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ClCG08G016510 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G016510
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionSmall VCP/p97-interacting protein
Genome locationCG_Chr08:28848734..28850588
RNA-Seq ExpressionClCG08G016510
SyntenyClCG08G016510
Gene Ontology termsNA
InterPro domainsIPR031632 - Small VCP/p97-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020610.1 hypothetical protein SDJN02_17296 [Cucurbita argyrosperma subsp. argyrosperma]9.1e-2493.15Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCVSCLDE +KQQRKEEERLASVEAR+KAAEAAQRRQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK

KAG7029301.1 hypothetical protein SDJN02_07639, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2860.42Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKL---KCNQIS-ARYVYHCEISKVYLIP
        MGQC SCLDEG++Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK     C+ +S A +    E  K+  + 
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKL---KCNQIS-ARYVYHCEISKVYLIP

Query:  VLIKGKDRIFISIPGLCLCQATCLYSQLPSLPKAEVIEWNCSLV
         ++               C    +Y+  P  PKAEVIEWN SL+
Subjt:  VLIKGKDRIFISIPGLCLCQATCLYSQLPSLPKAEVIEWNCSLV

XP_008444542.1 PREDICTED: uncharacterized protein LOC103487833 [Cucumis melo]9.7e-2698.63Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCVSCLDEG+KQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK

XP_022962383.1 uncharacterized protein LOC111462843 [Cucurbita moschata]4.1e-2493.15Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQC SCLDEG++Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK

XP_038886006.1 uncharacterized protein LOC120076314 [Benincasa hispida]4.4e-26100Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK

TrEMBL top hitse value%identityAlignment
A0A0A0LN85 Uncharacterized protein2.0e-2494.59Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKL
        MGQCVSCLD G+KQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSA  NKGEPVLKL
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKL

A0A1S3BAJ0 uncharacterized protein LOC1034878334.7e-2698.63Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCVSCLDEG+KQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK

A0A6J1HEN1 uncharacterized protein LOC1114628432.0e-2493.15Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQC SCLDEG++Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK

A0A6J1K846 uncharacterized protein LOC1114920132.0e-2493.15Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQC SCLDEG++Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK

A0A6J1KLT2 uncharacterized protein LOC1114964244.4e-2493.15Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCVSCLDE +KQQRKEEERLASVEAR+KAAEAAQRRQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63905.1 unknown protein6.5e-2078.57Show/hide
Query:  CVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        C SC D  +K+QRKEEER AS EARAKAAEAAQRR+E+F+KSAAGRAA+AQL   AKQSANTNKGEPVLK
Subjt:  CVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAATGCGTAAGTTGTCTAGACGAAGGCGAAAAGCAACAGAGAAAAGAGGAAGAAAGATTAGCTTCCGTCGAAGCTCGCGCCAAAGCTGCTGAAGCTGCTCAGAG
AAGGCAAGAAGAATTTGAAAAATCTGCTGCAGGAAGGGCCGCACGTGCTCAGTTGGCAGCAAATGCAAAGCAATCTGCCAACACTAACAAGGGAGAACCAGTTCTAAAGC
TAAAGTGTAATCAGATTTCTGCACGTTATGTTTATCACTGTGAGATTAGTAAAGTTTACCTGATTCCAGTGTTAATAAAAGGAAAAGATCGTATATTTATCAGCATTCCT
GGGCTCTGCTTGTGCCAAGCAACTTGTCTATACTCCCAACTCCCAAGTCTCCCAAAGGCAGAAGTTATTGAATGGAACTGCAGTCTTGTATTTGTTATTCATGAATCAAC
GAAACAATAA
mRNA sequenceShow/hide mRNA sequence
AATTGGGAGATCTTGGGAAAAAACCTGCAACCGCAAGCAAAGCGATGGGGCAATGCGTAAGTTGTCTAGACGAAGGCGAAAAGCAACAGAGAAAAGAGGAAGAAAGATTA
GCTTCCGTCGAAGCTCGCGCCAAAGCTGCTGAAGCTGCTCAGAGAAGGCAAGAAGAATTTGAAAAATCTGCTGCAGGAAGGGCCGCACGTGCTCAGTTGGCAGCAAATGC
AAAGCAATCTGCCAACACTAACAAGGGAGAACCAGTTCTAAAGCTAAAGTGTAATCAGATTTCTGCACGTTATGTTTATCACTGTGAGATTAGTAAAGTTTACCTGATTC
CAGTGTTAATAAAAGGAAAAGATCGTATATTTATCAGCATTCCTGGGCTCTGCTTGTGCCAAGCAACTTGTCTATACTCCCAACTCCCAAGTCTCCCAAAGGCAGAAGTT
ATTGAATGGAACTGCAGTCTTGTATTTGTTATTCATGAATCAACGAAACAATAA
Protein sequenceShow/hide protein sequence
MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKLKCNQISARYVYHCEISKVYLIPVLIKGKDRIFISIP
GLCLCQATCLYSQLPSLPKAEVIEWNCSLVFVIHESTKQ