; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG08G014040 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G014040
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPseudouridine synthase
Genome locationCG_Chr08:26893805..26897033
RNA-Seq ExpressionClCG08G014040
SyntenyClCG08G014040
Gene Ontology termsGO:0000455 - enzyme-directed rRNA pseudouridine synthesis (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR002942 - RNA-binding S4 domain
IPR006145 - Pseudouridine synthase, RsuA/RluA-like
IPR006224 - Pseudouridine synthase, RluC/RluD, conserved site
IPR006225 - Pseudouridine synthase, RluC/RluD
IPR020103 - Pseudouridine synthase, catalytic domain superfamily
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038886059.1 RNA pseudouridine synthase 2, chloroplastic isoform X1 [Benincasa hispida]4.2e-22785.89Show/hide
Query:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
        MISVCSARTIQASPSSIQLFFPRNRRRIT DVLRFS NLSTR SD DEYGEAQSER AN+AGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
Subjt:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA

Query:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
        GLVSVNGRIIDK                                 VSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
Subjt:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG

Query:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP
        NATGTLVNAILNHCSLPMVATS GE PSDMDISDDEFSS+EIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFK HSIERVYISLTCGVP
Subjt:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP

Query:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAAS---------------RYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGG
        PSTAGRIEVPICRDPNNRIRM AVSGTNNNPHAKHAAS               RYKVMEILAQGGSSLVEWRLETGRTHQIRAHAK+MGIPLLGD+VYGG
Subjt:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAAS---------------RYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGG

Query:  TKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVSLILISFI
        TKSM MSLLR++TSSSCHSQLMQ +SSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKV+LIL SFI
Subjt:  TKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVSLILISFI

XP_038886060.1 RNA pseudouridine synthase 2, chloroplastic isoform X2 [Benincasa hispida]1.9e-22786.43Show/hide
Query:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
        MISVCSARTIQASPSSIQLFFPRNRRRIT DVLRFS NLSTR SD DEYGEAQSER AN+AGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
Subjt:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA

Query:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
        GLVSVNGRIIDK                                 VSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
Subjt:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG

Query:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP
        NATGTLVNAILNHCSLPMVATS GE PSDMDISDDEFSS+EIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFK HSIERVYISLTCGVP
Subjt:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP

Query:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAAS------------RYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKS
        PSTAGRIEVPICRDPNNRIRM AVSGTNNNPHAKHAAS            RYKVMEILAQGGSSLVEWRLETGRTHQIRAHAK+MGIPLLGD+VYGGTKS
Subjt:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAAS------------RYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKS

Query:  MVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVSLILISFI
        M MSLLR++TSSSCHSQLMQ +SSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKV+LIL SFI
Subjt:  MVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVSLILISFI

XP_038886061.1 RNA pseudouridine synthase 2, chloroplastic isoform X3 [Benincasa hispida]4.3e-22485.5Show/hide
Query:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
        MISVCSARTIQASPSSIQLFFPRNRRRIT DVLRFS NLSTR SD DEYGEAQSER AN+AGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
Subjt:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA

Query:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
        GLVSVNGRIIDK                                 VSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
Subjt:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG

Query:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP
        NATGTLVNAILNHCSLPMVATS GE PSDMDISDDEFSS+EIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFK HSIERVYISLTCGVP
Subjt:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP

Query:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAAS---------------RYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGG
        PSTAGRIEVPICRDPNNRIRM AVSGTNNNPHAKHAAS               RYKVMEILAQGGSSLVEWRLETGRTHQIRAHAK+MGIPLLGD+VYGG
Subjt:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAAS---------------RYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGG

Query:  TKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVSL
        TKSM MSLLR++TSSSCHSQLMQ +SSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKK+ +
Subjt:  TKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVSL

XP_038886062.1 RNA pseudouridine synthase 2, chloroplastic isoform X4 [Benincasa hispida]4.1e-23088.65Show/hide
Query:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
        MISVCSARTIQASPSSIQLFFPRNRRRIT DVLRFS NLSTR SD DEYGEAQSER AN+AGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
Subjt:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA

Query:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
        GLVSVNGRIIDK                                 VSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
Subjt:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG

Query:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP
        NATGTLVNAILNHCSLPMVATS GE PSDMDISDDEFSS+EIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFK HSIERVYISLTCGVP
Subjt:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP

Query:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSS
        PSTAGRIEVPICRDPNNRIRM AVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAK+MGIPLLGD+VYGGTKSM MSLLR++TSS
Subjt:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSS

Query:  SCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVSLILISFI
        SCHSQLMQ +SSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKV+LIL SFI
Subjt:  SCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVSLILISFI

XP_038886063.1 RNA pseudouridine synthase 2, chloroplastic isoform X5 [Benincasa hispida]2.0e-22485.89Show/hide
Query:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
        MISVCSARTIQASPSSIQLFFPRNRRRIT DVLRFS NLSTR SD DEYGEAQSER AN+AGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
Subjt:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA

Query:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
        GLVSVNGRIIDK                                 VSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
Subjt:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG

Query:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP
        NATGTLVNAILNHCSLPMVATS GE PSDMDISDDEFSS+EIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFK HSIERVYISLTCGVP
Subjt:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP

Query:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAAS---------------RYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGG
        PSTAGRIEVPICRDPNNRIRM AVSGTNNNPHAKHAAS               RYKVMEILAQGGSSLVEWRLETGRTHQIRAHAK+MGIPLLGD+VYGG
Subjt:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAAS---------------RYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGG

Query:  TKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVS
        TKSM MSLLR++TSSSCHSQLMQ +SSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKV+
Subjt:  TKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVS

TrEMBL top hitse value%identityAlignment
A0A0A0LKD7 Pseudouridine synthase1.1e-21784.75Show/hide
Query:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDD-DEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
        MISVCSARTIQASPS I  FFP NRRRI S+VLR S+N STRCS D DEY EAQSERIANYAG RLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
Subjt:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDD-DEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR

Query:  AGLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAP
        AGLVSVNGR+IDK                                 VSHNVKAGD+INCTISELQPLRAEPEDIDLDIVYED HVLVVNKPAHMVVHPAP
Subjt:  AGLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAP

Query:  GNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGV
        GNATGTLVNAILNHCSLPMVATS GE+ SD D+SDDEFSSI +FSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGV
Subjt:  GNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGV

Query:  PPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTS
        PPSTAGRIE+PICRDPNNRIRM A+ GT NNPHAK+AASRY VMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSM MSLLRT+ S
Subjt:  PPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTS

Query:  SSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKK
        S+CH QLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDF EILSQLREIGT+K
Subjt:  SSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKK

A0A1S3BCE4 Pseudouridine synthase5.7e-22285.25Show/hide
Query:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
        MISVCSARTIQASPSSI  FFPRNRRRI S+VLRFS N S+RCSD DEY EAQSERIANYAG RLEETVD+NPGKVRLDSWIS RINGISRARVQSSIRA
Subjt:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA

Query:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
        GLVSVNGR+IDK                                 VSHNVKAGD+INCTISELQPLRAEPEDIDLDIVYED HVLVVNKPAHMVVHPAPG
Subjt:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG

Query:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP
        NATGTLVNAILNHCSLPMV+TS GEH SD D+SDDEFSSIE+FSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP
Subjt:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP

Query:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSS
        PSTAGRIE+PICRDPNNRIRM A  GT NNPHAKHAASRY VMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSM MSLLRT+ SS
Subjt:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSS

Query:  SCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVSL
        +CH QLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKK+ +
Subjt:  SCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVSL

A0A1S3BD56 Pseudouridine synthase2.6e-22285.65Show/hide
Query:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
        MISVCSARTIQASPSSI  FFPRNRRRI S+VLRFS N S+RCSD DEY EAQSERIANYAG RLEETVD+NPGKVRLDSWIS RINGISRARVQSSIRA
Subjt:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA

Query:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
        GLVSVNGR+IDK                                 VSHNVKAGD+INCTISELQPLRAEPEDIDLDIVYED HVLVVNKPAHMVVHPAPG
Subjt:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG

Query:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP
        NATGTLVNAILNHCSLPMV+TS GEH SD D+SDDEFSSIE+FSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP
Subjt:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP

Query:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSS
        PSTAGRIE+PICRDPNNRIRM A  GT NNPHAKHAASRY VMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSM MSLLRT+ SS
Subjt:  PSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSS

Query:  SCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVS
        +CH QLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKV+
Subjt:  SCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVS

A0A6J1CMS3 Pseudouridine synthase1.9e-20982.86Show/hide
Query:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
        MISVCS R IQA+P SIQLFFPRNR RITS+V R +TN STRCSD DE GEA SERI NYAG+RLEE VDVN GK+RLDSWISCRINGISRARVQSSIRA
Subjt:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA

Query:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
        GLV+VNGR+IDK                                 VSHN+KAGDMINCTISELQPLRA+PEDIDLDIVYED HVLVVNKPAHMVVHPAPG
Subjt:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG

Query:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIF-SRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGV
        NATGTLVNAILNHCSLPMVATSNGE  SDMDISDDEFSS EI  SR SEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGV
Subjt:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIF-SRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGV

Query:  PPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTS
        PPSTAGRIEVPICRDPNNRIRM+AV  TN NPHAK+AASRYKV+EILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSM +SLLRT+TS
Subjt:  PPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTS

Query:  SSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVS
        SSCHSQLMQLVS+LERPCLHALTLGF+HP+TG+NIRFSCPPPTDFA+I SQL EIGTKKV+
Subjt:  SSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVS

A0A6J1KJA7 Pseudouridine synthase2.5e-20180.26Show/hide
Query:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA
        MISVCSAR IQA+P SIQLFFPRNR RI+ DVLR +TN S RCS  DE GE   E   NYAG+RLEE V  N GKVR+DSWISCRI+GISRARVQSSIRA
Subjt:  MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRA

Query:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG
        GLVSVNGR+I+K                                  SHNVKAGD INCTISELQPLRAEPEDIDLDIVYED HVLVVNKPAHMVVHPAPG
Subjt:  GLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPG

Query:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIF-SRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGV
        NATGTLVNAILNHCSLPMV T+N E  SDMDISDDE +SIEI  SRVSEAPIRPGIVHR+DKGTSGLLVVAKDEH+HAHLSAQFKQHSIERVYISLTCGV
Subjt:  NATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIF-SRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGV

Query:  PPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTS
        PPSTAGRIEVPI RDPNNRIRM+AVS TNNN HAK+AASRYKV+E LAQGG SLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSM MSLLRT+TS
Subjt:  PPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTS

Query:  SSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVS
        SS HSQLMQLVSSLERPCLHALTLGF+HPHTGKNIRFSCPPPTDFAEIL QLR+I TKKV+
Subjt:  SSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVS

SwissProt top hitse value%identityAlignment
O50310 Uncharacterized RNA pseudouridine synthase Cpar_07239.6e-4933.67Show/hide
Query:  TVDVNPGK--VRLDSWISCRINGISRARVQSSIRAGLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQP
        T+DV+  +  +R+D +++ ++  ++R +VQ++I  G V VNG+ +                                    ++ VK+ D I+ T      
Subjt:  TVDVNPGK--VRLDSWISCRINGISRARVQSSIRAGLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQP

Query:  LRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSG
            PEDI + I+YED  ++V++K A MVVHPA GN TGTL NAIL+H          G+   ++D                +  +RPGIVHRLDK TSG
Subjt:  LRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSG

Query:  LLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQ
        L+++AK+  +   L+ QF    +E+VY ++  GVP + +G I+  I R   NR  MA  +        KHA + Y+V+E L  G  SL++  L TGRTHQ
Subjt:  LLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQ

Query:  IRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVS
        IR H +++G  +LGDE YGG         RT   S        L+  + R  LHA TL F  P TG+ + FS P P D   +L ++R + T   S
Subjt:  IRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVS

P50513 Ribosomal large subunit pseudouridine synthase D3.9e-5041.39Show/hide
Query:  VKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEA
        +K+ D     I   +P   EP+DI L+IV+ED H+LVVNKPA MVVHPA GN   TLVNA+L HC+                    + S I         
Subjt:  VKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEA

Query:  PIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQG
          RPGIVHR+DK TSGLLVVAK + +HA L+AQF  HSI R Y ++  G  PS  G ++ P+ R   NR +MA VS    +   K A + Y+++  L   
Subjt:  PIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQG

Query:  GSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILS
         +SL+E RLETGRTHQ+R H   +G  LLGD VYG +K               H  L+Q + + +R  LHA  LGF+HP +GK + F    P D   +  
Subjt:  GSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILS

Query:  QL
         L
Subjt:  QL

Q3ECD0 RNA pseudouridine synthase 2, chloroplastic1.2e-13963.75Show/hide
Query:  NYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINC
        N AG+R+EE VD   GK+RLDSWIS RING+SRARVQSSIR GLV+VNGR++DK                                 VSHNVK+GD +NC
Subjt:  NYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINC

Query:  TISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMD---ISDDEFSSIEIFSRVSEAPIRPGI
        TISELQPL+AE EDI LDIVYED HVLVVNKPAHMVVHPAPGN TGTLVN IL+HCSLP V  SN E   D D    SDDE  +    S    A +RPGI
Subjt:  TISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMD---ISDDEFSSIEIFSRVSEAPIRPGI

Query:  VHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVE
        VHRLDKGT+GLLVVAKDEHSHAHL+ QFK H+IERVY+SLT GVP    GRIE+PI RD +NRIRMAA+ G      A+HAASRYKV+E  A GGS+LVE
Subjt:  VHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVE

Query:  WRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIG
        WRLETGRTHQIRAHAKYMG+PLLGDEVYGGTKSM +SLL+ + S S   ++++L+S ++RPCLHA+ LGF HP TG+ ++FSCPPP+D AEI+  LR  G
Subjt:  WRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIG

Q45480 Uncharacterized RNA pseudouridine synthase YlyB9.6e-4933.77Show/hide
Query:  RLDSWISCRINGISRARVQSSIRAGLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLD
        R+D +++   N  SR +VQ  ++ G V VNG  +                                    ++ ++ GD +  T+ E + L    E +DLD
Subjt:  RLDSWISCRINGISRARVQSSIRAGLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLD

Query:  IVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSH
        I YED  VLVVNKP  MVVHPAPG+ TGTLVN ++ HC+                    + S I          +RPGIVHR+DK TSGLL+VAK++ +H
Subjt:  IVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSH

Query:  AHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIP
          L  Q    ++ R Y ++  G+     G I+ PI RD  +R  M            K+A + + V+E       +LVE +LETGRTHQIR H KY+G P
Subjt:  AHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIP

Query:  LLGDEVYGGTKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIG
        L GD  YG  K++                            LHA  LGF HP TG+ + F  P P D AE++  LR+ G
Subjt:  LLGDEVYGGTKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIG

Q5Z8P2 RNA pseudouridine synthase 2, chloroplastic2.2e-13355.97Show/hide
Query:  ARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQS-ERIANYAGIRLEETVDVNPGKVRLDSWISCRI--NGISRARVQSSIRAGLV
        A T  ASP +I        RR      R       RC   D   EA +  R   + G RLEE V    G+ R+D+WIS R+   G+SRAR+Q+SIRAGLV
Subjt:  ARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQS-ERIANYAGIRLEETVDVNPGKVRLDSWISCRI--NGISRARVQSSIRAGLV

Query:  SVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNAT
         VNGR + K                                 VSH VK GD+++CT+ ELQPLRAEPEDI LDIVYED H+LVVNKPAHMVVHPAPGNA 
Subjt:  SVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNAT

Query:  GTLVNAILNHCSLPMVA-----TSNGEHP----SDMDISD-DEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYI
        GTLVNAIL+HC +         + + E P     D+D+ D D+F++ E+ S V EA +RPGIVHRLDKGTSGLLVVAKDEHSHA L+ QFK H+I RVYI
Subjt:  GTLVNAILNHCSLPMVA-----TSNGEHP----SDMDISD-DEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYI

Query:  SLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSL
        SLTCG P   +GRIEVPI RDPNNRIRM A  G+ +  +A+HAASRYKV E+ A GGS+LVEWRLETGRTHQIRAHAKY+GIPLLGDE YGGTKSM +SL
Subjt:  SLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSL

Query:  LRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREI
        LR +T S  H  L  ++S ++RPCLHA  LGF HPH+GK + FSCPPP DF E+L++L ++
Subjt:  LRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREI

Arabidopsis top hitse value%identityAlignment
AT1G76050.1 Pseudouridine synthase family protein3.0e-9062.68Show/hide
Query:  NYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINC
        N AG+R+EE VD   GK+RLDSWIS RING+SRARVQSSIR GLV+VNGR++DK                                 VSHNVK+GD +NC
Subjt:  NYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINC

Query:  TISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMD---ISDDEFSSIEIFSRVSEAPIRPGI
        TISELQPL+AE EDI LDIVYED HVLVVNKPAHMVVHPAPGN TGTLVN IL+HCSLP V  SN E   D D    SDDE  +    S    A +RPGI
Subjt:  TISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMD---ISDDEFSSIEIFSRVSEAPIRPGI

Query:  VHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASR
        VHRLDKGT+GLLVVAKDEHSHAHL+ QFK H+IERVY+SLT GVP    GRIE+PI RD +NRIRMAA+ G      A+HAASR
Subjt:  VHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASR

AT1G76050.2 Pseudouridine synthase family protein8.4e-14163.75Show/hide
Query:  NYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINC
        N AG+R+EE VD   GK+RLDSWIS RING+SRARVQSSIR GLV+VNGR++DK                                 VSHNVK+GD +NC
Subjt:  NYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINC

Query:  TISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMD---ISDDEFSSIEIFSRVSEAPIRPGI
        TISELQPL+AE EDI LDIVYED HVLVVNKPAHMVVHPAPGN TGTLVN IL+HCSLP V  SN E   D D    SDDE  +    S    A +RPGI
Subjt:  TISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMD---ISDDEFSSIEIFSRVSEAPIRPGI

Query:  VHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVE
        VHRLDKGT+GLLVVAKDEHSHAHL+ QFK H+IERVY+SLT GVP    GRIE+PI RD +NRIRMAA+ G      A+HAASRYKV+E  A GGS+LVE
Subjt:  VHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVE

Query:  WRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIG
        WRLETGRTHQIRAHAKYMG+PLLGDEVYGGTKSM +SLL+ + S S   ++++L+S ++RPCLHA+ LGF HP TG+ ++FSCPPP+D AEI+  LR  G
Subjt:  WRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIG

AT3G52260.1 Pseudouridine synthase family protein3.1e-1026.72Show/hide
Query:  PLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTS
        P +       L+++YED  ++ +NKP+ + V P  G      V   L  C                      F   + +    E+P  P  VHRL +GTS
Subjt:  PLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTS

Query:  GLLVVAKDEHSHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEVPI--CRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEI
        G+L+ AK + +   L+A F +                   + ++Y +L  G+       I+ PI   R P     +   S     P  K A S+  V+E 
Subjt:  GLLVVAKDEHSHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEVPI--CRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEI

Query:  LAQGGSSLVEWRLETGRTHQIRAHAKYMGIPL
          +   SLV+  +++GR HQIR H  YMG PL
Subjt:  LAQGGSSLVEWRLETGRTHQIRAHAKYMGIPL

AT3G52260.2 Pseudouridine synthase family protein1.5e-1227.31Show/hide
Query:  PLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTS
        P +       L+++YED  ++ +NKP+ + V P  G      V   L  C                      F   + +    E+P  P  VHRL +GTS
Subjt:  PLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTS

Query:  GLLVVAKDEHSHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEVPI--CRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEI
        G+L+ AK + +   L+A F +                   + ++Y +L  G+       I+ PI   R P     +   S     P  K A S+  V+E 
Subjt:  GLLVVAKDEHSHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEVPI--CRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEI

Query:  LAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVY
          +   SLV+  +++GR HQIR H  YMG PL+GD +Y
Subjt:  LAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVY

AT3G52260.3 Pseudouridine synthase family protein6.2e-1125.82Show/hide
Query:  PLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTS
        P +       L+++YED  ++ +NKP+ + V P  G      V   L  C                      F   + +    E+P  P  VHRL +GTS
Subjt:  PLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTS

Query:  GLLVVAKDEHSHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEVPI--CRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEI
        G+L+ AK + +   L+A F +                   + ++Y +L  G+       I+ PI   R P     +   S     P  K A S+  V+E 
Subjt:  GLLVVAKDEHSHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEVPI--CRDPNNRIRMAAVSGTNNNPHAKHAASRYKVMEI

Query:  LAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSM
          +   SLV+  +++GR HQIR H  YMG PL+   ++ G++ +
Subjt:  LAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCCGTTTGCTCTGCTAGAACAATTCAAGCTTCACCCTCTTCTATTCAGTTGTTTTTCCCTCGAAATCGTAGAAGAATCACTTCCGATGTTCTTCGATTT
TCCACCAATCTCTCCACTAGATGCTCGGATGACGATGAATATGGTGAAGCTCAATCCGAACGGATAGCCAATTACGCCGGAATCAGACTGGAAGAGACCGTGGAC
GTAAATCCTGGTAAAGTTCGTCTTGATTCTTGGATATCTTGCCGCATTAACGGCATTAGTAGGGCTCGTGTTCAGTCCAGTATTAGGGCGGGACTAGTTTCAGTC
AATGGCCGAATTATCGATAAGGTAGCGACATTTTTCCGTAGAGAGAAGCTACATTTGATGACTTTGTTTTATTTTTATTTATTTAGCTTCTTTCAGTTTTACTGC
TATGGCTATCAAATGGTTTCTCACAATGTAAAAGCTGGGGATATGATCAATTGTACAATTTCCGAGTTGCAACCATTGAGAGCTGAACCCGAAGATATTGATCTG
GATATAGTTTATGAAGATGCACATGTTTTAGTCGTAAACAAACCAGCGCACATGGTTGTTCATCCAGCACCTGGAAATGCGACAGGAACACTAGTAAATGCCATT
CTTAACCACTGCAGTCTCCCAATGGTTGCAACATCAAATGGGGAGCATCCGTCGGATATGGATATTTCTGATGACGAGTTCAGTTCAATTGAAATTTTTTCTAGA
GTTTCTGAGGCACCTATTCGTCCTGGTATTGTGCATAGGTTAGATAAAGGAACTAGTGGATTGCTTGTTGTTGCCAAGGATGAACATTCCCATGCTCACTTATCT
GCTCAATTCAAGCAACACTCAATTGAGAGAGTTTATATCAGTCTCACATGTGGAGTTCCTCCCTCAACTGCTGGACGTATTGAGGTACCAATTTGCCGTGATCCG
AACAATCGTATACGCATGGCTGCAGTATCTGGAACAAATAACAATCCACATGCAAAGCACGCTGCTAGTAGGTACAAAGTTATGGAAATTTTAGCTCAAGGAGGT
TCTTCATTGGTTGAGTGGAGATTAGAAACAGGCCGCACACATCAGATCCGTGCACACGCGAAGTATATGGGAATACCGTTACTTGGAGATGAGGTCTATGGAGGT
ACTAAGAGCATGGTCATGTCGCTGCTTCGAACTAAAACATCATCTAGTTGTCACAGCCAACTTATGCAACTTGTTTCTTCATTAGAGAGGCCCTGTCTTCATGCT
CTGACTCTTGGGTTTGTACATCCTCACACAGGGAAGAATATACGATTTTCATGCCCACCTCCAACAGATTTTGCTGAAATTTTGAGTCAGCTTCGTGAAATAGGC
ACAAAAAAGGTATCCCTTATTTTGATTTCTTTCATTTATTTACTCGAGCCAAGCTCTTTGCATGGTAATTGGTTATTTTGCAGATTTAGCATCCAACCATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCCGTTTGCTCTGCTAGAACAATTCAAGCTTCACCCTCTTCTATTCAGTTGTTTTTCCCTCGAAATCGTAGAAGAATCACTTCCGATGTTCTTCGATTT
