| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0065060.1 RNA polymerase sigma factor sigC [Cucumis melo var. makuwa] | 2.0e-252 | 90.54 | Show/hide |
Query: SKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHYGIKNTWPSKVEDNFSSCTSLPSGKASPFGMLM
+KGREAAFNSG+LSFFS+ICEEGESI RETLKTYTCLSEAPQTS DLLN+EEIEMNSG+KS + LHYGIK+T PSKVEDNFSS TS+P+GKASPFG+LM
Subjt: SKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHYGIKNTWPSKVEDNFSSCTSLPSGKASPFGMLM
Query: ENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKTNDWHDDIIVYSGKRAGRRSVKKRATDNADKVA
ENLDVLEETF ESGML LERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLP+EDG DHN NQKTND + D+ VYSGKRAGRRSVKKRA DNADKVA
Subjt: ENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKTNDWHDDIIVYSGKRAGRRSVKKRATDNADKVA
Query: SRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQDELLRST
SRPLATRA KEKIH STIFSRKK+SNS KRRL+VAR+EAEMSTG KVVANLERIRETLEKESG+IASMSCWA+AA VDIKDLQKQLQFGWFC+DELLRST
Subjt: SRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQDELLRST
Query: NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNNGGRRYSDDDIA
NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARK+LN GGRRYSDDDIA
Subjt: NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNNGGRRYSDDDIA
Query: KATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEIGKLLH
+ATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTAD SIQSPEETVKR+LMK+DIFN+L+GLESRERQVLVLRYGLMDFQPKSLEEIGKLLH
Subjt: KATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEIGKLLH
|
|
| KAG6598762.1 RNA polymerase sigma factor sigC, partial [Cucurbita argyrosperma subsp. sororia] | 1.1e-261 | 82.73 | Show/hide |
Query: MGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVE--EIEMNSGSKSFTPLH
MGTSFRPNLKW FQIQTHSR+ SPSKLSPYASKGREA+FNSG+LSFFS+ CEEGE+ISRE LKTYTCLSEAPQT + LL++E EIE+NSG+KS L
Subjt: MGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVE--EIEMNSGSKSFTPLH
Query: YGIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLK-TSSFHDLSDLPIEDGGDHNGNQ
YG KN+ PSKVEDNF SCTSLP+G+ASPFGMLMENLDVLEETFTESGML LERDI+LQLTKLGALEFFN CLSRTLK +SSFHDLSDLPIE GGDHN NQ
Subjt: YGIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLK-TSSFHDLSDLPIEDGGDHNGNQ
Query: KTNDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIA
KT+D +D+I+VYSGKRAGRRSVK+RA DNADKVASRPLATRAAKEK RKKASNS+KRR IVAR+EAEMSTG KVVANLERIRETLEKESG+ A
Subjt: KTNDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIA
Query: SMSCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRG
SMSCWADAA +DIKDLQKQLQFGWFCQDELLRSTNSLV+FLAKKYRCSGLPMEDLVQAGA+GVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVAR+SRG
Subjt: SMSCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRG
Query: IQIPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEG
IQIPWSLTKAINQIQKARK LNN GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQK+GDGLNMKYME TAD SI+SPE+TVKR+LMK+DIFN+LE
Subjt: IQIPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEG
Query: LESRERQVLVLRYGLMDFQPKSLEEIGKLLHPLFGLIYFFQAWEPPVFSKLAAGQRSQDVHIALSGHTNEVGYNEHISI
LESRERQVLVLRYGLMD QPKSLEEIGKLL PPVFSKLAA QRSQ++ IALSGHT +V IS+
Subjt: LESRERQVLVLRYGLMDFQPKSLEEIGKLLHPLFGLIYFFQAWEPPVFSKLAAGQRSQDVHIALSGHTNEVGYNEHISI
|
|
| XP_004148429.2 RNA polymerase sigma factor sigC isoform X1 [Cucumis sativus] | 5.3e-261 | 88.09 | Show/hide |
Query: MMGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHY
MMGTSFRPNL+WGFQIQTHS K SPSKLSP+ASKGREAAFNSG+LSFFS+ICEEGESI RETLKTYTCLSEAPQTS+ DLLN+EEIEMNSG+KS P+HY
