; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG08G010060 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G010060
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTranscription and mRNA export factor ENY2
Genome locationCG_Chr08:22828391..22832892
RNA-Seq ExpressionClCG08G010060
SyntenyClCG08G010060
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0006996 - organelle organization (biological process)
GO:0015031 - protein transport (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005643 - nuclear pore (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR018783 - Transcription factor, enhancer of yellow 2
IPR038212 - Transcription factor EnY2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445505.1 PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo]4.4e-1863.44Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI
        LIESGEKERLKELLRERLIECGWKDEMKALC                             RAYVRKKGRNNVSVDDLVQVITPKGR S   S+
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI

XP_011657386.1 transcription and mRNA export factor ENY2 [Cucumis sativus]4.4e-1863.44Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI
        LIESGEKERLKELLRERLIECGWKDEMKALC                             RAYVRKKGRNNVSVDDLVQVITPKGR S   S+
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI

XP_016899913.1 PREDICTED: transcription and mRNA export factor SUS1 isoform X1 [Cucumis melo]2.6e-1866.67Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRG
        LIESGEKERLKELLRERLIECGWKDEMKALC                             RAYVRKKGRNNVSVDDLVQVITPKGRG
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRG

XP_038884208.1 transcription and mRNA export factor ENY2 [Benincasa hispida]4.4e-1863.44Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI
        LIESGEKERLKELLRERLIECGWKDEMKALC                             RAYVRKKGRNNVSVDDLVQVITPKGR S   S+
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI

XP_039047454.1 transcription and mRNA export factor ENY2-like isoform X1 [Hibiscus syriacus]3.4e-1860.23Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGS
        LIESGEKERL ELLRERLI+CGWKDEMKA+C L         ++    + K  V+   I  AY++KKGRNNV+VDDLV +ITPKGR S
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGS

TrEMBL top hitse value%identityAlignment
A0A0A0KIM7 Transcription and mRNA export factor ENY22.1e-1863.44Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI
        LIESGEKERLKELLRERLIECGWKDEMKALC                             RAYVRKKGRNNVSVDDLVQVITPKGR S   S+
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI

A0A1S4DVB5 Transcription and mRNA export factor ENY21.3e-1866.67Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRG
        LIESGEKERLKELLRERLIECGWKDEMKALC                             RAYVRKKGRNNVSVDDLVQVITPKGRG
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRG

A0A6J1BSW0 Transcription and mRNA export factor ENY22.1e-1863.44Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI
        LIESGEKERLKELLRERLIECGWKDEMKALC                             RAYVRKKGRNNVSVDDLVQVITPKGR S   S+
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI

A0A6J1GGQ4 Transcription and mRNA export factor ENY22.1e-1863.44Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI
        LIESGEKERLKELLRERLIECGWKDEMKALC                             RAYVRKKGRNNVSVDDLVQVITPKGR S   S+
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI

A0A6J1KQ41 Transcription and mRNA export factor ENY22.1e-1863.44Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI
        LIESGEKERLKELLRERLIECGWKDEMKALC                             RAYVRKKGRNNVSVDDLVQVITPKGR S   S+
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI

SwissProt top hitse value%identityAlignment
Q3ZBJ0 Transcription and mRNA export factor ENY24.2e-1140.59Show/hide
Query:  RFKKQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKG
        +  K +  R+A+   LIE+GE+ERLKELLR +LIECGWKD++KA C                             +  +++KG  +V+VDDLV  ITPKG
Subjt:  RFKKQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKG

Query:  R
        R
Subjt:  R

Q6DH42 Transcription and mRNA export factor ENY21.4e-1141.84Show/hide
Query:  KQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGR
        K+S  R+A+   LIE GE+ERLKELLR +LIECGW+D++KALC                             +  +++KG  NV+V+DLV  +TPKGR
Subjt:  KQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGR

Q6NQ54 Transcription and mRNA export factor ENY24.5e-1344.09Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI
        L+ESGEKE L EL+R+RL+ECGWKDEM+  C                             R +V+KKGR +V+VD+L++VITPKGR S   S+
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI

Q9JIX0 Transcription and mRNA export factor ENY24.2e-1140.59Show/hide
Query:  RFKKQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKG
        +  K +  R+A+   LIE+GE+ERLKELLR +LIECGWKD++KA C                             +  +++KG  +V+VDDLV  ITPKG
Subjt:  RFKKQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKG

Query:  R
        R
Subjt:  R

Q9NPA8 Transcription and mRNA export factor ENY24.2e-1140.59Show/hide
Query:  RFKKQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKG
        +  K +  R+A+   LIE+GE+ERLKELLR +LIECGWKD++KA C                             +  +++KG  +V+VDDLV  ITPKG
Subjt:  RFKKQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKG

Query:  R
        R
Subjt:  R

Arabidopsis top hitse value%identityAlignment
AT3G27100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).3.2e-1444.09Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI
        L+ESGEKE L EL+R+RL+ECGWKDEM+  C                             R +V+KKGR +V+VD+L++VITPKGR S   S+
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSI

AT3G27100.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1.9e-1441.9Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRG------SFSLSIL
        L+ESGEKE L EL+R+RL+ECGWKDEM+  C                             R +V+KKGR +V+VD+L++VITPKGRG      S S+S+ 
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRG------SFSLSIL

