CuGenDBv2

Gene ID	ClCG08G011630
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	TPR_REGION domain-containing protein
Genome location	CG_Chr08:24426909..24427544
RNA-Seq Expression	ClCG08G011630
Synteny	ClCG08G011630
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152601.1 uncharacterized protein LOC101214199 [Cucumis sativus]

2.2e-95

96.68

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST
        QGFKTSALESLDTALSPLVAKSLSDEERGDAL KRAELKMSTNRRALVDSALADLTESV LSQNANSYYWLGKCYE KKLR EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_008444918.1 PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo]

4.3e-96

96.68

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD+
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST
        QGFKTSALESLDTALSPLVAKSLSDEERGDAL KRAELKMSTNRRALVDSALADLTESV LSQNANSYYWLGKCYE+KKLR EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_022951869.1 uncharacterized protein LOC111454602 [Cucurbita moschata]

8.5e-92

92.89

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST
        QGFKTSALESLDTALSPL AKSLS+EERGDAL KRAELKMSTNRR +VDSALADLTESV LSQNAN+Y WLGKCYE+KKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_023537835.1 uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]

2.9e-92

93.36

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST
        QGFKTSALESLDTALSPL AKSLS+EERGDAL KRAELKMSTNRRA+VDSALADLTESV LSQNAN+Y WLGKCYE+KKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_038884950.1 uncharacterized protein LOC120075535 [Benincasa hispida]

1.9e-96

97.16

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQI LILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST
        QGFKTSALESLDTALSPLVAKSLSDEERGDAL KRAELKMSTNRRALVDSALADLTESV LSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPL8 TPR_REGION domain-containing protein

1.0e-95

96.68

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST
        QGFKTSALESLDTALSPLVAKSLSDEERGDAL KRAELKMSTNRRALVDSALADLTESV LSQNANSYYWLGKCYE KKLR EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A1S3BC86 uncharacterized protein LOC103488119

2.1e-96

96.68

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD+
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST
        QGFKTSALESLDTALSPLVAKSLSDEERGDAL KRAELKMSTNRRALVDSALADLTESV LSQNANSYYWLGKCYE+KKLR EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A5A7VBU3 TPR domain protein

2.1e-96

96.68

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD+
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST
        QGFKTSALESLDTALSPLVAKSLSDEERGDAL KRAELKMSTNRRALVDSALADLTESV LSQNANSYYWLGKCYE+KKLR EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A6J1GK03 uncharacterized protein LOC111454602

4.1e-92

92.89

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST
        QGFKTSALESLDTALSPL AKSLS+EERGDAL KRAELKMSTNRR +VDSALADLTESV LSQNAN+Y WLGKCYE+KKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A6J1KRQ5 uncharacterized protein LOC111496615

5.3e-92

92.42

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST
        QGFKTSALESLDTALSPL AKSLS+EERGDAL KRAELKMSTNRRA+VDSA+ADLTESV LSQNAN+Y WLGKCYE+KKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLST

Query:  AREALERLSSS
        AREALERLS+S
Subjt:  AREALERLSSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

3.5e-35

44.16

Show/hide

Query:  TDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQG
        T+ ++Q A++++ +VMF A+  + QR   K R + R+ ++++R  ++ ++LLARAR+ P +S + SLA+  + EA+  IA+ P DAA HI++ALALD+ G
Subjt:  TDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQG

Query:  FKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKL---SQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEP
          TSAL+S D AL+    KSLS  ER DAL+KRAE+K++ NRR  +DSA+ DL E+V+L   +  A  +  LG+CYE K L+ +A+ A+ EAL  +P
Subjt:  FKTSALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKL---SQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGACCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCCTCGCTATGCATAACATTCCACAGAGATACTTTGCCAAGCTCCGATTG
CGCTTTCGATCTGACGTGGAATCCAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACGTCGTTAGCG
GAAGAAGTCGTAGCGGAAGCCAATAAGGCCATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAAGCTCTGGCTCTCGACATTCAAGGATTTAAAACC
TCTGCTCTGGAATCTCTCGATACGGCTCTGTCGCCGCTCGTCGCTAAGTCGCTCAGCGATGAGGAGCGAGGCGACGCGTTGCTCAAGCGAGCTGAGTTGAAGATG
TCCACGAACCGGCGAGCCCTAGTTGACTCGGCTTTGGCCGACTTGACCGAGTCCGTGAAACTGAGTCAGAATGCAAATTCCTACTATTGGTTGGGGAAATGCTAC
GAGATCAAGAAACTGAGAGGAGAGGCCAAGAAAGCATATGAAGAAGCTTTGAATATCGAACCACGATTATCCACCGCTCGGGAGGCATTGGAACGTCTATCATCA
TCGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKT
SALESLDTALSPLVAKSLSDEERGDALLKRAELKMSTNRRALVDSALADLTESVKLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSTAREALERLSS
S

ClCG08G011630 (gene) of Watermelon (Charleston Gray) v2.5 genome