Subjt: MMGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHY
Query: GIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKT
GIK+T PSKVEDNFSSCTSLP+GKASPFG+LMENLDVLEETFTESGML LERDIVLQLTKLGALEFFNTCLSRTLKTSSFHD S LPIE G DHN NQKT
Subjt: GIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKT
Query: NDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASM
ND +D++ VYS K+AGRRSVKKRA DNADK+ASR L TRA KEKIH ST+FSRKK+SNS KRRLIVA +EAEMSTG KVVANLERIRETLEKESG+IASM
Subjt: NDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASM
Query: SCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQ
SCWA+AA VDIKDLQKQLQFG FC+DELLRSTNSLV+FLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFR STYIQYWIRKSMSRVVARNSRGIQ
Subjt: SCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQ
Query: IPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLE
IP SLTKAINQIQKARK+LN+ GRRYSDDDIA+ATGLPLAKVRVASNCLKVVGS DQKMGDG+NMKYMEFTADMSIQSPEETVKRKLMK+DIFN+L+ LE
Subjt: IPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLE
Query: SRERQVLVLRYGLMDFQPKSLEEIGKLLH
SRERQVLVLRYGL+DF+PKSLEEIGKLLH
Subjt: SRERQVLVLRYGLMDFQPKSLEEIGKLLH
|
|
| XP_008444981.1 PREDICTED: RNA polymerase sigma factor sigC [Cucumis melo] | 4.4e-271 | 90.93 | Show/hide |
Query: MMGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHY
MMGT FRPNLKWGFQIQTHS K SPSKLSPYASKGREAAFNSG+LSFFS+ICEEGESI RETLKTYTCLSEAPQTS DLLN+EEIEMNSG+KS + LHY
Subjt: MMGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHY
Query: GIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKT
GIK+T PSKVEDNFSS TS+P+GKASPFG+LMENLDVLEETF ESGML LERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLP+EDG DHN NQKT
Subjt: GIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKT
Query: NDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASM
ND + D+ VYSGKRAGRRSVKKRA DNADKVASRPLATRA KEKIH STIFSRKK+SNS KRRL+VAR+EAEMSTG KVVANLERIRETLEKESG+IASM
Subjt: NDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASM
Query: SCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQ
SCWA+AA VDIKDLQKQLQFGWFC+DELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQ
Subjt: SCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQ
Query: IPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLE
IPWSLTKAINQIQKARK+LN GGRRYSDDDIA+ATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTAD SIQSPEETVKRKLMK+DIFN+L+GLE
Subjt: IPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLE
Query: SRERQVLVLRYGLMDFQPKSLEEIGKLLH
SRERQVLVLRYGLMDFQPKSLEEIGKLLH
Subjt: SRERQVLVLRYGLMDFQPKSLEEIGKLLH
|
|
| XP_038884658.1 RNA polymerase sigma factor sigC isoform X1 [Benincasa hispida] | 2.3e-272 | 91.18 | Show/hide |
Query: MMGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHY
MMGTSFRPNLKWGFQIQTHSRKTSPSKL PYASKGREAAFNSG+LSFFS+I EEGESISRETLKTYTCLSEAPQTS+ DLLN+EEIEMN G+KS +PLHY
Subjt: MMGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHY
Query: GIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPI----EDGGDHNG
GIKNT PSKVEDNFSSCTS PSGKASPFGMLMENLDVLEETFTESGML LERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPI ED GDHN
Subjt: GIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPI----EDGGDHNG
Query: NQKTNDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGK
NQKT D +DDIIVYSGKRA RRSVKKRA D+ADKV S+PLATRAAKEKIH S I SRKKASNSRKRRLI+AR+EAEMSTG KVVANLERIRETLEKESG+
Subjt: NQKTNDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGK
Query: IASMSCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNS
