -LYFIDDLNASA
          +  DD+  S+
Subjt:  -LYFIDDLNASA

A0A251UZT8 Putative niFe hydrogenase-like protein2.3e-11100Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
        NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII

A0A385G282 NADH dehydrogenase subunit 76.0e-1292.86Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLS
        NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII++ S
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLS

A0A3P6GFR2 Complex1_49kDa domain-containing protein1.3e-1146.43Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLA--SRRQPWKFINFSLSRV-
        NGSNRPYRRKIRAPG AHSQGLDSMSKHHMPADVVTII  ++      V V+R             VV P  ++ L+ +    S+R+ W+  +    RV 
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLA--SRRQPWKFINFSLSRV-

Query:  -LYFIDDLNASA
          +  DD+  S+
Subjt:  -LYFIDDLNASA

E9KZN6 NADH dehydrogenase subunit 72.3e-11100Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
        NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII

SwissProt top hitse value%identityAlignment
A8GX80 NADH-quinone oxidoreductase subunit D5.6e-0767.5Show/hide
Query:  GSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESL
        G NRPYR +I+APG AH QGLD MSK H+ ADV+TII +L
Subjt:  GSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESL

P93306 NADH dehydrogenase [ubiquinone] iron-sulfur protein 29.3e-1086.84Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
        NGSNRPYR KIRAPG AH QGLD MSKHHM ADVVTII
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII

Q36450 NADH dehydrogenase [ubiquinone] iron-sulfur protein 23.4e-1294.74Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
        NGSNRPYRRKIRAP  AHSQGLDSMSKHHMPADVVTII
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII

Q37619 NADH-ubiquinone oxidoreductase 49 kDa subunit5.6e-0771.05Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
        NG+++PYR KIRAPG AH QGLD M+++HM ADVVTII
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII

Q9TC96 NADH dehydrogenase [ubiquinone] iron-sulfur protein 23.9e-0878.95Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
        NG+NRPYR KIRAPG  H QGLD MSK+HM ADVVTII
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII

Arabidopsis top hitse value%identityAlignment
AT1G55200.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain2.8e-0954.55Show/hide
Query:  SEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLAS---RRQPWKFINFS
        +EKV VAVK  RE+SK A VWALTH+V PGD ITL+ ++ S    R+ W F  F+
Subjt:  SEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLAS---RRQPWKFINFS

AT3G13690.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain1.4e-0845.76Show/hide
Query:  IIESLSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLASRRQPWKFINFSLS
        ++   ++KV VAVK  RE+ K A++WALTHVV+PGD ITL+ ++ S     K   F+ S
Subjt:  IIESLSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLASRRQPWKFINFSLS

AT5G56790.1 Protein kinase superfamily protein5.8e-0744.64Show/hide
Query:  LSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLASR---RQPWKFINFS
        + +KV VAV+  +E+ KAA++W LTHVV+PGD I LL ++ S    ++ W F  F+
Subjt:  LSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLASR---RQPWKFINFS

ATMG00510.1 NADH dehydrogenase subunit 74.4e-15100Show/hide
Query:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
        NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII
Subjt:  NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGGGCTCGGAAAAATAACGAGAATCGTAATGGAAGCAATCGTCCTTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTC
CAAACATCACATGCCAGCGGATGTGGTCACCATCATAGAAAGCCTCTCGGAGAAAGTTTTTGTCGCCGTTAAAGTCGAGAGAGAAGTCTCTAAAGCCGCTATGGTCTGGG
CTCTCACTCACGTCGTCCGTCCTGGGGACTCTATTACGCTGCTCGCCCTATTAGCTAGCCGGCGGCAACCGTGGAAATTCATTAATTTCAGCCTGTCTCGGGTTCTCTAT
TTCATTGATGATCTCAATGCTTCTGCTGTATATGGATCGTTCATTCCCTTTAGTTATAAGCCTGTTGAGGATGAGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGGGCTCGGAAAAATAACGAGAATCGTAATGGAAGCAATCGTCCTTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTC
CAAACATCACATGCCAGCGGATGTGGTCACCATCATAGAAAGCCTCTCGGAGAAAGTTTTTGTCGCCGTTAAAGTCGAGAGAGAAGTCTCTAAAGCCGCTATGGTCTGGG
CTCTCACTCACGTCGTCCGTCCTGGGGACTCTATTACGCTGCTCGCCCTATTAGCTAGCCGGCGGCAACCGTGGAAATTCATTAATTTCAGCCTGTCTCGGGTTCTCTAT
TTCATTGATGATCTCAATGCTTCTGCTGTATATGGATCGTTCATTCCCTTTAGTTATAAGCCTGTTGAGGATGAGAGGTGA
Protein sequenceShow/hide protein sequence
MGGARKNNENRNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIESLSEKVFVAVKVEREVSKAAMVWALTHVVRPGDSITLLALLASRRQPWKFINFSLSRVLY
FIDDLNASAVYGSFIPFSYKPVEDER