; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG08G017930 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G017930
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRNA-binding protein 48
Genome locationCG_Chr08:29961756..29972943
RNA-Seq ExpressionClCG08G017930
SyntenyClCG08G017930
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR020101 - Cytochrome b-c1 complex subunit 8, plants
IPR035979 - RNA-binding domain superfamily
IPR036642 - Cytochrome b-c1 complex subunit 8 superfamily
IPR039599 - RNA-binding protein 48


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142975.1 RNA-binding protein 48 isoform X2 [Cucumis sativus]1.6e-10284.68Show/hide
Query:  LDNRKSEIGNRKSEIGS-------RRRRL-VRGCLALQTSPLRYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFA
        LDN K EIG+R  E          R   L VR       S  RYLIVRNVPALGCGDDL KLFSSYGNLEEC PMDAEECDEFTDVYFVKFHLVTNARFA
Subjt:  LDNRKSEIGNRKSEIGS-------RRRRL-VRGCLALQTSPLRYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFA

Query:  KRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSS
        KRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRG+ VSSTTAKL + S SHYTL QKNSLEKRNYGDAALISNPHVS+ITRVSS
Subjt:  KRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSS

Query:  DQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
        DQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
Subjt:  DQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI

XP_008444339.1 PREDICTED: RNA-binding protein 48 isoform X1 [Cucumis melo]3.8e-9992.23Show/hide
Query:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGD L KLFSSYGNLEEC PMDAEECDEFTDVYFVKFH VTNARFAKRKLDEFVFLGNRLQVSYAPEFESL+DTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM
        LDSGRPRGS VSSTTAKL +PS S+YTL QKNSLE RNYGDAALIS+PHVS++TRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSR+
Subjt:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

XP_011649485.1 RNA-binding protein 48 isoform X1 [Cucumis sativus]4.0e-10184.34Show/hide
Query:  LDNRKSEIGNRKSEIGS-------RRRRL-VRGCLALQTSPLRYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFA
        LDN K EIG+R  E          R   L VR       S  RYLIVRNVPALGCGDDL KLFSSYGNLEEC PMDAEECDEFTDVYFVKFHLVTNARFA
Subjt:  LDNRKSEIGNRKSEIGS-------RRRRL-VRGCLALQTSPLRYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFA

Query:  KRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEK-RNYGDAALISNPHVSEITRVS
        KRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRG+ VSSTTAKL + S SHYTL QKNSLEK RNYGDAALISNPHVS+ITRVS
Subjt:  KRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEK-RNYGDAALISNPHVSEITRVS

Query:  SDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
        SDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
Subjt:  SDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI

XP_022997621.1 RNA-binding protein 48 isoform X1 [Cucurbita maxima]2.2e-9990.78Show/hide
Query:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGD+LLKLFSSYGNLEEC PMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM
        LDSGRPRGS V+S T K  +PSHSHYTL QKNSLEKRNYGDAAL SNPHVS+ITRVSSDQDYFASESMNQTVHLVREKLDKIQS SEHL+AGP SK+SR+
Subjt:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

XP_038884635.1 RNA-binding protein 48 isoform X1 [Benincasa hispida]5.2e-10193.2Show/hide
Query:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYL+VRNVPALGCGDDLLKLFSSYGNLEEC PMDAEECDEFTDVYFVKFHLVT+ARFAKRKLDEFVFLGNRLQVSYAPEFESLLDT+EKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM
        LDSGRPRGS VSSTTAK  +PS SHYTL QKNSLE RNYGD  LISNPHVS+ITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM
Subjt:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

TrEMBL top hitse value%identityAlignment
A0A0A0LQL2 RNA-binding protein 487.9e-10384.68Show/hide
Query:  LDNRKSEIGNRKSEIGS-------RRRRL-VRGCLALQTSPLRYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFA
        LDN K EIG+R  E          R   L VR       S  RYLIVRNVPALGCGDDL KLFSSYGNLEEC PMDAEECDEFTDVYFVKFHLVTNARFA
Subjt:  LDNRKSEIGNRKSEIGS-------RRRRL-VRGCLALQTSPLRYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFA

