| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6598510.1 DNA-directed RNA polymerase I subunit RPA12, partial [Cucurbita argyrosperma subsp. sororia] | 3.1e-61 | 83.11 | Show/hide |
Query: VYEPNQFTVQLPVQPSKTQNLEKLLGKQQEPLMAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEK
+Y Q + +P K+ +LE LG+ P MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEI+GREISYTVTAEEIRKQLGISLIDEEK
Subjt: VYEPNQFTVQLPVQPSKTQNLEKLLGKQQEPLMAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEK
Query: MQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN
MQL+KERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN
Subjt: MQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN
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| XP_022144336.1 DNA-directed RNA polymerase I subunit RPA12-like [Momordica charantia] | 1.1e-58 | 98.28 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEK+QL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_022997634.1 DNA-directed RNA polymerase I subunit RPA12-like [Cucurbita maxima] | 2.5e-58 | 98.28 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAK IIGREISYTVTAEEIRKQLGISLIDEEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_023546814.1 DNA-directed RNA polymerase I subunit RPA12-like [Cucurbita pepo subsp. pepo] | 5.0e-59 | 98.28 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEI+GREISYTVTAEEIRKQLGISLIDEEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_038886279.1 DNA-directed RNA polymerase I subunit RPA12-like isoform X1 [Benincasa hispida] | 2.5e-58 | 97.41 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFSSTKYV+CPLCKS+RSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LKC4 DNA-directed RNA polymerase subunit | 2.0e-58 | 97.41 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSF STKYVECP CKSRRSAKEI+GREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A1S3BBZ4 DNA-directed RNA polymerase subunit | 2.9e-57 | 96.55 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSF STKYVECPLCKS+RSAKEI GREISYTVTAEEIRKQLGISLI EEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A6J1CTE6 DNA-directed RNA polymerase subunit | 5.4e-59 | 98.28 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEK+QL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A6J1HDS4 DNA-directed RNA polymerase subunit | 1.6e-58 | 97.41 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYS GHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEI+GREISYTVTAEEIRKQLGISLIDEEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A6J1KC19 DNA-directed RNA polymerase subunit | 1.2e-58 | 98.28 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAK IIGREISYTVTAEEIRKQLGISLIDEEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O94703 DNA-directed RNA polymerase I subunit RPA12 | 3.4e-10 | 29.73 | Show/hide |
Query: LFCNLCGTMLSFSSTKYVECPLCK----SRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYT
+FC+ CG +L ++ ++ C C+ S + A ++ + S + ++ + I ++ +K + A +C KCGND F + Q+RSADEG T FY
Subjt: LFCNLCGTMLSFSSTKYVECPLCK----SRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYT
Query: CTKCHHQTREN
C +C ++ N
Subjt: CTKCHHQTREN
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| Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 | 9.0e-11 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFSSTK-YVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFSSTK-YVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
T C Q +E+
Subjt: TKCHHQTREN
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| Q1XHV8 DNA-directed RNA polymerase I subunit RPA12 | 1.2e-10 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFSSTK-YVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC+ CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFSSTK-YVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
T C Q +E+
Subjt: TKCHHQTREN
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| Q5TM50 DNA-directed RNA polymerase I subunit RPA12 | 6.9e-11 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFSSTK-YVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC+ CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFSSTK-YVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
T C Q +E+
Subjt: TKCHHQTREN
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| Q9P1U0 DNA-directed RNA polymerase I subunit RPA12 | 1.2e-10 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFSSTK-YVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC+ CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFSSTK-YVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
T C Q +E+
Subjt: TKCHHQTREN
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G01210.1 DNA-directed RNA polymerase, subunit M, archaeal | 1.4e-06 | 28.97 | Show/hide |
Query: FCNLCGTMLSF--SSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTK
FC CG +L + C C I R++ ++K + + ++ A+ C +CG+D+A+F+S Q+RSADE ++ FY C K
Subjt: FCNLCGTMLSF--SSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTK
Query: CHHQTRE
C RE
Subjt: CHHQTRE
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| AT1G20065.1 FUNCTIONS IN: molecular_function unknown | 2.9e-17 | 62.9 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGIS
M SR D LFCNLCGTML STKY ECPLC++ R+ KEII + ++YTVT E+IR++LGIS
Subjt: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGIS
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| AT1G20065.2 FUNCTIONS IN: molecular_function unknown | 1.5e-13 | 62.26 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAE
M SR D LFCNLCGTML STKY ECPLC++ R+ KEII + ++YTVT E
Subjt: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAE
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| AT3G25940.1 TFIIB zinc-binding protein | 9.4e-32 | 56.78 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEE---KMQLAKERRRCEKCGNDEAWFESRQMRSAD
M SR +FLFCNLCGTML STKY ECP CK+ R+AK+II +EI+YTV+AE+IR++LGISL E+ + +L K ++ CEKC + E + +RQ RSAD
Subjt: MAYSRGHDFLFCNLCGTMLSFSSTKYVECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEE---KMQLAKERRRCEKCGNDEAWFESRQMRSAD
Query: EGQTTFYTCTKCHHQTRE
EGQTT+YTC C H+ E
Subjt: EGQTTFYTCTKCHHQTRE
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| AT4G07950.1 DNA-directed RNA polymerase, subunit M, archaeal | 1.1e-06 | 29.09 | Show/hide |
Query: FCNLCGTMLSF---SSTKYV--ECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYT
FC CG +L + S+++ CP + EI +++ ++K + + ++ A+ C +CG+D+A+F+S Q+RSADE ++ FY
Subjt: FCNLCGTMLSF---SSTKYV--ECPLCKSRRSAKEIIGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYT
Query: CTKCHHQTRE
C KC RE
Subjt: CTKCHHQTRE
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