; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG08G014830 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G014830
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptiontRNA-methyltransferase non-catalytic subunit trm6MTase subunit
Genome locationCG_Chr08:27607730..27608533
RNA-Seq ExpressionClCG08G014830
SyntenyClCG08G014830
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065217.1 uncharacterized protein E6C27_scaffold82G005550 [Cucumis melo var. makuwa]1.7e-8170.9Show/hide
Query:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSVKALKAI+I NYSRRRKLKWLFEFFVFLFLVS+RSS  SLA P+LHH F+R+L VLNSHIFVF+VFHAMLFVVYSLSHLTDNKSGSNR + +
Subjt:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDGDLPESLVA-PIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETAEIIRDTKRYR
        S       ESLVA P+D SV E     E  PVI DSIAE PAE+             TTEL I+A ++T   P  P SPVRHLNA ME AEII + KRYR
Subjt:  SGRDGDLPESLVA-PIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETAEIIRDTKRYR

Query:  RTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVSG
        RTESERFEENRE SKFRRSKTEI  R    EL  F++ VDEMDIDDFNRTVESFIAEQKMHIGGRVSG
Subjt:  RTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVSG

KAG6585580.1 hypothetical protein SDJN03_18313, partial [Cucurbita argyrosperma subsp. sororia]2.0e-6158.66Show/hide
Query:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSV   KAI++ N  RRRKLKWLFEF +FLFLV  RSSL SLA P   H FRR+LVVLNSH FVF+VFHAMLFVVYSLSHLTDN SGSNR DAE
Subjt:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDG--------DLPESLVAPIDDSVAEILVVGEITPV---------IGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLN
        S  D         D PESL+A  DDSV + LVV E             + DS+AE   EK     V   + + TT         TTTAP +P SPV HL 
Subjt:  SGRDG--------DLPESLVAPIDDSVAEILVVGEITPV---------IGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLN

Query:  AVMETAEIIRDTKRYRRTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVS
               II +T++YRRTESERFEENR+ +K RRSKTEI RRE   E  +  +SV+EMDIDDFNR VE FIAEQK+HIGGR+S
Subjt:  AVMETAEIIRDTKRYRRTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVS

KAG7020495.1 hypothetical protein SDJN02_17180, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-6258.66Show/hide
Query:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSV   KAI++ N  RRRKLKWLFEF +FLFLV  RSSL SLA P   H FRR+LVVLNSH FVF++FHAMLFVVYSLSH TDN SGSNR DAE
Subjt:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDG--------DLPESLVAPIDDSVAEILVVGEITPV---------IGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLN
        S  D         D PESL+A  DDSV + LVV E             + DS+AE   EK        + + TTT         TTTAP +PVSPV HL 
Subjt:  SGRDG--------DLPESLVAPIDDSVAEILVVGEITPV---------IGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLN

Query:  AVMETAEIIRDTKRYRRTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVS
               II +T++YRRTESERFEENRE +K RRSKTEI RRE   E  +  +SV+EMDIDDFNR VE FIAEQK+HIGGR+S
Subjt:  AVMETAEIIRDTKRYRRTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVS

XP_011650191.1 uncharacterized protein LOC105434756 [Cucumis sativus]5.2e-7869.03Show/hide
Query:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSVKALK I+I NY RR KLKWLFEFFVFLFLVS+RSS  SLA P+LH  F+R+LVVLNSHIFVF+VFHAMLF+VYSLSHLTDNKSGSN  + +
Subjt:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDGDLPESLVA-PIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETAEIIRDTKRYR
        S       ESLVA P+D SV E     E  PVI DSIAEPPAE+             TTE+ I+AA++  TA LSP  PV+HLNAVME AEII + KRYR
Subjt:  SGRDGDLPESLVA-PIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETAEIIRDTKRYR

Query:  RTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVSG
        RTESERFEEN+E  KFRR KTEI  RE   EL  F+  VDEMDIDDFNRTVESFIAEQKMHIGGRVSG
Subjt:  RTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVSG

XP_023002474.1 uncharacterized protein LOC111496300 [Cucurbita maxima]1.5e-6157.25Show/hide
Query:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSV   KAI++ N  RRRKLKWLFEF +FLFLV  RSSL SLA P   H FRR+LVVLNSH FVF+VFHAMLFVVYSLSHLTDN SGSNR + E
Subjt:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDG--------DLPESLVAPIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAIS--AAEETTTAPLSPVSPVRHLNAVMETAE
        S  D         + PES++A  DDSV + LVV +      +++A P  +        + AE+ T + ++S  + + TTT   +P SPV HL        
Subjt:  SGRDG--------DLPESLVAPIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAIS--AAEETTTAPLSPVSPVRHLNAVMETAE