+ SMSCWA+AAGVDIKDL+KQLQFGWFCQDELLRSTNSL+LFLA+KYRCSGLPMEDLVQAG+LGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARN+
Subjt: IASMSCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNS
Query: RGIQIPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVL
RGIQIPWSLTKAINQIQKARK+LNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVK+KLMK+DIFNVL
Subjt: RGIQIPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVL
Query: EGLESRERQVLVLRYGLMDFQPKSLEEIGKLLH
EGLESRERQVLVLRYGL+DFQPKSLEEIGKLLH
Subjt: EGLESRERQVLVLRYGLMDFQPKSLEEIGKLLH
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LLW1 Uncharacterized protein | 2.6e-261 | 88.09 | Show/hide |
Query: MMGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHY
MMGTSFRPNL+WGFQIQTHS K SPSKLSP+ASKGREAAFNSG+LSFFS+ICEEGESI RETLKTYTCLSEAPQTS+ DLLN+EEIEMNSG+KS P+HY
Subjt: MMGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHY
Query: GIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKT
GIK+T PSKVEDNFSSCTSLP+GKASPFG+LMENLDVLEETFTESGML LERDIVLQLTKLGALEFFNTCLSRTLKTSSFHD S LPIE G DHN NQKT
Subjt: GIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKT
Query: NDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASM
ND +D++ VYS K+AGRRSVKKRA DNADK+ASR L TRA KEKIH ST+FSRKK+SNS KRRLIVA +EAEMSTG KVVANLERIRETLEKESG+IASM
Subjt: NDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASM
Query: SCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQ
SCWA+AA VDIKDLQKQLQFG FC+DELLRSTNSLV+FLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFR STYIQYWIRKSMSRVVARNSRGIQ
Subjt: SCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQ
Query: IPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLE
IP SLTKAINQIQKARK+LN+ GRRYSDDDIA+ATGLPLAKVRVASNCLKVVGS DQKMGDG+NMKYMEFTADMSIQSPEETVKRKLMK+DIFN+L+ LE
Subjt: IPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLE
Query: SRERQVLVLRYGLMDFQPKSLEEIGKLLH
SRERQVLVLRYGL+DF+PKSLEEIGKLLH
Subjt: SRERQVLVLRYGLMDFQPKSLEEIGKLLH
|
|
| A0A1S3BBM8 RNA polymerase sigma factor sigC | 2.1e-271 | 90.93 | Show/hide |
Query: MMGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHY
MMGT FRPNLKWGFQIQTHS K SPSKLSPYASKGREAAFNSG+LSFFS+ICEEGESI RETLKTYTCLSEAPQTS DLLN+EEIEMNSG+KS + LHY
Subjt: MMGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHY
Query: GIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKT
GIK+T PSKVEDNFSS TS+P+GKASPFG+LMENLDVLEETF ESGML LERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLP+EDG DHN NQKT
Subjt: GIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKT
Query: NDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASM
ND + D+ VYSGKRAGRRSVKKRA DNADKVASRPLATRA KEKIH STIFSRKK+SNS KRRL+VAR+EAEMSTG KVVANLERIRETLEKESG+IASM
Subjt: NDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASM
Query: SCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQ
SCWA+AA VDIKDLQKQLQFGWFC+DELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQ
Subjt: SCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQ
Query: IPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLE
IPWSLTKAINQIQKARK+LN GGRRYSDDDIA+ATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTAD SIQSPEETVKRKLMK+DIFN+L+GLE
Subjt: IPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLE
Query: SRERQVLVLRYGLMDFQPKSLEEIGKLLH
SRERQVLVLRYGLMDFQPKSLEEIGKLLH
Subjt: SRERQVLVLRYGLMDFQPKSLEEIGKLLH
|
|
| A0A5A7VCX9 RNA polymerase sigma factor sigC | 9.9e-253 | 90.54 | Show/hide |
Query: SKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHYGIKNTWPSKVEDNFSSCTSLPSGKASPFGMLM
