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ClCG08G016230 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G016230
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr08:28646647..28647123
RNA-Seq ExpressionClCG08G016230
SyntenyClCG08G016230
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060930.1 hypothetical protein E6C27_scaffold501G00630 [Cucumis melo var. makuwa]1.8e-4475.97Show/hide
Query:  MNNWPCVCTKSNVPNSVEKDGKRKKLKAETEELGNFPILLLDSFVDSKARMKRGCFGVFAVMILLAMVFVRVDGRPLRSRAETPLTTGIGRVEKVTAGNS
        MNN  CVCTKSNVPNSVE DGKRKKLKA+++ELGNF    LDS VDSKARMK   FGVFAVMILLAMVFV VD R LRSR ET  T G GRVEKVT G++
Subjt:  MNNWPCVCTKSNVPNSVEKDGKRKKLKAETEELGNFPILLLDSFVDSKARMKRGCFGVFAVMILLAMVFVRVDGRPLRSRAETPLTTGIGRVEKVTAGNS

Query:  TAFVTFGGHRKGRWAFKHASGPSMRGPGH
        +  V+F GHRKG WAFKHASGPSMRGPGH
Subjt:  TAFVTFGGHRKGRWAFKHASGPSMRGPGH
KAE8652069.1 hypothetical protein Csa_018550 [Cucumis sativus]2.7e-4072.09Show/hide
Query:  MNNWPCVCTKSNVPNSVEKDGKRKKLKAETEELGNFPILLLDSFVDSKARMKRGCFGVFAVMILLAMVFVRVDGRPLRSRAETPLTTGIGRVEKVTAGNS
        MNNW CVCTKSNVPNSVE DGKRKKLKA+++E        L  FVDSKARMK   FGVFAVM LLAMVFV VD R LRSR ET  T G GRVEKVT G++
Subjt:  MNNWPCVCTKSNVPNSVEKDGKRKKLKAETEELGNFPILLLDSFVDSKARMKRGCFGVFAVMILLAMVFVRVDGRPLRSRAETPLTTGIGRVEKVTAGNS

Query:  TAFVTFGGHRKGRWAFKHASGPSMRGPGH
           V+F GHRKG WAFKHASGPSMRGPGH
Subjt:  TAFVTFGGHRKGRWAFKHASGPSMRGPGH
KAG6585686.1 hypothetical protein SDJN03_18419, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1768.35Show/hide
Query:  MKRGCFGVFAVMILLAMVFVRVDGRPLRSRAETPLTTGIGRVEKVTAGNSTAFVTFGGHRKGRWAFKHASGPSMRGPGH
        MKR C GV AVMILLAMVFV VD R L S  +T    G GR E V  GN+T FV FGG RKGRWAFKH SGPS RGPGH
Subjt:  MKRGCFGVFAVMILLAMVFVRVDGRPLRSRAETPLTTGIGRVEKVTAGNSTAFVTFGGHRKGRWAFKHASGPSMRGPGH
TrEMBL top hitse value%identityAlignment
A0A0A0LKP9 Uncharacterized protein1.4e-2173.42Show/hide
Query:  MKRGCFGVFAVMILLAMVFVRVDGRPLRSRAETPLTTGIGRVEKVTAGNSTAFVTFGGHRKGRWAFKHASGPSMRGPGH
        MK   FGVFAVM LLAMVFV VD R LRSR ET  T G GRVEKVT G++   V+F GHRKG WAFKHASGPSMRGPGH
Subjt:  MKRGCFGVFAVMILLAMVFVRVDGRPLRSRAETPLTTGIGRVEKVTAGNSTAFVTFGGHRKGRWAFKHASGPSMRGPGH
A0A5A7V0S4 Uncharacterized protein8.7e-4575.97Show/hide
Query:  MNNWPCVCTKSNVPNSVEKDGKRKKLKAETEELGNFPILLLDSFVDSKARMKRGCFGVFAVMILLAMVFVRVDGRPLRSRAETPLTTGIGRVEKVTAGNS
        MNN  CVCTKSNVPNSVE DGKRKKLKA+++ELGNF    LDS VDSKARMK   FGVFAVMILLAMVFV VD R LRSR ET  T G GRVEKVT G++
Subjt:  MNNWPCVCTKSNVPNSVEKDGKRKKLKAETEELGNFPILLLDSFVDSKARMKRGCFGVFAVMILLAMVFVRVDGRPLRSRAETPLTTGIGRVEKVTAGNS

Query:  TAFVTFGGHRKGRWAFKHASGPSMRGPGH
        +  V+F GHRKG WAFKHASGPSMRGPGH
Subjt:  TAFVTFGGHRKGRWAFKHASGPSMRGPGH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAATTGGCCTTGTGTTTGCACCAAGTCAAATGTTCCCAACAGCGTGGAAAAAGATGGGAAAAGAAAGAAATTAAAGGCAGAGACAGAGGAGTTGGGCAAC
TTCCCAATTCTTCTTTTAGACAGTTTTGTAGATTCAAAAGCAAGGATGAAGCGTGGTTGTTTTGGAGTTTTTGCTGTGATGATACTGTTGGCAATGGTGTTTGTT
CGTGTGGATGGCAGACCCCTAAGATCGAGAGCGGAAACTCCGCTCACGACAGGAATTGGACGAGTTGAGAAAGTAACCGCAGGTAACTCGACTGCCTTTGTTACC
TTCGGTGGTCATCGGAAGGGAAGATGGGCATTCAAGCATGCTTCCGGACCGAGCATGAGAGGACCAGGACACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAATTGGCCTTGTGTTTGCACCAAGTCAAATGTTCCCAACAGCGTGGAAAAAGATGGGAAAAGAAAGAAATTAAAGGCAGAGACAGAGGAGTTGGGCAAC
TTCCCAATTCTTCTTTTAGACAGTTTTGTAGATTCAAAAGCAAGGATGAAGCGTGGTTGTTTTGGAGTTTTTGCTGTGATGATACTGTTGGCAATGGTGTTTGTT
CGTGTGGATGGCAGACCCCTAAGATCGAGAGCGGAAACTCCGCTCACGACAGGAATTGGACGAGTTGAGAAAGTAACCGCAGGTAACTCGACTGCCTTTGTTACC
TTCGGTGGTCATCGGAAGGGAAGATGGGCATTCAAGCATGCTTCCGGACCGAGCATGAGAGGACCAGGACACTAG
Protein sequenceShow/hide protein sequence
MNNWPCVCTKSNVPNSVEKDGKRKKLKAETEELGNFPILLLDSFVDSKARMKRGCFGVFAVMILLAMVFVRVDGRPLRSRAETPLTTGIGRVEKVTAGNSTAFVT
FGGHRKGRWAFKHASGPSMRGPGH