Query:  KRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSS
        KRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRG+ VSSTTAKL + S SHYTL QKNSLEKRNYGDAALISNPHVS+ITRVSS
Subjt:  KRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSS

Query:  DQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
        DQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
Subjt:  DQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI

A0A1S3BA34 RNA-binding protein 481.8e-9992.23Show/hide
Query:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGD L KLFSSYGNLEEC PMDAEECDEFTDVYFVKFH VTNARFAKRKLDEFVFLGNRLQVSYAPEFESL+DTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM
        LDSGRPRGS VSSTTAKL +PS S+YTL QKNSLE RNYGDAALIS+PHVS++TRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSR+
Subjt:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

A0A5A7V5K4 RNA-binding protein 481.8e-9992.23Show/hide
Query:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGD L KLFSSYGNLEEC PMDAEECDEFTDVYFVKFH VTNARFAKRKLDEFVFLGNRLQVSYAPEFESL+DTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM
        LDSGRPRGS VSSTTAKL +PS S+YTL QKNSLE RNYGDAALIS+PHVS++TRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSR+
Subjt:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

A0A6J1HAQ6 RNA-binding protein 481.5e-9889.81Show/hide
Query:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGD+LLKLFSSYGNLEEC PMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM
        L+SGRPRGS V+S T K  +PSHSHYTL QK+SLEKRNYGDAAL SNPHVS+ITRVSSDQDYFASESMNQTVHLVREKLDKIQS SEHL+AGP SK+SR+
Subjt:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

A0A6J1K7Z4 RNA-binding protein 481.1e-9990.78Show/hide
Query:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGD+LLKLFSSYGNLEEC PMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM
        LDSGRPRGS V+S T K  +PSHSHYTL QKNSLEKRNYGDAAL SNPHVS+ITRVSSDQDYFASESMNQTVHLVREKLDKIQS SEHL+AGP SK+SR+
Subjt:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

SwissProt top hitse value%identityAlignment
A4FVJ7 RNA-binding protein 484.7e-2033.69Show/hide
Query:  SNLWQIRKAELDNRKSEIGNRKSEIGSRRRRLVRGCLALQTSPLRYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNAR
        S++W  +K    + +  +   + +    RR        +     RYL+V+ VPA+G   +L++LF+ YG +EE  P+D    ++FT+VY ++F  +T+AR
Subjt:  SNLWQIRKAELDNRKSEIGNRKSEIGSRRRRLVRGCLALQTSPLRYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNAR

Query:  FAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREV------LARLDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKR
         AKR  DE  F G +L V YAPE+E++ +TK+KL+ RRR V       A+L S +   +T SS++    +   +   + QKN  E R
Subjt:  FAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREV------LARLDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKR

P46269 Cytochrome b-c1 complex subunit 85.8e-2673.24Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDLTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSHR
        MGKQPV++KAV+YA+SPFQQKIM GLW DL GKIHHK+SENWISA LL+ P+VGTY+Y Q + E EKL HR
Subjt:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDLTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSHR

Q5R4U2 RNA-binding protein 487.5e-1842.86Show/hide
Query:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVL
        +YL+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY +KF  + +AR AKRK+DE  F G  L V YAPEFE++ +T++KL+VR+  V+
Subjt:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVL

Q9FLB7 Cytochrome b-c1 complex subunit 8-2, mitochondrial3.1e-2777.46Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDLTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSHR
        MGKQPV++KAV+YALSPFQQKIMTGLW DL  KIHHK+SENWIS  LL+ PVVGTY+YAQ +KE EKL HR
Subjt:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDLTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSHR

Q9SG91 Cytochrome b-c1 complex subunit 8-1, mitochondrial4.7e-2880.28Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDLTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSHR
        MGKQPV++KAV+YALSPFQQKIMTGLW DL  KIHHK+SENWISA LL+TPVVGTY YAQ +KE EKL HR
Subjt:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDLTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSHR

Arabidopsis top hitse value%identityAlignment
AT2G27790.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.6e-5551.97Show/hide
Query:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RY+IVRNVPALGCGDDL++LF +YG +EEC PMDAE+C EFTDVY++KF L+TNARFAKRKLDE  FLGNRLQ+SYAPE+E++ DTK+KLE RR+EVLAR
Subjt:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPAS-----
        L+  + + ST   T    P+ + +     Q+  +E + +   A         +TRVSSDQ+YFAS SMNQTV  VREKL+KI+ S    +  P+S     
Subjt:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPAS-----