TCCACCAATCTCTCCACTAGATGCTCGGATGACGATGAATATGGTGAAGCTCAATCCGAACGGATAGCCAATTACGCCGGAATCAGACTGGAAGAGACCGTGGAC
GTAAATCCTGGTAAAGTTCGTCTTGATTCTTGGATATCTTGCCGCATTAACGGCATTAGTAGGGCTCGTGTTCAGTCCAGTATTAGGGCGGGACTAGTTTCAGTC
AATGGCCGAATTATCGATAAGGTAGCGACATTTTTCCGTAGAGAGAAGCTACATTTGATGACTTTGTTTTATTTTTATTTATTTAGCTTCTTTCAGTTTTACTGC
TATGGCTATCAAATGGTTTCTCACAATGTAAAAGCTGGGGATATGATCAATTGTACAATTTCCGAGTTGCAACCATTGAGAGCTGAACCCGAAGATATTGATCTG
GATATAGTTTATGAAGATGCACATGTTTTAGTCGTAAACAAACCAGCGCACATGGTTGTTCATCCAGCACCTGGAAATGCGACAGGAACACTAGTAAATGCCATT
CTTAACCACTGCAGTCTCCCAATGGTTGCAACATCAAATGGGGAGCATCCGTCGGATATGGATATTTCTGATGACGAGTTCAGTTCAATTGAAATTTTTTCTAGA
GTTTCTGAGGCACCTATTCGTCCTGGTATTGTGCATAGGTTAGATAAAGGAACTAGTGGATTGCTTGTTGTTGCCAAGGATGAACATTCCCATGCTCACTTATCT
GCTCAATTCAAGCAACACTCAATTGAGAGAGTTTATATCAGTCTCACATGTGGAGTTCCTCCCTCAACTGCTGGACGTATTGAGGTACCAATTTGCCGTGATCCG
AACAATCGTATACGCATGGCTGCAGTATCTGGAACAAATAACAATCCACATGCAAAGCACGCTGCTAGTAGGTACAAAGTTATGGAAATTTTAGCTCAAGGAGGT
TCTTCATTGGTTGAGTGGAGATTAGAAACAGGCCGCACACATCAGATCCGTGCACACGCGAAGTATATGGGAATACCGTTACTTGGAGATGAGGTCTATGGAGGT
ACTAAGAGCATGGTCATGTCGCTGCTTCGAACTAAAACATCATCTAGTTGTCACAGCCAACTTATGCAACTTGTTTCTTCATTAGAGAGGCCCTGTCTTCATGCT
CTGACTCTTGGGTTTGTACATCCTCACACAGGGAAGAATATACGATTTTCATGCCCACCTCCAACAGATTTTGCTGAAATTTTGAGTCAGCTTCGTGAAATAGGC
ACAAAAAAGGTATCCCTTATTTTGATTTCTTTCATTTATTTACTCGAGCCAAGCTCTTTGCATGGTAATTGGTTATTTTGCAGATTTAGCATCCAACCATCATAA
TGAAGAACAATATAATAAATGGCCCAATTGACACAAACAACCTCATTCATCGCCACCCAGATAGCTGATAAGTGCATCCTTTGTGCCTCTTTTCTGGCTGTCCCC
TTGACATGTTAGCTAATAGCCTAATACCAAGTCTTCTCTATTTGCTAGTCATATTTCACCTGTTTCTTGCGTTTGGAATGACTATTTTATTGATTTACAGTTCTT
TTGTACTTCATCTCTAAC
Protein sequenceShow/hide protein sequence
MISVCSARTIQASPSSIQLFFPRNRRRITSDVLRFSTNLSTRCSDDDEYGEAQSERIANYAGIRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSV
NGRIIDKVATFFRREKLHLMTLFYFYLFSFFQFYCYGYQMVSHNVKAGDMINCTISELQPLRAEPEDIDLDIVYEDAHVLVVNKPAHMVVHPAPGNATGTLVNAI
LNHCSLPMVATSNGEHPSDMDISDDEFSSIEIFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPICRDP
NNRIRMAAVSGTNNNPHAKHAASRYKVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMVMSLLRTKTSSSCHSQLMQLVSSLERPCLHA
LTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKKVSLILISFIYLLEPSSLHGNWLFCRFSIQPS