CuGenDBv2

Gene ID	ClCG08G010010
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	leucine-rich repeat extensin-like protein 3
Genome location	CG_Chr08:22796499..22797065
RNA-Seq Expression	ClCG08G010010
Synteny	ClCG08G010010
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064726.1 classical arabinogalactan protein 9-like [Cucumis melo var. makuwa]

6.2e-70

82.72

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Query:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS
        MEHFSKTLHFSS+ ILLI  L G   AA EDGRVV+VVPPVSLLCISECSTCPTICAPPPPPP   V KSPPPVPHVPPLAYFPLNSPPPR T SPPPPS
Subjt:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS

Query:  PSPPPPAAVA---SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFFWGLFLFQLMLLS
        PSPPPP A A   SSHSPPPPAF+YYFNLPPPPPVLIPVPVPP+ TAAP GNTN+NAYNYYFYAP SSS  PSLP AFFWGLFLF L+L S
Subjt:  PSPPPPAAVA---SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFFWGLFLFQLMLLS

XP_008445508.1 PREDICTED: classical arabinogalactan protein 9-like [Cucumis melo]

7.9e-65

83.24

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Query:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS
        MEHFSKTLHFSS+ ILLI  L G   AA EDGRVV+VVPPVSLLCISECSTCPTICAPPPPPP   V KSPPPVPHVPPLAYFPLNSPPPR T SPPPPS
Subjt:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS

Query:  PSPPPPAAVA---SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFF
        PSPPPP A A   SSHSPPPPAF+YYFNLPPPPPVLIPVPVPP+ TAAP GNTN+NAYNYYFYAP SSS  PSLP AFF
Subjt:  PSPPPPAAVA---SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFF

XP_011657382.1 extensin [Cucumis sativus]

1.3e-70

82.2

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Query:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS
        MEHFSKTLHFSS+ ILLI  L     A  EDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPP +V KSPPPVPHVPPLAYFPLNSPPPR T SPPPP 
Subjt:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS

Query:  PSPPPPAAVA---SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFFWGLFLFQLMLLS
        PSPPPP A A   SSHSPPPPAF+YYFNLPPPPPVLIPVPVPP+ TA PHGNTN+NAYNYYFYAP SSS  PSLP A FWGLFLF LML S
Subjt:  PSPPPPAAVA---SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFFWGLFLFQLMLLS

XP_022132157.1 leucine-rich repeat extensin-like protein 3 [Momordica charantia]

5.8e-52

70.31

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Query:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSP----PPRQTPSP
        MEHF +  HFS L ILLI  L GA AAA+ED R+VEVVPPVSLLCISECSTCP IC+PPPPP   +  KSPP  PH PPLAY PLN+P    PPR TPSP
Subjt:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSP----PPRQTPSP

Query:  PPPSPSPPPPAAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLFLFQLMLLSSW
         PP P PP P   A SH PPPPAF YYFNLPPPPPVLIPVPVPP  TAAPHGNTN+NAYNYYFYA  SSS SLPA +   LF+FQ M  S W
Subjt:  PPPSPSPPPPAAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLFLFQLMLLSSW

XP_022951103.1 extensin-3-like [Cucurbita moschata]

2.8e-46

69.73

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Query:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS
        MEH + T  F   FILLI HL GA A A+++ R+VEVVPPVSLLCISECSTCP ICA  PPPPP V  KSPPPVPH PP+A FPLN P     PSPP PS
Subjt:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS

Query:  PSPPPP--AAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLFLFQLM
        PSPPPP     ASSHSPPPPAFKYYF+LPPPPPVLIP P+PPT TAAPHG  NTNAYNYYFYA  S S + P  F W LFLF L+
Subjt:  PSPPPP--AAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLFLFQLM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KD44 Uncharacterized protein

6.1e-71

82.2

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Query:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS
        MEHFSKTLHFSS+ ILLI  L     A  EDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPP +V KSPPPVPHVPPLAYFPLNSPPPR T SPPPP 
Subjt:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS

Query:  PSPPPPAAVA---SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFFWGLFLFQLMLLS
        PSPPPP A A   SSHSPPPPAF+YYFNLPPPPPVLIPVPVPP+ TA PHGNTN+NAYNYYFYAP SSS  PSLP A FWGLFLF LML S
Subjt:  PSPPPPAAVA---SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFFWGLFLFQLMLLS

A0A1S3BCX5 classical arabinogalactan protein 9-like

3.8e-65

83.24

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Query:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS
        MEHFSKTLHFSS+ ILLI  L G   AA EDGRVV+VVPPVSLLCISECSTCPTICAPPPPPP   V KSPPPVPHVPPLAYFPLNSPPPR T SPPPPS
Subjt:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS

Query:  PSPPPPAAVA---SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFF
        PSPPPP A A   SSHSPPPPAF+YYFNLPPPPPVLIPVPVPP+ TAAP GNTN+NAYNYYFYAP SSS  PSLP AFF
Subjt:  PSPPPPAAVA---SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFF

A0A5A7VEH7 Classical arabinogalactan protein 9-like

3.0e-70

82.72

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Query:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS
        MEHFSKTLHFSS+ ILLI  L G   AA EDGRVV+VVPPVSLLCISECSTCPTICAPPPPPP   V KSPPPVPHVPPLAYFPLNSPPPR T SPPPPS
Subjt:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS

Query:  PSPPPPAAVA---SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFFWGLFLFQLMLLS
        PSPPPP A A   SSHSPPPPAF+YYFNLPPPPPVLIPVPVPP+ TAAP GNTN+NAYNYYFYAP SSS  PSLP AFFWGLFLF L+L S
Subjt:  PSPPPPAAVA---SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFFWGLFLFQLMLLS

A0A6J1BT26 leucine-rich repeat extensin-like protein 3

2.8e-52

70.31

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Query:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSP----PPRQTPSP
        MEHF +  HFS L ILLI  L GA AAA+ED R+VEVVPPVSLLCISECSTCP IC+PPPPP   +  KSPP  PH PPLAY PLN+P    PPR TPSP
Subjt:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSP----PPRQTPSP

Query:  PPPSPSPPPPAAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLFLFQLMLLSSW
         PP P PP P   A SH PPPPAF YYFNLPPPPPVLIPVPVPP  TAAPHGNTN+NAYNYYFYA  SSS SLPA +   LF+FQ M  S W
Subjt:  PPPSPSPPPPAAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLFLFQLMLLSSW

A0A6J1GGS2 extensin-3-like

1.4e-46

69.73

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Query:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS
        MEH + T  F   FILLI HL GA A A+++ R+VEVVPPVSLLCISECSTCP ICA  PPPPP V  KSPPPVPH PP+A FPLN P     PSPP PS
Subjt:  MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPS

Query:  PSPPPP--AAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLFLFQLM
        PSPPPP     ASSHSPPPPAFKYYF+LPPPPPVLIP P+PPT TAAPHG  NTNAYNYYFYA  S S + P  F W LFLF L+
Subjt:  PSPPPP--AAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLFLFQLM

SwissProt top hits

e value

%identity

Alignment

Q9T0K5 Leucine-rich repeat extensin-like protein 3

2.8e-04

40.98

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Query:  PPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTP----SPPPPSPSPPPPAAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTN
        PPPPPPP V    PPP P  PP  Y P   PPP   P    SPPPPSP PPPP   +    PPPP     ++ PPPPPV    P PP+    P   T   
Subjt:  PPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTP----SPPPPSPSPPPPAAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTN

Query:  AYNYYFYAPTSSSPSLPAAFFW
            +   P   SP  P  +++
Subjt:  AYNYYFYAPTSSSPSLPAAFFW

Arabidopsis top hits

e value

%identity

Alignment

AT4G13340.1 Leucine-rich repeat (LRR) family protein

2.0e-05

40.98

Show/hide

Query:  PPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTP----SPPPPSPSPPPPAAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTN
        PPPPPPP V    PPP P  PP  Y P   PPP   P    SPPPPSP PPPP   +    PPPP     ++ PPPPPV    P PP+    P   T   
Subjt:  PPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTP----SPPPPSPSPPPPAAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTN

Query:  AYNYYFYAPTSSSPSLPAAFFW
            +   P   SP  P  +++
Subjt:  AYNYYFYAPTSSSPSLPAAFFW

AT5G11990.1 proline-rich family protein

8.0e-07

40.44

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Query:  ILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP--PPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPPAAVASS
        I++I  L      A+       V+ P   LCISECSTCPTIC+PPP  P P M    SPPP P +P  +  P   PPP    SPPP S S  PP  +   
Subjt:  ILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP--PPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPPAAVASS

Query:  HSPPPPAFKYYFNLPPPPPVLIP-----VPVPPTGTAAPHGNTNTN---AYNY-YFYAPTSSSPSLPAAFFWGLFLFQLMLLS
        H PPPP F YYF   PPPP L P      P  P+   +P G +       Y + YFY  T+S+ +L    F   FL  L++ S
Subjt:  HSPPPPAFKYYFNLPPPPPVLIP-----VPVPPTGTAAPHGNTNTN---AYNY-YFYAPTSSSPSLPAAFFWGLFLFQLMLLS

Sequences

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CDS sequence

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ATGGAACATTTCTCCAAAACCCTTCATTTCTCTTCCCTTTTCATTCTTCTCATCTTCCACCTCACCGGAGCTACGGCAGCTGCGGCCGAAGATGGCCGTGTGGTCGAGGT
GGTTCCTCCGGTTAGCCTTCTTTGTATTAGCGAATGTTCAACTTGCCCCACCATATGTGCGCCGCCGCCGCCGCCGCCGCCCATGGTGGTGCCCAAGTCACCGCCACCGG
TGCCCCATGTGCCACCACTGGCTTACTTCCCACTCAATTCACCCCCACCTCGACAAACCCCATCTCCACCGCCGCCGTCGCCGTCGCCACCACCGCCGGCGGCGGTGGCT
TCATCTCATTCCCCGCCGCCTCCCGCATTCAAATATTATTTCAATTTGCCACCACCGCCGCCGGTGCTGATTCCAGTACCTGTGCCGCCGACCGGCACGGCGGCGCCTCA
TGGAAATACGAATACTAATGCTTATAATTACTACTTTTACGCTCCGACATCGTCTTCTCCGTCTCTTCCGGCGGCGTTTTTCTGGGGTCTGTTTCTCTTCCAGTTGATGT
TGTTGTCTTCATGGTGA

mRNA sequence

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Protein sequence

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MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPPAAVA
SSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLFLFQLMLLSSW

ClCG08G010010 (gene) of Watermelon (Charleston Gray) v2.5 genome