Query:  EVVAT
         ++ T
Subjt:  EVVAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTAATTCTTCAAGCTTCACTCCATGGCTATAATTGCCATGCCCTAATTTGTGCTGCGACAGGAGGGCTTCTATTAATCGGCCTCCGACACCTGAACCGGAGGAT
GATCGAGATCACCACCCCACGTTTCAAGAAACAATCAACATCAAGGTCTGCAGTTTATTCGCTGATTGAAAGTGGCGAAAAAGAGCGGTTGAAGGAGCTCTTGAGAGAAA
GGCTGATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGTCTTTCAACTGGAGCTGTGCTATATGCTCGTATTAATTCTTTCATTCCCGAGGCTAAGACTTTT
GTATATCCCTATTGCATCTTCAGGGCATATGTACGGAAGAAAGGAAGGAACAATGTTAGTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGGTTCGTTCTC
ACTTTCCATTTTAGAAGTGGTTGCTACTGATTCATGTGCTCACCACATACCTGAAACCTCGATGGCTATTACCCCGAAAGCCTACATTGGAAGAATTCCTTNAAGTGGCG
AAAAAGAGCGGTTGAAGGAGCTCTTGAGAGAAAGGCTGATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGTCTTTCAACTGGAGCTGTGCTATATGCTCGT
ATTAATTCTTTCATTCCCGAGGCTAAGACTTTTGTATATCCCTATTGCATCTTCAGGGCATATGTACGGAAGAAAGGAAGGAACAATGTTAGTGTTGATGACCTTGTGCA
GGTCATTACTCCAAAAGGCAGAGTTCAAACGATGTCATTGTCATGTAGCCTCAGTTCCAGATTCTGTGAAAGCCGAGCTGCTGCAACGCATCCGATCTTTCCTTGCATCA
ACAGCCATCTGACATACACGAGATTGACTGCAAGCAGCCGAAAAGTTATAAGGAATGTCGCATTGCGTAAGCTCGCTGTCAACAAAATTCTGCTTGGTGAGTGTTATTGT
AGAATGCATGTAAAAAGCTAG
mRNA sequenceShow/hide mRNA sequence
GTCGTCTCCAGTCAGCTGTTCTCTCGTGTAGTTGGACGCGCTGTGTCGCCGTGAAAGTGAAATTTTTTGAAGAATCTCTAATCATAATCTTTGATATTGAATGTAAGTCT
CTCCTACGTCAGATTTCTGGTCGTCTTTCATCAGATCCTCACTTTAGGAAATTGAAATTTTCGCATCGATGGAGCTAATTCTTCAAGCTTCACTCCATGGCTATAATTGC
CATGCCCTAATTTGTGCTGCGACAGGAGGGCTTCTATTAATCGGCCTCCGACACCTGAACCGGAGGATGATCGAGATCACCACCCCACGTTTCAAGAAACAATCAACATC
AAGGTCTGCAGTTTATTCGCTGATTGAAAGTGGCGAAAAAGAGCGGTTGAAGGAGCTCTTGAGAGAAAGGCTGATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTT
GCAGTCTTTCAACTGGAGCTGTGCTATATGCTCGTATTAATTCTTTCATTCCCGAGGCTAAGACTTTTGTATATCCCTATTGCATCTTCAGGGCATATGTACGGAAGAAA
GGAAGGAACAATGTTAGTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGGTTCGTTCTCACTTTCCATTTTAGAAGTGGTTGCTACTGATTCATGTGCTCA
CCACATACCTGAAACCTCGATGGCTATTACCCCGAAAGCCTACATTGGAAGAATTCCTTNAAGTGGCGAAAAAGAGCGGTTGAAGGAGCTCTTGAGAGAAAGGCTGATTG
AATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGTCTTTCAACTGGAGCTGTGCTATATGCTCGTATTAATTCTTTCATTCCCGAGGCTAAGACTTTTGTATATCCC
TATTGCATCTTCAGGGCATATGTACGGAAGAAAGGAAGGAACAATGTTAGTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGTTCAAACGATGTCATTGTC
ATGTAGCCTCAGTTCCAGATTCTGTGAAAGCCGAGCTGCTGCAACGCATCCGATCTTTCCTTGCATCAACAGCCATCTGACATACACGAGATTGACTGCAAGCAGCCGAA
AAGTTATAAGGAATGTCGCATTGCGTAAGCTCGCTGTCAACAAAATTCTGCTTGGTGAGTGTTATTGTAGAATGCATGTAAAAAGCTAGCTGTATGAGATTTATTTAATA
CTCTCATGATGACAAGTCTGTTCTTACCGAAAATTTGGTCAGTTGTTACTCTTGATTGGGTCTATTTTGATGTATAATTCTATATTTCAATTTGTTCAACTGTTTAGAGC
TGCAACTGTCAGTATCTTATCATCTTCTTTGCTAGTGTTTCTGGGGCTTTCATATATGAAACTAGAAG
Protein sequenceShow/hide protein sequence
MELILQASLHGYNCHALICAATGGLLLIGLRHLNRRMIEITTPRFKKQSTSRSAVYSLIESGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYARINSFIPEAKTF
VYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRGSFSLSILEVVATDSCAHHIPETSMAITPKAYIGRIPXSGEKERLKELLRERLIECGWKDEMKALCSLSTGAVLYAR
INSFIPEAKTFVYPYCIFRAYVRKKGRNNVSVDDLVQVITPKGRVQTMSLSCSLSSRFCESRAAATHPIFPCINSHLTYTRLTASSRKVIRNVALRKLAVNKILLGECYC
RMHVKS