CuGenDBv2

Gene ID	ClCG08G016470
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	DNA excision repair protein ERCC-8-like isoform X2
Genome location	CG_Chr08:28828803..28834638
RNA-Seq Expression	ClCG08G016470
Synteny	ClCG08G016470
Gene Ontology terms	GO:0000209 - protein polyubiquitination (biological process) GO:0006283 - transcription-coupled nucleotide-excision repair (biological process) GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process) GO:0000109 - nucleotide-excision repair complex (cellular component) GO:0031464 - Cul4A-RING E3 ubiquitin ligase complex (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001680 - WD40 repeat IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR019775 - WD40 repeat, conserved site IPR020472 - G-protein beta WD-40 repeat IPR036322 - WD40-repeat-containing domain superfamily IPR042238 - DNA excision repair protein Rad28/ERCC8/Ckn1/ATCSA-1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6585706.1 WD repeat-containing protein ATCSA-1, partial [Cucurbita argyrosperma subsp. sororia]

3.2e-252

90.72

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Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
        MWKDIRDREAGKLRPNSFANRVKSDR SSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRA+HSEGLIAK+QC+FAVDKQHEHGH
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH

Query:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS
        +YA+SSAIWYP+DTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSV WSASS
Subjt:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS

Query:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSA-TGKLPAKG
        EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANK          LSTSKS LASQGSNMKSRI HKKLANGNATKPS+ TGKLPAKG
Subjt:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSA-TGKLPAKG

Query:  STRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKT
        STRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYET+RL TNKPLQLATS+DSALVFAPCM  +KAFDMWTGK 
Subjt:  STRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKT

Query:  SLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDC-RRQGSLVSMLMPSIRLCSPCT
        SLT SGHYE VNCC Y+F DQELYTGGNDRQILVWSPSR+STELWTRRIGN +QT ITGATDC  RQG  VS LMPSI+LC PCT
Subjt:  SLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDC-RRQGSLVSMLMPSIRLCSPCT

XP_008444553.1 PREDICTED: DNA excision repair protein ERCC-8-like isoform X1 [Cucumis melo]

1.8e-263

92.84

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Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
        MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH

Query:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS
        +YA+SSAIWYPVDTGLFVTGS+DHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSV WSASS
Subjt:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS

Query:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS
        EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANK          LSTSKSLLASQG NMKSRIPHKKL NGNATKPS+TGKLPAKGS
Subjt:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS

Query:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS
        TRQRLHPGLLS QDR+VSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVN+ETMRLQTNKPLQLATS+DS+LVFAPCMATVKAFDMWTGKTS
Subjt:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS

Query:  LTFSGHYEGVNCCWYNFPD------QELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT
        LT SGHYEGVNCCWYNFPD      QELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQT ITGATDCR+QGSLVSM++P+ RLCSPCT
Subjt:  LTFSGHYEGVNCCWYNFPD------QELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT

XP_008444554.1 PREDICTED: DNA excision repair protein ERCC-8-like isoform X2 [Cucumis melo]

1.9e-265

Show/hide

Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
        MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH

Query:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS
        +YA+SSAIWYPVDTGLFVTGS+DHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSV WSASS
Subjt:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS

Query:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS
        EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANK          LSTSKSLLASQG NMKSRIPHKKL NGNATKPS+TGKLPAKGS
Subjt:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS

Query:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS
        TRQRLHPGLLS QDR+VSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVN+ETMRLQTNKPLQLATS+DS+LVFAPCMATVKAFDMWTGKTS
Subjt:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS

Query:  LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT
        LT SGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQT ITGATDCR+QGSLVSM++P+ RLCSPCT
Subjt:  LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT

XP_011649570.1 WD repeat-containing protein ATCSA-1 isoform X1 [Cucumis sativus]

2.1e-264

93.79

Show/hide

Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
        MWK+IRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH

Query:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS
        +YA+SSAIWYPVDTGLFVTGS+DHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSV WSASS
Subjt:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS

Query:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS
        EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANK          LSTSKSLLASQGSNMKSRIPHKKL NGNATKPS+TGKLPAKGS
Subjt:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS

Query:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS
        TRQRLHPGLLS QDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVN+ET+RLQTNKPLQLATS+DS+LVFAPCMATVKAFDMWTGKTS
Subjt:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS

Query:  LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT
        LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPS+NSTELWTRRIGN+LQT ITGATDCR+QGSLVSM+M + RLCSPCT
Subjt:  LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT

XP_038885499.1 WD repeat-containing protein ATCSA-1 isoform X1 [Benincasa hispida]

2.9e-269

95.24

Show/hide

Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
        MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDI+SPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAK+QCIFAVDKQHEHGH
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH

Query:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS
        +YA+SSAIWYP+DTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSV WSASS
Subjt:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS

Query:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS
        EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANK          LSTSKSLLASQGSNMKSR+PHKKLANGNATKPS+TGKLPAKGS
Subjt:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS

Query:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS
        TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATS+DS+LVFAPCMATVKAFDMWTGKTS
Subjt:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS

Query:  LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT
        LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQT ITGATDCR+QG+LVSMLMPSIRLCSPCT
Subjt:  LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BAM3 DNA excision repair protein ERCC-8-like isoform X1

8.7e-264

92.84

Show/hide

Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
        MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH

Query:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS
        +YA+SSAIWYPVDTGLFVTGS+DHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSV WSASS
Subjt:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS

Query:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS
        EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANK          LSTSKSLLASQG NMKSRIPHKKL NGNATKPS+TGKLPAKGS
Subjt:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS

Query:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS
        TRQRLHPGLLS QDR+VSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVN+ETMRLQTNKPLQLATS+DS+LVFAPCMATVKAFDMWTGKTS
Subjt:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS

Query:  LTFSGHYEGVNCCWYNFPD------QELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT
        LT SGHYEGVNCCWYNFPD      QELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQT ITGATDCR+QGSLVSM++P+ RLCSPCT
Subjt:  LTFSGHYEGVNCCWYNFPD------QELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT

A0A1S3BBB8 DNA excision repair protein ERCC-8-like isoform X2

9.3e-266

Show/hide

Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
        MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH

Query:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS
        +YA+SSAIWYPVDTGLFVTGS+DHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSV WSASS
Subjt:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS

Query:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS
        EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANK          LSTSKSLLASQG NMKSRIPHKKL NGNATKPS+TGKLPAKGS
Subjt:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS

Query:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS
        TRQRLHPGLLS QDR+VSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVN+ETMRLQTNKPLQLATS+DS+LVFAPCMATVKAFDMWTGKTS
Subjt:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS

Query:  LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT
        LT SGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQT ITGATDCR+QGSLVSM++P+ RLCSPCT
Subjt:  LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT

A0A6J1BR73 DNA excision repair protein ERCC-8 isoform X1

3.9e-248

88.84

Show/hide

Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
        MWK+IRDREAGKLRPNSFANR+KSDR S+LQLSNHKDIVSPHRGSVNSLQVDLTE RYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHE GH
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH

Query:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS
        +YA+SSAIWYP+DTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSV WSASS
Subjt:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS

Query:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS
        EWVL+TGGCDGAIRFWDIRRAGCFRVLDQ QSQLGRRPPIS              ++LSTSKSL ASQGSNMKSR+PHKKLANGNATKPS+ GKLPAKGS
Subjt:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS

Query:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS
        TRQRLHPGL SSQDR+++H+GAV+GLKVT DGMYLLSAGSDSRL+LWDVESGCNTLVNYET RLQ NKPLQLATS+DSALVFAPCM TVKAFDMWTGKTS
Subjt:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS

Query:  LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQ-GSLVSMLMPSIRLCSPCT
        LTFSGHYEGVNCCWY+F DQELYTGGNDRQILVWSPSRNSTELWTRRIGN  QT ITGATD RRQ GS VSMLMPS++LCSPCT
Subjt:  LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQ-GSLVSMLMPSIRLCSPCT

A0A6J1GHI5 DNA excision repair protein ERCC-8-like isoform X1

6.5e-251

90.31

Show/hide

Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
        MWKDIRDREAGKLRPNSFANRVKSDR SSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRA+HSEGLIAK+QC+FAVDKQHEHGH
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH

Query:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS
        +YA+SSAIWYP+DTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSV WSASS
Subjt:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS

Query:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSA-TGKLPAKG
        EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANK          LSTSKS LASQ SNMKSRI HKKL+NGNATKPS+ TGKLPAKG
Subjt:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSA-TGKLPAKG

Query:  STRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKT
        STRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYET+RL TNKPLQLATS+DSALVFAPCMA +KAFDMWTGK 
Subjt:  STRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKT

Query:  SLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDC-RRQGSLVSMLMPSIRLCSPCT
        SLT SGHYE VNCC Y+F DQELYTGGNDRQILVWSPSR+STELWTRRIGN +QT ITGATDC   QG  VS LMPSI+LC PCT
Subjt:  SLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDC-RRQGSLVSMLMPSIRLCSPCT

A0A6J1KK17 DNA excision repair protein ERCC-8-like isoform X1

1.4e-250

90.53

Show/hide

Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
        MWKDIRDREAGKLRPNSFANRVKSDR SSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRA+HSEGLIAK+QC+FAVDKQHEHGH
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH

Query:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS
        +YA+SSAIWYP+DTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSV WSASS
Subjt:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS

Query:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLA-NGNATKPSA-TGKLPAK
        EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANK          LSTSKS LASQGSNMKSRI HKKLA NGNATKPS+ TGKLPAK
Subjt:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLA-NGNATKPSA-TGKLPAK

Query:  GSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGK
        GSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYET+RL TNKPLQLATS+DSALVFAPCMA +KAFDMWTGK
Subjt:  GSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGK

Query:  TSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDC-RRQGSLVSMLMPSIRLCSPCT
         SLT SGHYE VNCC Y+F DQELYTGGNDRQILVWSPSR+STELWTRRIGN +QT ITGATDC   QG  VS LMPSI+LC PCT
Subjt:  TSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDC-RRQGSLVSMLMPSIRLCSPCT

SwissProt top hits

e value

%identity

Alignment

Q13216 DNA excision repair protein ERCC-8

1.0e-59

30.72

Show/hide

Query:  REAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHQYAVSSA
        R+ G   P        + R   L+L+  +D+   H G +N+L ++  EGRY+LSG SD    ++D++ ++       K  C  ++ + H   H+Y+V + 
Subjt:  REAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHQYAVSSA

Query:  IWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASSEWVLITG
         WYP DTG+F + S+D  + VWDTNT Q    F     VY   MS ++T H L+A GT   +V+LCD+ SG+ SH L GHR  +++V+WS   +++L T 
Subjt:  IWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASSEWVLITG

Query:  GCDGAIRFWDIRRA-GCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGSTRQRLH
          D  ++ WD+RRA GC   LDQ                                                       N  K  A               
Subjt:  GCDGAIRFWDIRRA-GCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGSTRQRLH

Query:  PGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATS--EDSALVFAPCMATVKAFDMWTGKTSLTFS
              +    +H G V GL  T DG++LL+ G+D+R++LW+  +G NTLVNY  +   + K L+   S    S  VF P  +T+  + +++G+      
Subjt:  PGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATS--EDSALVFAPCMATVKAFDMWTGKTSLTFS

Query:  GHYEGVNCCWYNFPDQELYTGGNDRQILVWSPS
        GHY+ V+CC +    QELY+G  D  IL W PS
Subjt:  GHYEGVNCCWYNFPDQELYTGGNDRQILVWSPS

Q5BIM8 DNA excision repair protein ERCC-8

4.1e-61

31.64

Show/hide

Query:  REAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHQYAVSSA
        R+AG   P        + R   L+L+  +D+   H   VN+L ++  EGRY+LSG SD    ++D++ ++       K  C  +V + H   H+Y+V + 
Subjt:  REAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHQYAVSSA

Query:  IWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASSEWVLITG
         WYP DTG+F + S+D  + VWDTNT Q+   F     VY   MS +AT H L+A GT   +V+LCD+ SG+ SH L GHR  +++V+WS   E++L T 
Subjt:  IWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASSEWVLITG

Query:  GCDGAIRFWDIRRA-GCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGSTRQRLH
          D   + WD+RRA GC   LDQ                                K   A++ +N                                   
Subjt:  GCDGAIRFWDIRRA-GCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGSTRQRLH

Query:  PGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSE--DSALVFAPCMATVKAFDMWTGKTSLTFS
                   +H G V GL  T DG++LL+ G+D+R++LW+  +G NTLVNY  +   + K L+   S    S  VF P  +T+  + +++G+      
Subjt:  PGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSE--DSALVFAPCMATVKAFDMWTGKTSLTFS

Query:  GHYEGVNCCWYNFPDQELYTGGNDRQILVWSPS
        GHY+ V+CC +    QELY+G  D  IL W PS
Subjt:  GHYEGVNCCWYNFPDQELYTGGNDRQILVWSPS

Q8CFD5 DNA excision repair protein ERCC-8

1.6e-60

31.94

Show/hide

Query:  REAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHQYAVSSA
        R++G   P        + R   L+L+  +D+   H   VN+L ++  EGRY+LSG SD    ++D++ A+       K  C  +V + H   H+Y+V + 
Subjt:  REAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHQYAVSSA

Query:  IWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASSEWVLITG
         WYP DTG+F + S+D  + VWDTNT Q    F     VY   MS  AT H L+A GT   +V+LCD+ SG+ SH L GHR  +++V+WS   +++L T 
Subjt:  IWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASSEWVLITG

Query:  GCDGAIRFWDIRRA-GCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGSTRQRLH
          D  ++ WD+RRA GC   LDQ                                K   A++ +N                                   
Subjt:  GCDGAIRFWDIRRA-GCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGSTRQRLH

Query:  PGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATS--EDSALVFAPCMATVKAFDMWTGKTSLTFS
                   +H G V GL  T DG++LL+ G+D+R++LW+  SG NTLVNY  +   + K LQ A S    S  VF P  +T+  + + +G+      
Subjt:  PGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATS--EDSALVFAPCMATVKAFDMWTGKTSLTFS

Query:  GHYEGVNCCWYNFPDQELYTGGNDRQILVWSP
        GHY+ V+CC +    QELY+G  D  IL W P
Subjt:  GHYEGVNCCWYNFPDQELYTGGNDRQILVWSP

Q93ZG3 WD repeat-containing protein ATCSA-1

4.3e-175

69.86

Show/hide

Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSE--GLIAKHQCIFAVDKQHEH
        MW+ I+DRE G++R NSFANR KS R  SLQLSN KD VSPHRGSVNSLQVDLTEGRYLLSGA+D SAAVFD+QRAT  E  GLIAKH+CIF VDKQHE+
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSE--GLIAKHQCIFAVDKQHEH

Query:  GHQYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSA
        GH+YA+SSAIWYP+DTGLF+TGS+DH++ VWDTNT Q VV+FK+PGKVYRTAMSS+A SH LIAAGTEDVQVRLCDI+SGAFSHTLSGHRDGVMSV WS 
Subjt:  GHQYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSA

Query:  SSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAK
        SSEWVL TGGCDGAIRFWDIRRAGCFRVLDQSQ+QLG RPPI       + R  V     S +KS L  Q    + +    K     + K S++ K   +
Subjt:  SSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAK

Query:  GSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGK
         S ++R+HPG+LS+ DRA +HYGAVTGLK T DGMYLLSAGSDSR++LWD+ESG NTLVN+ET R+QTNK +QL TS+D ALVF PCM TVKAF MW+G+
Subjt:  GSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGK

Query:  TSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP
        T+L   GHYE VN C +N  DQELYT G+DRQILVWSP
Subjt:  TSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP

Q9USR0 DNA excision repair protein ckn1

4.0e-40

27.6

Show/hide

Query:  REAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPH----RGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHQYA
        RE G+   +SF  ++   R   L L+    I   H     GSVN+L +D T  + ++SG +++S  V+D+Q     E        + AV  +    H++ 
Subjt:  REAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPH----RGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHQYA

Query:  VSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASSEWV
        ++   W+P D G+F + S+DH + VWD +T Q    F +   +Y  A S +A SH LIA       +RLCD+ SG+++H+LSGH   V++V W   +E+V
Subjt:  VSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASSEWV

Query:  LITGGCDGAIRFWDIRR-AGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGSTR
        L +G  DG  R WDIR+ +  F  +D                                                                          
Subjt:  LITGGCDGAIRFWDIRR-AGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGSTR

Query:  QRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNY-ETMRLQTNK----PLQLATSEDS--ALVFAPCMATVKAFDMW
          LH   L S    +SHYG V GL  T D  YL S G+D R+++W++ESG NTL  +   +  QT      P  +  S DS   ++F     ++   ++ 
Subjt:  QRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNY-ETMRLQTNK----PLQLATSEDS--ALVFAPCMATVKAFDMW

Query:  TGKTSLTFSGH-YEGVNCCWYNFPDQELYTGGNDRQILVWSP
         G      S H  + +NC  Y    ++ +TG  +  I +WSP
Subjt:  TGKTSLTFSGH-YEGVNCCWYNFPDQELYTGGNDRQILVWSP

Arabidopsis top hits

e value

%identity

Alignment

AT1G19750.1 Transducin/WD40 repeat-like superfamily protein

5.6e-170

67.58

Show/hide

Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSE--GLIAKHQCIFAVDKQHEH
        MWK  +DRE G+ R NSFANR KS R  SLQLSN KD VSPHRGSVNSLQVDLTEGRYLLSGA+D SAAVFD++RAT  E  GLIAKH+CIF V KQHE+
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSE--GLIAKHQCIFAVDKQHEH

Query:  GHQYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSA
        GH+YA+SSAIWYP+DTG+F+TGS+DH++ VWDTNT+QVVV+FK+PGKVYRTAMSS+A SH LIAAGT+DVQVRLCDI+SGAFSHTLSGHRDGVMSV WS 
Subjt:  GHQYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSA

Query:  SSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAK
        SSEWVL TGGCDGAIRFWDIRRAGCFRVLD SQ+QLG RPPI       + R  V+    S +KS L  Q      +  H       + K S++ K   +
Subjt:  SSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAK

Query:  GSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGK
         S ++R+HPG+LS+ DRA +HYG VTGLK T DGMYLLSAGS SR++LWD+ESG NTLVN+ET R+QT++ +QL TS+D ALVF PCM TVK F MW+G+
Subjt:  GSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGK

Query:  TSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP
        T+L   GHYE VN C +N  DQELYT G DRQI+VWSP
Subjt:  TSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP

AT1G27840.1 Transducin/WD40 repeat-like superfamily protein

3.0e-176

69.86

Show/hide

Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSE--GLIAKHQCIFAVDKQHEH
        MW+ I+DRE G++R NSFANR KS R  SLQLSN KD VSPHRGSVNSLQVDLTEGRYLLSGA+D SAAVFD+QRAT  E  GLIAKH+CIF VDKQHE+
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSE--GLIAKHQCIFAVDKQHEH

Query:  GHQYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSA
        GH+YA+SSAIWYP+DTGLF+TGS+DH++ VWDTNT Q VV+FK+PGKVYRTAMSS+A SH LIAAGTEDVQVRLCDI+SGAFSHTLSGHRDGVMSV WS 
Subjt:  GHQYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSA

Query:  SSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAK
        SSEWVL TGGCDGAIRFWDIRRAGCFRVLDQSQ+QLG RPPI       + R  V     S +KS L  Q    + +    K     + K S++ K   +
Subjt:  SSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAK

Query:  GSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGK
         S ++R+HPG+LS+ DRA +HYGAVTGLK T DGMYLLSAGSDSR++LWD+ESG NTLVN+ET R+QTNK +QL TS+D ALVF PCM TVKAF MW+G+
Subjt:  GSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGK

Query:  TSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP
        T+L   GHYE VN C +N  DQELYT G+DRQILVWSP
Subjt:  TSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP

AT1G27840.2 Transducin/WD40 repeat-like superfamily protein

1.7e-139

60.32

Show/hide

Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH
        MW+ I+DRE G++R NSFANR KS R  SLQLSN KD VSPHRGSVNSLQVDLTEGRYLLSGA+D SAAVFD+QRAT  E                    
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGH

Query:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS
                                            VV+FK+PGKVYRTAMSS+A SH LIAAGTEDVQVRLCDI+SGAFSHTLSGHRDGVMSV WS SS
Subjt:  QYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASS

Query:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS
        EWVL TGGCDGAIRFWDIRRAGCFRVLDQSQ+QLG RPPI       + R  V     S +KS L  Q    + +    K     + K S++ K   + S
Subjt:  EWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAKGS

Query:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS
         ++R+HPG+LS+ DRA +HYGAVTGLK T DGMYLLSAGSDSR++LWD+ESG NTLVN+ET R+QTNK +QL TS+D ALVF PCM TVKAF MW+G+T+
Subjt:  TRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVKAFDMWTGKTS

Query:  LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP
        L   GHYE VN C +N  DQELYT G+DRQILVWSP
Subjt:  LTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP

AT1G27840.3 Transducin/WD40 repeat-like superfamily protein

7.5e-175

69.7

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Query:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSE--GLIAKHQCIFAVDKQHEH
        MW+ I+DRE G++R NSFANR KS R  SLQLSN KD VSPHRGSVNSLQVDLTEGRYLLSGA+D SAAVFD+QRAT  E  GLIAKH+CIF VDKQHE+
Subjt:  MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSE--GLIAKHQCIFAVDKQHEH

Query:  GHQYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSA
        GH+YA+SSAIWYP+DTGLF+TGS+DH++ VWDTNT Q VV+FK+PGKVYRTAMSS+A SH LIAAGTEDVQVRLCDI+SGAFSHTLSGHRDGVMSV WS 
Subjt:  GHQYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSA

Query:  SSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAK
        SSEWVL TGGCDGAIRFWDIRRAGCFRVLDQSQ+QLG RPPI       + R  V     S +KS L  Q    + +    K     + K S++ K   +
Subjt:  SSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSATGKLPAK

Query:  GSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVK-AFDMWTG
         S ++R+HPG+LS+ DRA +HYGAVTGLK T DGMYLLSAGSDSR++LWD+ESG NTLVN+ET R+QTNK +QL TS+D ALVF PCM TVK AF MW+G
Subjt:  GSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVFAPCMATVK-AFDMWTG

Query:  KTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP
        +T+L   GHYE VN C +N  DQELYT G+DRQILVWSP
Subjt:  KTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP

AT5G50230.1 Transducin/WD40 repeat-like superfamily protein

1.3e-09

23.26

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Query:  HGHQYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWS
        H H+    S + +  ++G   TG  D  + +WDTN+  ++ +  L G +      ++   +  + A T    + + D+SSG   HTL+GH D V +V  S
Subjt:  HGHQYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWS

Query:  ASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINR-FHVTLSQLSTSKSLLASQGSNMKSRIPHKKLA-NGNATKPSATGKL
          S   +++   D  I+ WD+ +  C   +  + +       I G T    +   ++ L  + T K  L S+ +   S +    L+ NGN    S    +
Subjt:  ASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINR-FHVTLSQLSTSKSLLASQGSNMKSRIPHKKLA-NGNATKPSATGKL

Query:  PAKGSTRQRLHPGLL-SSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESG
             TR     G L +S +R  S++       ++ D  Y+ +  +D  + +W +  G
Subjt:  PAKGSTRQRLHPGLL-SSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESG

Sequences

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CDS sequence

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GTTGGGCCAAACCGTCTCCGCAGTTTGGATCTGGTAGCCCAATCACACGGAAGCCCAGAGCGACCATCTTTCTTCTCACCGAAGAATCAAGTGGGGAAGATACTGTTGCA
GAAAATAGATAGAGACAGAGAGGAAGATACAGCGTTTTTGCATGAGGGCAAAGATGCTTGGAGAATGTGGAAGGATATTAGAGATAGAGAAGCGGGAAAACTCCGCCCAA
ATTCTTTCGCAAATCGTGTTAAATCCGATCGAACCAGCTCTTTGCAACTTTCCAATCACAAGGACATTGTCTCTCCCCATAGAGGTTCCGTCAACTCACTTCAGGTTGAT
TTGACAGAGGGGAGATATTTGTTGTCTGGAGCATCAGATGCATCAGCTGCTGTTTTTGATATTCAACGTGCAACTCACTCCGAGGGTCTTATTGCAAAGCACCAATGCAT
TTTTGCAGTTGATAAGCAGCATGAACATGGACATCAATATGCAGTATCCTCAGCCATATGGTATCCCGTTGATACTGGATTGTTTGTCACTGGCTCATATGATCATCACA
TTAATGTCTGGGATACAAATACAACTCAGGTGGTGGTGAATTTTAAATTGCCTGGAAAAGTTTATAGGACAGCCATGTCCTCTTTGGCAACATCACACATGCTGATTGCT
GCTGGAACAGAAGATGTTCAAGTTCGCCTTTGTGATATTTCTTCTGGAGCATTTTCTCACACATTATCTGGACATCGTGATGGTGTAATGAGTGTAGCATGGTCAGCTTC
TAGCGAGTGGGTTTTGATTACTGGAGGATGTGATGGAGCTATACGCTTTTGGGACATCAGACGAGCTGGATGCTTTCGTGTTCTAGATCAGTCTCAATCTCAGCTTGGGA
GACGTCCCCCTATTTCAGGATGGACTGCAAATAAGATTAACAGATTTCATGTTACCCTTTCTCAGCTCTCAACATCTAAGTCCCTCTTGGCCAGCCAAGGTTCAAATATG
AAATCTCGCATACCTCATAAGAAACTAGCCAATGGAAATGCAACAAAGCCATCAGCCACAGGTAAACTGCCGGCTAAGGGATCCACAAGGCAGAGGCTACACCCAGGGCT
TTTGTCCAGTCAGGATCGAGCAGTTTCTCACTATGGTGCTGTCACTGGATTAAAAGTAACTGGAGATGGCATGTACCTTCTCAGTGCAGGTTCTGATTCAAGGTTAAAGT
TATGGGACGTTGAATCCGGGTGCAATACACTCGTGAATTATGAAACCATGCGGTTACAGACCAATAAACCATTGCAATTAGCCACATCTGAGGATTCAGCCCTTGTATTT
GCCCCATGCATGGCGACTGTTAAAGCATTTGATATGTGGACAGGGAAGACATCCCTGACATTCAGCGGCCACTATGAAGGTGTGAACTGTTGCTGGTATAATTTCCCAGA
TCAGGAACTGTACACCGGTGGCAATGATAGGCAAATTCTCGTCTGGTCACCATCCCGAAACTCTACCGAACTGTGGACTCGCAGGATTGGGAATCGACTGCAGACAGGGA
TAACTGGAGCGACTGACTGTCGTCGACAAGGAAGTTTGGTTTCAATGCTGATGCCATCCATCAGACTCTGCTCACCATGTACATAA

mRNA sequence

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Protein sequence

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VGPNRLRSLDLVAQSHGSPERPSFFSPKNQVGKILLQKIDRDREEDTAFLHEGKDAWRMWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVD
LTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHQYAVSSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIA
AGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVAWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKINRFHVTLSQLSTSKSLLASQGSNM
KSRIPHKKLANGNATKPSATGKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATSEDSALVF
APCMATVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELWTRRIGNRLQTGITGATDCRRQGSLVSMLMPSIRLCSPCT

ClCG08G016470 (gene) of Watermelon (Charleston Gray) v2.5 genome