Query:  ------------------KKSRMDNRRRI
                          K++R+DNRRRI
Subjt:  ------------------KKSRMDNRRRI

AT2G27790.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.6e-5551.97Show/hide
Query:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RY+IVRNVPALGCGDDL++LF +YG +EEC PMDAE+C EFTDVY++KF L+TNARFAKRKLDE  FLGNRLQ+SYAPE+E++ DTK+KLE RR+EVLAR
Subjt:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPAS-----
        L+  + + ST   T    P+ + +     Q+  +E + +   A         +TRVSSDQ+YFAS SMNQTV  VREKL+KI+ S    +  P+S     
Subjt:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPAS-----

Query:  ------------------KKSRMDNRRRI
                          K++R+DNRRRI
Subjt:  ------------------KKSRMDNRRRI

AT3G10860.1 Cytochrome b-c1 complex, subunit 8 protein3.3e-2980.28Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDLTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSHR
        MGKQPV++KAV+YALSPFQQKIMTGLW DL  KIHHK+SENWISA LL+TPVVGTY YAQ +KE EKL HR
Subjt:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDLTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSHR

AT5G27300.1 pentatricopeptide (PPR) repeat-containing protein8.2e-5254.72Show/hide
Query:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RY+IVRNVPALGCGDDL++LF +YG +EEC PMDAE+C EFTDVY++KF L+TNA    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR+EVLAR
Subjt:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPAS-----
        L+   P  +  +S   KL  P+     L Q ++   R   +     +   + +TRVSS Q+YFAS SMNQ V  VREKL+KI+ S    +  P+S     
Subjt:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPAS-----

Query:  -KKSRMDNRRRI
         K++R+DNRRRI
Subjt:  -KKSRMDNRRRI

AT5G27300.2 pentatricopeptide (PPR) repeat-containing protein8.2e-5254.72Show/hide
Query:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RY+IVRNVPALGCGDDL++LF +YG +EEC PMDAE+C EFTDVY++KF L+TNA    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR+EVLAR
Subjt:  RYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPAS-----
        L+   P  +  +S   KL  P+     L Q ++   R   +     +   + +TRVSS Q+YFAS SMNQ V  VREKL+KI+ S    +  P+S     
Subjt:  LDSGRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPAS-----