Query:  IIRDTKRYRRTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVS
        II +T++YRRTESERFE+NRE +K RRSKTEI RRE   E K+  +SV+EMDIDDFNR VESFIAEQK+HIGGR+S
Subjt:  IIRDTKRYRRTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVS

TrEMBL top hitse value%identityAlignment
A0A0A0LNN4 Uncharacterized protein2.5e-7869.03Show/hide
Query:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSVKALK I+I NY RR KLKWLFEFFVFLFLVS+RSS  SLA P+LH  F+R+LVVLNSHIFVF+VFHAMLF+VYSLSHLTDNKSGSN  + +
Subjt:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDGDLPESLVA-PIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETAEIIRDTKRYR
        S       ESLVA P+D SV E     E  PVI DSIAEPPAE+             TTE+ I+AA++  TA LSP  PV+HLNAVME AEII + KRYR
Subjt:  SGRDGDLPESLVA-PIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETAEIIRDTKRYR

Query:  RTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVSG
        RTESERFEEN+E  KFRR KTEI  RE   EL  F+  VDEMDIDDFNRTVESFIAEQKMHIGGRVSG
Subjt:  RTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVSG

A0A5A7VDR7 Uncharacterized protein8.3e-8270.9Show/hide
Query:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSVKALKAI+I NYSRRRKLKWLFEFFVFLFLVS+RSS  SLA P+LHH F+R+L VLNSHIFVF+VFHAMLFVVYSLSHLTDNKSGSNR + +
Subjt:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDGDLPESLVA-PIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETAEIIRDTKRYR
        S       ESLVA P+D SV E     E  PVI DSIAE PAE+             TTEL I+A ++T   P  P SPVRHLNA ME AEII + KRYR
Subjt:  SGRDGDLPESLVA-PIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETAEIIRDTKRYR

Query:  RTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVSG
        RTESERFEENRE SKFRRSKTEI  R    EL  F++ VDEMDIDDFNRTVESFIAEQKMHIGGRVSG
Subjt:  RTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVSG

A0A6J1CSG5 uncharacterized protein LOC1110139081.4e-5756.93Show/hide
Query:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDA-
        MVLNGFDSV   KAI + N++RRRKLKWLFE  VFLFL+S RS+  S A PVL H FR+L+ VLNSHIFVF+ F+ MLFVVYSLS LT+ K  SNR DA 
Subjt:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDA-

Query:  --ESGRDGDLPESLVAPIDDSVAEILVVGE----ITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETA-EII
               G+ PESLVAP DDS+AEILVV E     +PV G +IA  P           AAE  T ++   +          P+ P  +  +V E A EII
Subjt:  --ESGRDGDLPESLVAPIDDSVAEILVVGE----ITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETA-EII

Query:  RDTKRYRRTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVS
         +TK+YRRTESERF E RE +KFRRSKTEI RRE   E  RF+ SV EMDI+DFNRTVESFIAEQK+HIG  +S
Subjt:  RDTKRYRRTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVS

A0A6J1KQJ8 uncharacterized protein LOC1114963007.3e-6257.25Show/hide
Query:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSV   KAI++ N  RRRKLKWLFEF +FLFLV  RSSL SLA P   H FRR+LVVLNSH FVF+VFHAMLFVVYSLSHLTDN SGSNR + E
Subjt:  MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDG--------DLPESLVAPIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAIS--AAEETTTAPLSPVSPVRHLNAVMETAE
        S  D         + PES++A  DDSV + LVV +      +++A P  +        + AE+ T + ++S  + + TTT   +P SPV HL        
Subjt:  SGRDG--------DLPESLVAPIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAIS--AAEETTTAPLSPVSPVRHLNAVMETAE

Query:  IIRDTKRYRRTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVS
        II +T++YRRTESERFE+NRE +K RRSKTEI RRE   E K+  +SV+EMDIDDFNR VESFIAEQK+HIGGR+S
Subjt:  IIRDTKRYRRTESERFEENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVS

A0A6P3YRJ9 uncharacterized protein LOC1074036851.4e-1231.46Show/hide
Query:  FDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLS-------HLTDNKSGSNRPD
        FD VKA KAIA+  Y  RRKLKWLFE    LF ++  ++ L +A+       R+L+ V  SH+FVFV+F+ ++F++Y+LS       HL+ + SG +  D
Subjt:  FDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLS-------HLTDNKSGSNRPD

Query:  ---AESGRDGDLPESLVAPIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETAEIIRDT
           + S     +     +P      E+ V  +   +  +++A PP++                             P    S VR  +AV          
Subjt:  ---AESGRDGDLPESLVAPIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETAEIIRDT

Query:  KRYRRTESERFE----ENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQK
        K YRRT+SE F     E  +  +F+RS TEI   EPG   +R  +  D+M  D+FN  +E+FIA  K
Subjt:  KRYRRTESERFE----ENRETSKFRRSKTEISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCAATGGATTCGATTCCGTCAAGGCCTTGAAGGCCATTGCCATCGTGAATTACAGCCGCCGCCGGAAGCTCAAGTGGTTATTCGAGTTTTTTGTGTTCTTGTT
CCTCGTTTCCAGCCGGTCCAGTTTGTTATCTCTCGCCAGTCCGGTCCTCCACCATATTTTCCGGCGACTCCTCGTCGTCCTCAACAGTCACATCTTCGTCTTCGTCGTTT
TCCACGCCATGCTCTTCGTCGTTTACTCTCTCTCCCATTTGACCGACAATAAATCCGGTTCGAACCGGCCAGACGCCGAGTCCGGACGCGACGGCGATTTGCCGGAGAGT
TTGGTCGCTCCGATTGACGATTCCGTCGCCGAGATATTAGTTGTCGGGGAGATAACGCCGGTGATCGGAGATTCAATCGCTGAACCTCCGGCGGAGAAGAAGACGACGGA
TCTGGTTATCGCTGCGGCGGAGGAGACCACGACGGAGTTGGCTATTTCTGCGGCGGAGGAGACGACGACGGCGCCGTTGTCTCCGGTCTCTCCAGTCCGGCATTTGAACG
CCGTGATGGAAACGGCGGAGATCATACGGGATACAAAACGGTACCGGAGGACGGAATCGGAGAGATTTGAAGAGAATCGAGAAACGAGCAAGTTTCGGCGATCGAAAACG
GAGATTAGCCGGAGGGAACCCGGCGGAGAACTGAAGAGATTTTTGAATTCAGTGGACGAGATGGACATCGACGATTTCAATCGGACGGTGGAGAGCTTCATAGCGGAACA
GAAGATGCACATCGGCGGAAGGGTTTCCGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTCAATGGATTCGATTCCGTCAAGGCCTTGAAGGCCATTGCCATCGTGAATTACAGCCGCCGCCGGAAGCTCAAGTGGTTATTCGAGTTTTTTGTGTTCTTGTT
CCTCGTTTCCAGCCGGTCCAGTTTGTTATCTCTCGCCAGTCCGGTCCTCCACCATATTTTCCGGCGACTCCTCGTCGTCCTCAACAGTCACATCTTCGTCTTCGTCGTTT
TCCACGCCATGCTCTTCGTCGTTTACTCTCTCTCCCATTTGACCGACAATAAATCCGGTTCGAACCGGCCAGACGCCGAGTCCGGACGCGACGGCGATTTGCCGGAGAGT
TTGGTCGCTCCGATTGACGATTCCGTCGCCGAGATATTAGTTGTCGGGGAGATAACGCCGGTGATCGGAGATTCAATCGCTGAACCTCCGGCGGAGAAGAAGACGACGGA
TCTGGTTATCGCTGCGGCGGAGGAGACCACGACGGAGTTGGCTATTTCTGCGGCGGAGGAGACGACGACGGCGCCGTTGTCTCCGGTCTCTCCAGTCCGGCATTTGAACG
CCGTGATGGAAACGGCGGAGATCATACGGGATACAAAACGGTACCGGAGGACGGAATCGGAGAGATTTGAAGAGAATCGAGAAACGAGCAAGTTTCGGCGATCGAAAACG
GAGATTAGCCGGAGGGAACCCGGCGGAGAACTGAAGAGATTTTTGAATTCAGTGGACGAGATGGACATCGACGATTTCAATCGGACGGTGGAGAGCTTCATAGCGGAACA
GAAGATGCACATCGGCGGAAGGGTTTCCGGCTAA
Protein sequenceShow/hide protein sequence
MVLNGFDSVKALKAIAIVNYSRRRKLKWLFEFFVFLFLVSSRSSLLSLASPVLHHIFRRLLVVLNSHIFVFVVFHAMLFVVYSLSHLTDNKSGSNRPDAESGRDGDLPES
LVAPIDDSVAEILVVGEITPVIGDSIAEPPAEKKTTDLVIAAAEETTTELAISAAEETTTAPLSPVSPVRHLNAVMETAEIIRDTKRYRRTESERFEENRETSKFRRSKT
EISRREPGGELKRFLNSVDEMDIDDFNRTVESFIAEQKMHIGGRVSG