; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG08G013170 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G013170
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationCG_Chr08:26063486..26065707
RNA-Seq ExpressionClCG08G013170
SyntenyClCG08G013170
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064949.1 putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa]6.7e-7991.03Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT
        MSRPGDWNCRSCNHLNFQRRDSC RCG+PRADFGGGSYGGGRV GSSSFGFTTGPDVRPGDWYCTVANCGAHNF+SRSICFKCGA+KDE SAAAYDGDL 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT

Query:  RMRGFNFGGASNRPGWKSDRIAMSITLPAEGNALDAMRQGIPTAGRHTRKGGANGR
        RMRGFNFGGASNRPGWKSDRIAMS TL  EGNALDAMRQGIPTA  HT KGGANG+
Subjt:  RMRGFNFGGASNRPGWKSDRIAMSITLPAEGNALDAMRQGIPTAGRHTRKGGANGR

KAG6585459.1 Peptidyl-prolyl cis-trans isomerase CYP95, partial [Cucurbita argyrosperma subsp. sororia]3.1e-6076.58Show/hide
Query:  NHHHRLFHQRNV-NQAIETEPPSLQLHAQGLNLQGKKKNRMSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPG
        N  H +  +RNV  QAI+T   S              + RMSRPGDWNCRSCNHLNFQRRDSCHRCG+PRADFGG  YGGGR  GSSSFGFTTGPDVRPG
Subjt:  NHHHRLFHQRNV-NQAIETEPPSLQLHAQGLNLQGKKKNRMSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPG

Query:  DWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLTRMRGFNFGGASNRPGWKS
        DWYC VANCGAHNFASRSICFKCGASKDEASAAAYDGDL+R+RGFNFGGASNRPGWKS
Subjt:  DWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLTRMRGFNFGGASNRPGWKS

XP_004138734.1 uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus]1.3e-6194.92Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT
        MSRPGDWNCRSCNHLNFQRRDSC RCG+PRADFGGGSYGGGRV GSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGA+KDE SAAAYDGDL 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT

Query:  RMRGFNFGGASNRPGWKS
        RMRGFNFGGASNRPGWKS
Subjt:  RMRGFNFGGASNRPGWKS

XP_023002539.1 uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita maxima]4.1e-6094.07Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT
        MSRPGDWNCRSCNHLNFQRRDSCHRCG+PRADFGGG YGGGR  GSSSFGFTTGPDVRPGDWYC VANCGAHNFASRSICFKCGASKDEASAAAYDGDL+
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT

Query:  RMRGFNFGGASNRPGWKS
        R+RGFNFGGASNRPGWKS
Subjt:  RMRGFNFGGASNRPGWKS

XP_038884423.1 uncharacterized RNA-binding protein C17H9.04c-like [Benincasa hispida]9.7e-6295.76Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT
        MSRPGDWNCRSCNHLNFQRRDSC RCGEPRADF GGSYG GRV+GSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDE SAAAYDGDLT
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT

Query:  RMRGFNFGGASNRPGWKS
        RMRGFNFGGASNRPGWKS
Subjt:  RMRGFNFGGASNRPGWKS

TrEMBL top hitse value%identityAlignment
A0A0A0LLW7 Uncharacterized protein2.2e-7581.18Show/hide
Query:  KRKPKPKPLHRYKNHHHRLFHQRNVNQAIETEPPSLQLHAQGLNLQGKKKNRMSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSS
        K K K + LHRYKNHHHRL HQRNV + ++T+PPS          + K  NRMSRPGDWNCRSCNHLNFQRRDSC RCG+PRADFGGGSYGGGRV GSSS
Subjt:  KRKPKPKPLHRYKNHHHRLFHQRNVNQAIETEPPSLQLHAQGLNLQGKKKNRMSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSS

Query:  FGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLTRMRGFNFGGASNRPGWKS
        FGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGA+KDE SAAAYDGDL RMRGFNFGGASNRPGWKS
Subjt:  FGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLTRMRGFNFGGASNRPGWKS

A0A1S3BBL4 uncharacterized RNA-binding protein C17H9.04c6.2e-6294.92Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT
        MSRPGDWNCRSCNHLNFQRRDSC RCG+PRADFGGGSYGGGRV GSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGA+KDE SAAAYDGDL 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT

Query:  RMRGFNFGGASNRPGWKS
        RMRGFNFGGASNRPGWKS
Subjt:  RMRGFNFGGASNRPGWKS

A0A5A7VHK5 Putative RNA-binding protein C17H9.04c3.2e-7991.03Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT
        MSRPGDWNCRSCNHLNFQRRDSC RCG+PRADFGGGSYGGGRV GSSSFGFTTGPDVRPGDWYCTVANCGAHNF+SRSICFKCGA+KDE SAAAYDGDL 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT

Query:  RMRGFNFGGASNRPGWKSDRIAMSITLPAEGNALDAMRQGIPTAGRHTRKGGANGR
        RMRGFNFGGASNRPGWKSDRIAMS TL  EGNALDAMRQGIPTA  HT KGGANG+
Subjt:  RMRGFNFGGASNRPGWKSDRIAMSITLPAEGNALDAMRQGIPTAGRHTRKGGANGR

A0A6J1BUS6 uncharacterized RNA-binding protein C17H9.04c-like2.2e-5989.83Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT
        MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGG YGG   VGSSSFGFTTGPDVRPGDWYC + NCGAHNFASRSICFKCGA KD+ASA AYDGD+ 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT

Query:  RMRGFNFGGASNRPGWKS
        RMRGFNFGGASNRPGWKS
Subjt:  RMRGFNFGGASNRPGWKS

A0A6J1KQR0 uncharacterized RNA-binding protein C17H9.04c-like2.0e-6094.07Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT
        MSRPGDWNCRSCNHLNFQRRDSCHRCG+PRADFGGG YGGGR  GSSSFGFTTGPDVRPGDWYC VANCGAHNFASRSICFKCGASKDEASAAAYDGDL+
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLT

Query:  RMRGFNFGGASNRPGWKS
        R+RGFNFGGASNRPGWKS
Subjt:  RMRGFNFGGASNRPGWKS

SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c9.0e-1036.11Show/hide
Query:  KNRMSRPGDWNCRSCNHLNFQRRDSCHRCGEP--------------RADFG-GGSYG----------GGRVVGS----------------------SSFG
        KNR  RPGDWNC  C   NFQRR SC RC  P                DF  G SYG          GG V  S                      SS  
Subjt:  KNRMSRPGDWNCRSCNHLNFQRRDSCHRCGEP--------------RADFG-GGSYG----------GGRVVGS----------------------SSFG

Query:  FTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAA
        F      R GDW C    CG HNFA    C +CGAS+  A+  A
Subjt:  FTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAA

O95218 Zinc finger Ran-binding domain-containing protein 27.4e-0433.7Show/hide
Query:  KNRMSRPGDWNC--RSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASK
        KN     GDW C  + C ++NF RR SC+RCG  +         GG  +G +    + G      DW C    C   N+A RS C  C   K
Subjt:  KNRMSRPGDWNC--RSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASK

Q27294 RNA-binding protein cabeza2.3e-0532Show/hide
Query:  NRMSRPGDWNCRSCNHLNFQRRDSCHRCGEPRAD---FGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAY
        N   R GDW C SCN+ NF  R+ C+RC  P+ D     GG  GGG   G    G+  G D   G         G HN        + G S+        
Subjt:  NRMSRPGDWNCRSCNHLNFQRRDSCHRCGEPRAD---FGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAY

Query:  DGDLTRMRGFNFGGASNRPGWKSDR
         G  +R    N GG   R G   +R
Subjt:  DGDLTRMRGFNFGGASNRPGWKSDR

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 21.5e-0434.78Show/hide
Query:  KNRMSRPGDWNC--RSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASK
        KN     GDW C  + C ++NF RR SC+RCG  +         GG  +G +    + G      DW C    CG  N+A RS C  C   K
Subjt:  KNRMSRPGDWNC--RSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASK

Q9R020 Zinc finger Ran-binding domain-containing protein 27.4e-0433.7Show/hide
Query:  KNRMSRPGDWNC--RSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASK
        KN     GDW C  + C ++NF RR SC+RCG  +         GG  +G +    + G      DW C    C   N+A RS C  C   K
Subjt:  KNRMSRPGDWNC--RSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASK

Arabidopsis top hitse value%identityAlignment
AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein8.1e-0628.72Show/hide
Query:  RPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYD
        + GDW C++CN LNF +   C RC +                        T   + PG+W C   +C   NF   SIC KC   + +A+    D
Subjt:  RPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYD

AT2G17975.1 zinc finger (Ran-binding) family protein3.9e-0834.78Show/hide
Query:  RPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAA
        R GDW C  C + N+  R  C+RC +PR      +    + +             R GDW CT   C  +N+ASR  C KCG SK+ A+ +A
Subjt:  RPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAA

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein2.4e-1840.35Show/hide
Query:  GDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLTRMRG
        GDW C +C H NF++R+SC +CG P+  FGG        V  S++ +    +V  GDWYC   NCG+HN+ASR+ C++CG  K E +   Y     +M  
Subjt:  GDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLTRMRG

Query:  FNFGGASNRPGWKS
        +   GA+  PGWK+
Subjt:  FNFGGASNRPGWKS

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein6.8e-3758.96Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGG------GSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASA--
        MSRPGDWNCRSC+HLNFQRRDSC RCG+ R+  GG      G++GG  +   S+FGFTTG DVRPGDWYCTV NCG HNFASRS CFKCG  KDE  A  
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGG------GSYGGGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASA--

