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ClCG08G016560 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G016560
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr08:28862613..28863798
RNA-Seq ExpressionClCG08G016560
SyntenyClCG08G016560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT79752.1 hypothetical protein VIGAN_02267900, partial [Vigna angularis var. angularis]1.8e-2857.04Show/hide
Query:  SFGTDPSFGGGNPSELPSIWRPKSQKTLLDACTSSFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAIL
        SFGT+PS GGG PS LPSIW   S KTLL+A   SFS+S  RV +S P SP    +   LSFS +SN S SLKSF GS +L A PSP RK T  ILS IL
Subjt:  SFGTDPSFGGGNPSELPSIWRPKSQKTLLDACTSSFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAIL

Query:  TKHSGHISPSMIEPKTWLQSFFSETNTLVAATLKC
         KHSG   PSM  P+T+ QS FSE  T +  T KC
Subjt:  TKHSGHISPSMIEPKTWLQSFFSETNTLVAATLKC

PON72967.1 hypothetical protein PanWU01x14_061170 [Parasponia andersonii]3.0e-3168.6Show/hide
Query:  SFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLK
        SF SSL R ++S P SP   SENS LSFS E NMSKSLKSF GSL+LL TPSPNRK T MILSAI TKHSGH SPS+  P+TWLQSFFS+T+T+  A+ K
Subjt:  SFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLK

Query:  CSIQREIAVSSFSHSILSISS
        C I R IAVS  SH I SISS
Subjt:  CSIQREIAVSSFSHSILSISS

PON91135.1 hypothetical protein TorRG33x02_131660 [Trema orientale]1.0e-3169.42Show/hide
Query:  SFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLK
        SF SSL R ++S P SP   SENS LSFS E NMSKSLKSF GSL+LL TPSPNRK T MILSAI TKHSG  SPSM  P+TWLQSFFS+T+T+  A+ K
Subjt:  SFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLK

Query:  CSIQREIAVSSFSHSILSISS
        C I R IAVS  SHSI SISS
Subjt:  CSIQREIAVSSFSHSILSISS

XP_020244538.1 uncharacterized protein LOC109822714 isoform X1 [Asparagus officinalis]4.2e-1765.22Show/hide
Query:  MESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLKCSIQREIAVSSFSHSILSISS
        MES MS+SLKSF GSL L ATPSP RKKT MILSAI  KH+G I PSM+  +T LQ  FS   T   A+ KC IQR IA S  SHSILSISS
Subjt:  MESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLKCSIQREIAVSSFSHSILSISS

XP_020244546.1 uncharacterized protein LOC109822714 isoform X2 [Asparagus officinalis]3.2e-1761.86Show/hide
Query:  MESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLKCSIQREIAVSSFSHSILSISSGVYVL
        MES MS+SLKSF GSL L ATPSP RKKT MILSAI  KH+G I PSM+  +T LQ  FS   T   A+ KC IQR IA S  SHSILSISS +  +
Subjt:  MESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLKCSIQREIAVSSFSHSILSISSGVYVL

TrEMBL top hitse value%identityAlignment
A0A0S3RGG8 Uncharacterized protein (Fragment)8.9e-2957.04Show/hide
Query:  SFGTDPSFGGGNPSELPSIWRPKSQKTLLDACTSSFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAIL
        SFGT+PS GGG PS LPSIW   S KTLL+A   SFS+S  RV +S P SP    +   LSFS +SN S SLKSF GS +L A PSP RK T  ILS IL
Subjt:  SFGTDPSFGGGNPSELPSIWRPKSQKTLLDACTSSFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAIL

Query:  TKHSGHISPSMIEPKTWLQSFFSETNTLVAATLKC
         KHSG   PSM  P+T+ QS FSE  T +  T KC
Subjt:  TKHSGHISPSMIEPKTWLQSFFSETNTLVAATLKC

A0A2P5DI24 Uncharacterized protein1.5e-3168.6Show/hide
Query:  SFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLK
        SF SSL R ++S P SP   SENS LSFS E NMSKSLKSF GSL+LL TPSPNRK T MILSAI TKHSGH SPS+  P+TWLQSFFS+T+T+  A+ K
Subjt:  SFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLK

Query:  CSIQREIAVSSFSHSILSISS
        C I R IAVS  SH I SISS
Subjt:  CSIQREIAVSSFSHSILSISS

A0A2P5F043 Uncharacterized protein5.0e-3269.42Show/hide
Query:  SFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLK
        SF SSL R ++S P SP   SENS LSFS E NMSKSLKSF GSL+LL TPSPNRK T MILSAI TKHSG  SPSM  P+TWLQSFFS+T+T+  A+ K
Subjt:  SFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLK

Query:  CSIQREIAVSSFSHSILSISS
        C I R IAVS  SHSI SISS
Subjt:  CSIQREIAVSSFSHSILSISS

A0A5P1FPR5 Uncharacterized protein2.1e-1765.22Show/hide
Query:  MESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLKCSIQREIAVSSFSHSILSISS
        MES MS+SLKSF GSL L ATPSP RKKT MILSAI  KH+G I PSM+  +T LQ  FS   T   A+ KC IQR IA S  SHSILSISS
Subjt:  MESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHISPSMIEPKTWLQSFFSETNTLVAATLKCSIQREIAVSSFSHSILSISS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGTCTCAAGGCCCACATAATATTTCCCAATCCCCGGCAACAAAGCCGAGTGCAAATTGAAAAACTCCGTGTAAGCCGGGAGTATAATCTTCAGAGTTGCCTCTT
TCAACTGCTCCCGCAAATCCAAATCTGGAATGCAATACGTCGCTCTATAGCCTTAACGAATGTTTCCATTTTTGTTTTCGCTAAATCTTCCACGGTTTCCGTGTTCTGTA
ATCGCATGTCTTCCATGTCCATTACCGAAAGCAGAGGCTCCCAACATAGCATTTGGGCTTCCATTACGTTGGAGAAGGCGTCTTTGAGCAAATTCTCCTCTTTGACGGCG
TATCGGACTAGTTTTGGAACCGATCCGTCTTTTGGAGGAGGAAATCCATCTGAATTGCCTTCAATTTGGAGGCCGAAGTCCCAAAAGACTTTACTGGACGCGTGCACGAG
TAGCTTCTCGAGCTCTCTGTATCGTGTACGGATTTCGGTGCCGGCTTCGCCGCCAAATGCCTCTGAGAATTCGGAGTTGAGTTTTTCCATGGAGTCGAACATGTCCAAGA
GTTTGAAGAGTTTCTGCGGCTCTTTGGTGCTTCTGGCGACGCCTTCCCCAAACCGGAAGAAGACGGTCATGATTTTGTCTGCAATCTTGACGAAGCATTCAGGCCACATC
AGTCCATCCATGATTGAGCCTAAAACCTGGTTACAGAGTTTCTTCTCGGAAACTAATACGCTCGTGGCTGCGACCTTGAAATGTTCAATCCAGAGAGAAATTGCTGTCTC
CAGTTTTTCCCACTCCATTTTGTCAATTTCTTCTGGAGTGTACGTTTTGAGATATACTGGATTGAGCCGCATCAATGCTGAAGCTGCCCTTCTGTATCTAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCGTCTCAAGGCCCACATAATATTTCCCAATCCCCGGCAACAAAGCCGAGTGCAAATTGAAAAACTCCGTGTAAGCCGGGAGTATAATCTTCAGAGTTGCCTCTT
TCAACTGCTCCCGCAAATCCAAATCTGGAATGCAATACGTCGCTCTATAGCCTTAACGAATGTTTCCATTTTTGTTTTCGCTAAATCTTCCACGGTTTCCGTGTTCTGTA
ATCGCATGTCTTCCATGTCCATTACCGAAAGCAGAGGCTCCCAACATAGCATTTGGGCTTCCATTACGTTGGAGAAGGCGTCTTTGAGCAAATTCTCCTCTTTGACGGCG
TATCGGACTAGTTTTGGAACCGATCCGTCTTTTGGAGGAGGAAATCCATCTGAATTGCCTTCAATTTGGAGGCCGAAGTCCCAAAAGACTTTACTGGACGCGTGCACGAG
TAGCTTCTCGAGCTCTCTGTATCGTGTACGGATTTCGGTGCCGGCTTCGCCGCCAAATGCCTCTGAGAATTCGGAGTTGAGTTTTTCCATGGAGTCGAACATGTCCAAGA
GTTTGAAGAGTTTCTGCGGCTCTTTGGTGCTTCTGGCGACGCCTTCCCCAAACCGGAAGAAGACGGTCATGATTTTGTCTGCAATCTTGACGAAGCATTCAGGCCACATC
AGTCCATCCATGATTGAGCCTAAAACCTGGTTACAGAGTTTCTTCTCGGAAACTAATACGCTCGTGGCTGCGACCTTGAAATGTTCAATCCAGAGAGAAATTGCTGTCTC
CAGTTTTTCCCACTCCATTTTGTCAATTTCTTCTGGAGTGTACGTTTTGAGATATACTGGATTGAGCCGCATCAATGCTGAAGCTGCCCTTCTGTATCTAACCTGA
Protein sequenceShow/hide protein sequence
MDRLKAHIIFPNPRQQSRVQIEKLRVSREYNLQSCLFQLLPQIQIWNAIRRSIALTNVSIFVFAKSSTVSVFCNRMSSMSITESRGSQHSIWASITLEKASLSKFSSLTA
YRTSFGTDPSFGGGNPSELPSIWRPKSQKTLLDACTSSFSSSLYRVRISVPASPPNASENSELSFSMESNMSKSLKSFCGSLVLLATPSPNRKKTVMILSAILTKHSGHI
SPSMIEPKTWLQSFFSETNTLVAATLKCSIQREIAVSSFSHSILSISSGVYVLRYTGLSRINAEAALLYLT