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ClCG08G012500 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G012500
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionIsocitrate dehydrogenase (NADP(+))
Genome locationCG_Chr08:25417338..25421537
RNA-Seq ExpressionClCG08G012500
SyntenyClCG08G012500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598797.1 hypothetical protein SDJN03_08575, partial [Cucurbita argyrosperma subsp. sororia]8.9e-1963.64Show/hide
Query:  CFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVL--LLIFVPLVFYSVPSGID
        C SI  ++VDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNR+YRRCP+CRA+  ++     +F  + F +   G+D
Subjt:  CFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVL--LLIFVPLVFYSVPSGID
KAG7029735.1 hypothetical protein SDJN02_08077 [Cucurbita argyrosperma subsp. argyrosperma]6.8e-1976.67Show/hide
Query:  CFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVLLL
        C SI  ++VDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNR+YRRCP+CRA+S  ++ +
Subjt:  CFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVLLL
XP_022962550.1 uncharacterized protein LOC111462947 [Cucurbita moschata]8.9e-1963.64Show/hide
Query:  CFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVL--LLIFVPLVFYSVPSGID
        C SI  ++VDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNR+YRRCP+CRA+  ++     +F  + F +   G+D
Subjt:  CFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVL--LLIFVPLVFYSVPSGID
XP_022996808.1 uncharacterized protein LOC111491935 [Cucurbita maxima]8.9e-1956.04Show/hide
Query:  TVASSNYAFASISYCFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVL--LLIFVPLVFYSVPSGID
        +++SS+ +  + + C SI  ++VDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNR+YRRCP+CRA+  ++     +F  + F +   G+D
Subjt:  TVASSNYAFASISYCFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVL--LLIFVPLVFYSVPSGID
XP_038885868.1 uncharacterized protein LOC120076171 [Benincasa hispida]4.0e-1975Show/hide
Query:  STVASSNYAFASISYCFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRAL
        S  +SS  +F S+  C SI  ++VDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCP+CRA+
Subjt:  STVASSNYAFASISYCFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRAL
TrEMBL top hitse value%identityAlignment
A0A1S3BCN0 uncharacterized protein LOC103488212 isoform X13.6e-1868.57Show/hide
Query:  FASTVASSNYAFASISYCFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRAL
        F+   +SS+ +  S + C  I  ++VDSTI CEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCP+CRA+
Subjt:  FASTVASSNYAFASISYCFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRAL
A0A5A7VGJ7 Uncharacterized protein2.8e-1867.12Show/hide
Query:  FASTVASSNYAFASISYCFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSL
        F+   +SS+ +  S + C  I  ++VDSTI CEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCP+CRA S +
Subjt:  FASTVASSNYAFASISYCFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSL
A0A6J1BQ99 uncharacterized protein LOC111004819 isoform X13.6e-1867.16Show/hide
Query:  STVASSNYAFASISYCFSISLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRAL
        S+ + S++  A  S    + L+ DSTIACEPCNG+GWIVCDFC+GQKTNVKAENNRIYRRCP+CRA+
Subjt:  STVASSNYAFASISYCFSISLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRAL
A0A6J1HFF6 uncharacterized protein LOC1114629474.3e-1963.64Show/hide
Query:  CFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVL--LLIFVPLVFYSVPSGID
        C SI  ++VDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNR+YRRCP+CRA+  ++     +F  + F +   G+D
Subjt:  CFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVL--LLIFVPLVFYSVPSGID
A0A6J1K9Q6 uncharacterized protein LOC1114919354.3e-1956.04Show/hide
Query:  TVASSNYAFASISYCFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVL--LLIFVPLVFYSVPSGID
        +++SS+ +  + + C SI  ++VDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNR+YRRCP+CRA+  ++     +F  + F +   G+D
Subjt:  TVASSNYAFASISYCFSI-SLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVL--LLIFVPLVFYSVPSGID
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24395.1 chaperone protein dnaJ-related6.8e-1772.73Show/hide
Query:  DSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRAL
        ++ I CE CNGKGW++CDFC+GQKTNVK+ENNRIYRRCP C+A+
Subjt:  DSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRAL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATGTTACAATATCTACTTGAATCCTATTTGCAAGACATAGCTTTTGCTTGGGTTGTGAAGAGGAGGGAGAATAGAACCTTCAAGATGGAGGCTGTTTGGAGAGC
ACTCTCTTTCAAAACTTATTTAGTAACTCTGACCAAAAAAGAGTGGAGTGACCGTGACGATGAAGGAGAAGCATTCTGTTCTGTTGTTCGTTGTTTAGCTCCGTCCTCGC
TCCAATGGCGACGATCGTTACGGCTCTTACGAAGATCAACATCGTCCGAATTTCTCCATCTCGATCCACTTCCGCCAGATCGTCCTTCAGTTCTGCGCGTTGCTCATCAA
TCCAGCAGGTCCAGGTACAAGTACAGACAGCATAGTCTCAATGATAACTCCTGTTTCGCTTCAACTGTAGCTTCTTCAAACTACGCATTTGCTTCTATTTCTTACTGTTT
TTCGATTTCCTTGAAGGTTGATTCAACAATTGCTTGCGAACCTTGTAATGGTAAAGGATGGATAGTGTGTGATTTCTGTGAAGGGCAGAAGACTAATGTGAAGGCCGAGA
ACAATCGTATCTATCGACGTTGTCCGGCTTGCCGAGCTCTTTCAAGTTTGGTGTTGTTACTGATATTTGTGCCACTAGTATTCTATTCAGTCCCTTCAGGAATTGATCAA
TTGTCGGATATGTTCTATGTTCAAAGTGCAAGGTTTTCAAATGTGTTACTTTCCCAAACTTCAGTGACGGTGCAGAACTATCCTTTTGAACCTCTAATATCTCTTGAATA
A
mRNA sequenceShow/hide mRNA sequence
ATGAGGATGTTACAATATCTACTTGAATCCTATTTGCAAGACATAGCTTTTGCTTGGGTTGTGAAGAGGAGGGAGAATAGAACCTTCAAGATGGAGGCTGTTTGGAGAGC
ACTCTCTTTCAAAACTTATTTAGTAACTCTGACCAAAAAAGAGTGGAGTGACCGTGACGATGAAGGAGAAGCATTCTGTTCTGTTGTTCGTTGTTTAGCTCCGTCCTCGC
TCCAATGGCGACGATCGTTACGGCTCTTACGAAGATCAACATCGTCCGAATTTCTCCATCTCGATCCACTTCCGCCAGATCGTCCTTCAGTTCTGCGCGTTGCTCATCAA
TCCAGCAGGTCCAGGTACAAGTACAGACAGCATAGTCTCAATGATAACTCCTGTTTCGCTTCAACTGTAGCTTCTTCAAACTACGCATTTGCTTCTATTTCTTACTGTTT
TTCGATTTCCTTGAAGGTTGATTCAACAATTGCTTGCGAACCTTGTAATGGTAAAGGATGGATAGTGTGTGATTTCTGTGAAGGGCAGAAGACTAATGTGAAGGCCGAGA
ACAATCGTATCTATCGACGTTGTCCGGCTTGCCGAGCTCTTTCAAGTTTGGTGTTGTTACTGATATTTGTGCCACTAGTATTCTATTCAGTCCCTTCAGGAATTGATCAA
TTGTCGGATATGTTCTATGTTCAAAGTGCAAGGTTTTCAAATGTGTTACTTTCCCAAACTTCAGTGACGGTGCAGAACTATCCTTTTGAACCTCTAATATCTCTTGAATA
A
Protein sequenceShow/hide protein sequence
MRMLQYLLESYLQDIAFAWVVKRRENRTFKMEAVWRALSFKTYLVTLTKKEWSDRDDEGEAFCSVVRCLAPSSLQWRRSLRLLRRSTSSEFLHLDPLPPDRPSVLRVAHQ
SSRSRYKYRQHSLNDNSCFASTVASSNYAFASISYCFSISLKVDSTIACEPCNGKGWIVCDFCEGQKTNVKAENNRIYRRCPACRALSSLVLLLIFVPLVFYSVPSGIDQ
LSDMFYVQSARFSNVLLSQTSVTVQNYPFEPLISLE