Query:  --------AAYDGDLTRMRGFNFGGASNRPGWKS
                A +D D+ R R    GG   R  WKS
Subjt:  --------AAYDGDLTRMRGFNFGGASNRPGWKS

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein6.3e-3559.85Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYG-----GGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDE---ASA
        M+RPGDWNCR C+HLNFQRRDSC RC EPR   GG S       GGR V SSSFGF TGPDVRPGDWYC + +CG HNFA+RS CFKCGA+KDE   +SA
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYG-----GGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDE---ASA

Query:  AAYDGDLTRMRG-----FNFGGASN------RPGWKS
        AA  G +    G     F FGG+S+      R  WKS
Subjt:  AAYDGDLTRMRG-----FNFGGASN------RPGWKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAACCTAAAACGGCCACTGAGTCACAGAGTAATTGGTAAGCGAAAGCCAAAGCCAAAACCTCTTCACCGGTATAAAAACCACCACCACCGGCTGTTTCAC
CAGAGAAACGTGAATCAAGCCATTGAAACCGAACCGCCATCACTTCAACTTCACGCACAAGGACTAAATTTGCAGGGAAAAAAAAAAAACAGGATGAGTAGGCCG
GGGGATTGGAATTGCAGGTCTTGCAACCATCTCAACTTTCAACGAAGGGATTCGTGTCACCGATGTGGAGAGCCTAGGGCCGATTTCGGCGGCGGAAGCTACGGC
GGCGGAAGAGTTGTTGGTTCTTCGTCCTTCGGTTTCACCACCGGCCCCGACGTCCGCCCTGGGGATTGGTACTGCACCGTCGCCAACTGCGGCGCTCATAACTTC
GCTAGCCGCTCTATCTGCTTCAAGTGCGGCGCCTCCAAGGATGAGGCTTCCGCCGCCGCCTACGACGGCGATTTGACCAGAATGAGAGGCTTTAACTTCGGCGGT
GCCTCCAACCGCCCTGGATGGAAATCTGATCGGATTGCAATGAGCATAACTTTGCCAGCCGAAGGGAATGCTTTAGATGCAATGCGCCAAGGGATTCCAACAGCA
GGTCGCCATACTCGTAAAGGTGGTGCCAATGGAAGGAATAAATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAACCTAAAACGGCCACTGAGTCACAGAGTAATTGGTAAGCGAAAGCCAAAGCCAAAACCTCTTCACCGGTATAAAAACCACCACCACCGGCTGTTTCAC
CAGAGAAACGTGAATCAAGCCATTGAAACCGAACCGCCATCACTTCAACTTCACGCACAAGGACTAAATTTGCAGGGAAAAAAAAAAAACAGGATGAGTAGGCCG
GGGGATTGGAATTGCAGGTCTTGCAACCATCTCAACTTTCAACGAAGGGATTCGTGTCACCGATGTGGAGAGCCTAGGGCCGATTTCGGCGGCGGAAGCTACGGC
GGCGGAAGAGTTGTTGGTTCTTCGTCCTTCGGTTTCACCACCGGCCCCGACGTCCGCCCTGGGGATTGGTACTGCACCGTCGCCAACTGCGGCGCTCATAACTTC
GCTAGCCGCTCTATCTGCTTCAAGTGCGGCGCCTCCAAGGATGAGGCTTCCGCCGCCGCCTACGACGGCGATTTGACCAGAATGAGAGGCTTTAACTTCGGCGGT
GCCTCCAACCGCCCTGGATGGAAATCTGATCGGATTGCAATGAGCATAACTTTGCCAGCCGAAGGGAATGCTTTAGATGCAATGCGCCAAGGGATTCCAACAGCA
GGTCGCCATACTCGTAAAGGTGGTGCCAATGGAAGGAATAAATTCTAGCTAGAAAGAAGAGGAGAGTTTCCCATGATATCTGGAACGTCGTTGTTTTTTTTTTCT
TTTTCCTGTACCCTCTCTATTTTTCGGTTTCAAAAGTGATTTAAGTGTCTCCTTTTTGACGGGGGAGCTTTTAATTTTAGAAGAAGTATGGAATTTCTGCATGCA
TGCAGAAAAATATACTTTGGCAATCGCATTTTAATGAGGCCCCCTCTTTTTGTATCCAATTTTCTAATTTATATTAG
Protein sequenceShow/hide protein sequence
MKNLKRPLSHRVIGKRKPKPKPLHRYKNHHHRLFHQRNVNQAIETEPPSLQLHAQGLNLQGKKKNRMSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGSYG
GGRVVGSSSFGFTTGPDVRPGDWYCTVANCGAHNFASRSICFKCGASKDEASAAAYDGDLTRMRGFNFGGASNRPGWKSDRIAMSITLPAEGNALDAMRQGIPTA
GRHTRKGGANGRNKF