+KGREAAFNSG+LSFFS+ICEEGESI RETLKTYTCLSEAPQTS DLLN+EEIEMNSG+KS + LHYGIK+T PSKVEDNFSS TS+P+GKASPFG+LM
Subjt: SKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHYGIKNTWPSKVEDNFSSCTSLPSGKASPFGMLM
Query: ENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKTNDWHDDIIVYSGKRAGRRSVKKRATDNADKVA
ENLDVLEETF ESGML LERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLP+EDG DHN NQKTND + D+ VYSGKRAGRRSVKKRA DNADKVA
Subjt: ENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKTNDWHDDIIVYSGKRAGRRSVKKRATDNADKVA
Query: SRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQDELLRST
SRPLATRA KEKIH STIFSRKK+SNS KRRL+VAR+EAEMSTG KVVANLERIRETLEKESG+IASMSCWA+AA VDIKDLQKQLQFGWFC+DELLRST
Subjt: SRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQDELLRST
Query: NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNNGGRRYSDDDIA
NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARK+LN GGRRYSDDDIA
Subjt: NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNNGGRRYSDDDIA
Query: KATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEIGKLLH
+ATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTAD SIQSPEETVKR+LMK+DIFN+L+GLESRERQVLVLRYGLMDFQPKSLEEIGKLLH
Subjt: KATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEIGKLLH
|
|
| A0A6J1BRC1 RNA polymerase sigma factor sigC isoform X1 | 1.3e-252 | 85.28 | Show/hide |
Query: MGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHYG
MGTSFRPNLKW FQ+QTHSR SPSK P+ASKGREA+FNS +LSFFS ICEEGES SRETLKTYTCLSEAPQTS+ DLL+++EIE+NS ++ + HYG
Subjt: MGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHYG
Query: IKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLK--TSSFHDLSDLPIEDGGDHNGNQK
IKNT PSK+EDNFSSCTSLP+GKAS FGMLMENLDVLEE FTESGML LERDIVLQLTKLGALEFFNTCLSRTLK TSSF DLSDLPIEDGG HN NQK
Subjt: IKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLK--TSSFHDLSDLPIEDGGDHNGNQK
Query: TNDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIAS
T+ +DDIIVYSGK+ GRRS+K+RA D ADKVAS+P AT AAKEK H S F RK+ NSR+RRL+VAR+EAEMSTG KVVANLERIRETLEKES K AS
Subjt: TNDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIAS
Query: MSCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGI
MSCWADAAG+DIKDL KQLQFGWFCQ+ELLRSTNSLVLFLAKKYRC+GLPMEDLVQAGA+GVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGI
Subjt: MSCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGI
Query: QIPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGL
QIPWSLTKAINQIQKARK LNNG RRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTAD SIQSPEETVK+KLMK+DIFN+LEGL
Subjt: QIPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGL
Query: ESRERQVLVLRYGLMDFQPKSLEEIGKLLH
E RERQVL LRYGL DFQPKSLEEIGKLLH
Subjt: ESRERQVLVLRYGLMDFQPKSLEEIGKLLH
|
|
| A0A6J1KA34 RNA polymerase sigma factor sigC-like isoform X2 | 2.2e-252 | 85.98 | Show/hide |
Query: MGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHYG
MGTSFRPNLKW FQIQTHSR+ SPSKLSPYASKGREA+FNSG+LSFFS+ CEEGE+ISRE LKTYTCLSEAPQT + LL++EE E+NSG+KS + LHYG
Subjt: MGTSFRPNLKWGFQIQTHSRKTSPSKLSPYASKGREAAFNSGKLSFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHYG
Query: IKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLK-TSSFHDLSDLPIEDGGDHNGNQKT
KN+ PSKVEDNF SCTSLP+G+ASPF MLMENLDVLEETFTESGML LERDIVLQLTKLGALEFFN CLSRTLK +SSF DLSDLPIE GGDHN NQKT
Subjt: IKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTESGMLGLERDIVLQLTKLGALEFFNTCLSRTLK-TSSFHDLSDLPIEDGGDHNGNQKT
Query: NDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASM
+D + +IIVYSGKRAGRRSVK+RA DNADKVASRPLATRAAKEK SRKKASNS+KRR IVAR+EAEMSTG KVVANLERIRETLEKESG+ ASM
Subjt: NDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASM
Query: SCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQ
SCWADA+ +DIKDLQKQLQFGWFCQDELLRSTNSLV+FLAKKYRCSGLPMEDLVQAGA+GVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVAR+SRGIQ
Subjt: SCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQ
Query: IPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLE
IPWSLTKAINQIQKARK LNN GRRYSDDD+AKATGLPLAKVRVASNCLKVVGSVDQK+GDGLNMKYME TAD SI+SPE+TVKR+LMK+DIFN+LE LE
Subjt: IPWSLTKAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLE
Query: SRERQVLVLRYGLMDFQPKSLEEIGKLL
SRERQVLVLRYGLMD QPKSLEEIGKLL
Subjt: SRERQVLVLRYGLMDFQPKSLEEIGKLL
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O22056 RNA polymerase sigma factor sigB | 3.7e-47 | 34.22 | Show/hide |
Query: KVASRPLATR-AAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQDEL
K S P R A+E H + + ++S K L+ R E E+S G + + LER++ L + SG+ + + WA AAGVD K L++++ G C+D++
Subjt: KVASRPLATR-AAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQDEL
Query: LRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKML-NNGGRRYS
++S LV+ +AK Y+ +G+ ++DLVQ G G+++G E+FD +GF+FSTY +WI++++ + ++ SR I++P+ + +A ++++ARK L + G+
Subjt: LRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKML-NNGGRRYS
Query: DDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEIGKL
+++IA+ATGL + ++ K S+DQK+G N+K E AD + E+ + ++ M++D+ VL+ L +RE+QV+ R+G+ D + K+L+EIG++
Subjt: DDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEIGKL
Query: L
+
Subjt: L
|
|
| O24621 RNA polymerase sigma factor sigC | 6.2e-103 | 44.54 | Show/hide |
Query: SFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHYGIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTES
SF S++ EE ++LK C S +P T+ ++ + L +N E ++SS + L + +L +NL LEETF
Subjt: SFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHYGIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTES
Query: GMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKTNDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKI
+ +ERDI+LQ+ KLGA E F TCLSR +S LSD + D NQ+ + V S ++ +++ + T +S P+ R I
Subjt: GMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKTNDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKI
Query: HGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRC
+ ++ RK+R ++R+E EMSTG K+VA++ERIR LE+ESGK+AS+SCWA AAG++ K L + L +GW+C+DEL++ST SLVLFLA+ YR
Subjt: HGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRC
Query: SGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKML--NNGGRRYSDDDIAKATGLPLAKVR
G+ EDL+QAG +GVLQG ERFD RG++FSTY+QYWIRKSMS +V+R++RG+ IP S+ + IN IQKARK L ++G + +D++IAK TG + K+R
Subjt: SGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKML--NNGGRRYSDDDIAKATGLPLAKVR
Query: VASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEIGKLL
A+ CLKVVGS+D+K+GD K++EFT D +++SPEE V R+ + DI ++LEGLE RE+QV+VLRYGL D++PKSLEEIGKLL
Subjt: VASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEIGKLL
|
|
| P26683 RNA polymerase sigma factor SigA | 1.4e-38 | 31.8 | Show/hide |
Query: DNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQ
D+A + R +K H + R + RL+ A E E++ + LER+RE L ++ + S WA+A + + + +L G +
Subjt: DNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQ
Query: DELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNNG-GR
D++++S LV+ +AKKY GL +DL+Q G+LG+++ E+FD ++G++FSTY +WIR++++R +A SR I++P L + I++I+K K+L+ GR
Subjt: DELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNNG-GR
Query: RYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEI
+ ++++IA + + K+R + ++ S++ +G + + +F + ++PE+ V + L++ED+ VL+ L RER VL LRYGL D + K+LEEI
Subjt: RYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEI
Query: GKLLH
G++ +
Subjt: GKLLH
|
|
| P38023 RNA polymerase sigma factor SigA1 | 1.8e-38 | 32.69 | Show/hide |
Query: ATDNADKVASRPLATRAAKEKIHGSTIFS--RKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFG
A D+ D V A AK K+ + R + RL+ A E E++ + LERIR+ L ++ ++ S + WA A + + +++L G
Subjt: ATDNADKVASRPLATRAAKEKIHGSTIFS--RKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFG
Query: WFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNN
+D++++S LV+ +AKKY GL +DL+Q G+LG+++ E+FD ++G++FSTY +WIR++++R +A SR I++P L + I++I+K K+L+
Subjt: WFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNN
Query: G-GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKS
GR+ ++++IA + + K+R + ++ S++ +G + + +F + ++PE+ V + L++ED+ VL L RER VL LRYGL D + K+
Subjt: G-GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKS
Query: LEEIGKLLH
LEEIG+L +
Subjt: LEEIGKLLH
|
|
| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 4.2e-35 | 28.31 | Show/hide |
Query: IVYSGKRAGRRSVKKRA--TDNADKVASRPLATRAAKEKIHGSTIFSRKKAS--NSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCW
IV S ++ RR+ +RA +++ D P T A K+ G+ + ++L+ A+ EAE+ + + + LE+++ LE ++G ++ W
Subjt: IVYSGKRAGRRSVKKRA--TDNADKVASRPLATRAAKEKIHGSTIFSRKKAS--NSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCW
Query: ADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPW
A+A G+ L+ + G +++L+ + LV+ +AK+Y+ GL +DL+Q G++G+++ VE+F P+ G RF+TY +WIR+S+ + + +NSR I++P
Subjt: ADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPW
Query: SLTKAINQIQKARK-MLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESR
++ + ++ +ARK + G R S +++A G+ K+ + S+ Q + + + E T D I++P +V ++LM+ + N+L L +
Subjt: SLTKAINQIQKARK-MLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESR
Query: ERQVLVLRYGLMDFQPKSLEEIGKL
ER+++ LR+G+ + +SL EIG++
Subjt: ERQVLVLRYGLMDFQPKSLEEIGKL
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08540.1 RNApolymerase sigma subunit 2 | 2.6e-48 | 34.22 | Show/hide |
Query: KVASRPLATR-AAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQDEL
K S P R A+E H + + ++S K L+ R E E+S G + + LER++ L + SG+ + + WA AAGVD K L++++ G C+D++
Subjt: KVASRPLATR-AAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQDEL
Query: LRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKML-NNGGRRYS
++S LV+ +AK Y+ +G+ ++DLVQ G G+++G E+FD +GF+FSTY +WI++++ + ++ SR I++P+ + +A ++++ARK L + G+
Subjt: LRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKML-NNGGRRYS
Query: DDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEIGKL
+++IA+ATGL + ++ K S+DQK+G N+K E AD + E+ + ++ M++D+ VL+ L +RE+QV+ R+G+ D + K+L+EIG++
Subjt: DDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEIGKL
Query: L
+
Subjt: L
|
|
| AT1G64860.1 sigma factor A | 2.2e-23 | 26.99 | Show/hide |
Query: IIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADA
+I SG A +R + + N V + ++ ++ +++ G + + S + V R ++ +G ++ + R+++ L G S A +
Subjt: IIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKIHGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADA
Query: AGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLT
+ +LQ L +++L S LV+ +A++Y G M DLVQ G +G+L+G+E+FD +GFR STY+ +WIR+ +SR + NSR +++P L
Subjt: AGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLT
Query: KAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLN----MKYMEFTADMSIQ-SPEETVKRKLMKEDIFNVLEG-LE
+ + I+ A+ L G S D IA++ + KVR A+ + V S+D+ LN + + AD ++ +P +KE++ ++ L
Subjt: KAINQIQKARKMLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLN----MKYMEFTADMSIQ-SPEETVKRKLMKEDIFNVLEG-LE
Query: SRERQVLVLRYGLMDFQPKSLEEIGK
RE++++ L YGL D + + E+I K
Subjt: SRERQVLVLRYGLMDFQPKSLEEIGK
|
|
| AT2G36990.1 RNApolymerase sigma-subunit F | 3.0e-36 | 28.31 | Show/hide |
Query: IVYSGKRAGRRSVKKRA--TDNADKVASRPLATRAAKEKIHGSTIFSRKKAS--NSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCW
IV S ++ RR+ +RA +++ D P T A K+ G+ + ++L+ A+ EAE+ + + + LE+++ LE ++G ++ W
Subjt: IVYSGKRAGRRSVKKRA--TDNADKVASRPLATRAAKEKIHGSTIFSRKKAS--NSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCW
Query: ADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPW
A+A G+ L+ + G +++L+ + LV+ +AK+Y+ GL +DL+Q G++G+++ VE+F P+ G RF+TY +WIR+S+ + + +NSR I++P
Subjt: ADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPW
Query: SLTKAINQIQKARK-MLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESR
++ + ++ +ARK + G R S +++A G+ K+ + S+ Q + + + E T D I++P +V ++LM+ + N+L L +
Subjt: SLTKAINQIQKARK-MLNNGGRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESR
Query: ERQVLVLRYGLMDFQPKSLEEIGKL
ER+++ LR+G+ + +SL EIG++
Subjt: ERQVLVLRYGLMDFQPKSLEEIGKL
|
|
| AT3G53920.1 RNApolymerase sigma-subunit C | 4.4e-104 | 44.54 | Show/hide |
Query: SFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHYGIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTES
SF S++ EE ++LK C S +P T+ ++ + L +N E ++SS + L + +L +NL LEETF
Subjt: SFFSTICEEGESISRETLKTYTCLSEAPQTSSGDLLNVEEIEMNSGSKSFTPLHYGIKNTWPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTES
Query: GMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKTNDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKI
+ +ERDI+LQ+ KLGA E F TCLSR +S LSD + D NQ+ + V S ++ +++ + T +S P+ R I
Subjt: GMLGLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNGNQKTNDWHDDIIVYSGKRAGRRSVKKRATDNADKVASRPLATRAAKEKI
Query: HGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRC
+ ++ RK+R ++R+E EMSTG K+VA++ERIR LE+ESGK+AS+SCWA AAG++ K L + L +GW+C+DEL++ST SLVLFLA+ YR
Subjt: HGSTIFSRKKASNSRKRRLIVARHEAEMSTGAKVVANLERIRETLEKESGKIASMSCWADAAGVDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRC
Query: SGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKML--NNGGRRYSDDDIAKATGLPLAKVR
G+ EDL+QAG +GVLQG ERFD RG++FSTY+QYWIRKSMS +V+R++RG+ IP S+ + IN IQKARK L ++G + +D++IAK TG + K+R
Subjt: SGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKML--NNGGRRYSDDDIAKATGLPLAKVR
Query: VASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEIGKLL
A+ CLKVVGS+D+K+GD K++EFT D +++SPEE V R+ + DI ++LEGLE RE+QV+VLRYGL D++PKSLEEIGKLL
Subjt: VASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEEIGKLL
|
|
| AT5G13730.1 sigma factor 4 | 1.2e-29 | 35.61 | Show/hide |
Query: QDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNNGGR
++++ R LV+ +A Y+ GL ++DL+Q G++G+L+G ERFDP RG++ STY+ +WI++++ R +A SR +++P S+ + ++ +A +L R
Subjt: QDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNNGGR
Query: RY-SDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEE
R S ++IA+ L ++ VR+A + S+D+ M E PEE VKR+ MK +I +L L +RE +VL L +GL P S EE
Subjt: RY-SDDDIAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRKLMKEDIFNVLEGLESRERQVLVLRYGLMDFQPKSLEE
Query: IGKLL
IGK L
Subjt: IGKLL
|
|