Query:  -KKSRMDNRRRI
         K++R+DNRRRI
Subjt:  -KKSRMDNRRRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGCAACCGGTTCGGATGAAGGCTGTGATCTACGCTTTATCGCCGTTCCAGCAGAAGATCATGACAGGGTTATGGAACGACTTGACCGGCAAGATTCACCATAA
GATCTCCGAGAACTGGATCAGTGCGGCCCTTCTGATTACCCCCGTCGTCGGCACCTATACGTACGCACAGCAGTACAAGGAGAATGAAAAGTTGTCTCACAGGAGTGTTT
CAAATCTGTGGCAAATTAGAAAGGCGGAGTTAGATAATCGGAAATCGGAAATCGGAAATCGGAAATCTGAAATCGGATCTCGGAGAAGACGACTTGTTCGGGGATGCCTC
GCTTTACAGACGAGCCCCCTGCGGTATTTGATTGTGAGGAACGTCCCAGCATTGGGTTGTGGAGATGACTTGCTCAAATTGTTCTCCTCCTACGGAAACCTTGAAGAGTG
TACACCGATGGATGCAGAAGAATGTGATGAATTCACAGACGTTTATTTTGTAAAATTTCATTTGGTCACCAATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTT
TTCTTGGTAACCGGCTGCAAGTCTCTTATGCGCCTGAGTTTGAAAGCTTGCTTGATACAAAGGAAAAGCTAGAAGTTAGGAGACGAGAAGTTTTAGCACGATTGGATTCT
GGGAGACCAAGAGGATCTACAGTTAGTTCAACAACCGCAAAGCTTCCAAGTCCTTCTCATTCTCATTATACTCTTGGACAGAAGAACTCTCTTGAAAAGAGGAATTATGG
AGATGCAGCACTCATTTCCAATCCACACGTTTCTGAAATAACAAGAGTTTCCTCCGACCAGGATTACTTCGCATCTGAATCCATGAATCAAACTGTGCATCTCGTCAGGG
AAAAGCTTGATAAGATTCAATCAAGCAGCGAACATCTGCAAGCTGGACCAGCGAGCAAGAAGTCACGTATGGACAATAGGAGAAGAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATACAATTTTCTCAAAATCTGATTTAAATAAAAAGAAAGAAAAAAAAATTAAAAGAAAATCGCATCAGACGCTATACGATTTTTCAAGCGTCCGATGGGGAGAAAATCCA
ACGGTGAGTCTTAAAGTATTGAAATACGCAGTTAGTAAGAGAGCTTAGCTTAGATTTGGGAACAAGAGCCAACCCCTTTCGATCGAGAAGCCGCCATCTTCATCATATTC
GCCTGAGGCATTCGAGAGCCGCGTTTGAAGAAGAATTAGGATTGACATGGGGAAGCAACCGGTTCGGATGAAGGCTGTGATCTACGCTTTATCGCCGTTCCAGCAGAAGA
TCATGACAGGGTTATGGAACGACTTGACCGGCAAGATTCACCATAAGATCTCCGAGAACTGGATCAGTGCGGCCCTTCTGATTACCCCCGTCGTCGGCACCTATACGTAC
GCACAGCAGTACAAGGAGAATGAAAAGTTGTCTCACAGGAGTGTTTCAAATCTGTGGCAAATTAGAAAGGCGGAGTTAGATAATCGGAAATCGGAAATCGGAAATCGGAA
ATCTGAAATCGGATCTCGGAGAAGACGACTTGTTCGGGGATGCCTCGCTTTACAGACGAGCCCCCTGCGGTATTTGATTGTGAGGAACGTCCCAGCATTGGGTTGTGGAG
ATGACTTGCTCAAATTGTTCTCCTCCTACGGAAACCTTGAAGAGTGTACACCGATGGATGCAGAAGAATGTGATGAATTCACAGACGTTTATTTTGTAAAATTTCATTTG
GTCACCAATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTTCTTGGTAACCGGCTGCAAGTCTCTTATGCGCCTGAGTTTGAAAGCTTGCTTGATACAAAGGA
AAAGCTAGAAGTTAGGAGACGAGAAGTTTTAGCACGATTGGATTCTGGGAGACCAAGAGGATCTACAGTTAGTTCAACAACCGCAAAGCTTCCAAGTCCTTCTCATTCTC
ATTATACTCTTGGACAGAAGAACTCTCTTGAAAAGAGGAATTATGGAGATGCAGCACTCATTTCCAATCCACACGTTTCTGAAATAACAAGAGTTTCCTCCGACCAGGAT
TACTTCGCATCTGAATCCATGAATCAAACTGTGCATCTCGTCAGGGAAAAGCTTGATAAGATTCAATCAAGCAGCGAACATCTGCAAGCTGGACCAGCGAGCAAGAAGTC
ACGTATGGACAATAGGAGAAGAATCTAATGCTTGCCAACCTTTATAGAGACGGTTAATAGGTGTCTCAAAGTTGTATCAAAAGCTATTTTGACACATAGCATATACGCAG
ATTTGCAGTGTACATATTAATTTGCTTGATGTTTTATTTCAAAGGTTAAAATGGAATAGTGCATGTACCAAAGTTCTGTAAGGAGAGTTTTATTGTCATCACCATAACCC
ATATATTTGCTATCATCATTTCTCACATGAGGATCATGATTGCCGATTTATAGTTTACATTTGCATTTATTTA
Protein sequenceShow/hide protein sequence
MGKQPVRMKAVIYALSPFQQKIMTGLWNDLTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSHRSVSNLWQIRKAELDNRKSEIGNRKSEIGSRRRRLVRGCL
ALQTSPLRYLIVRNVPALGCGDDLLKLFSSYGNLEECTPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDS
GRPRGSTVSSTTAKLPSPSHSHYTLGQKNSLEKRNYGDAALISNPHVSEITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI