; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G002030 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G002030
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description60S ribosomal protein L37
Genome locationCG_Chr09:1877254..1878556
RNA-Seq ExpressionClCG09G002030
SyntenyClCG09G002030
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011331 - Ribosomal protein L37ae/L37e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3489293.1 60S ribosomal protein L37-3 [Gossypium australe]3.6e-2258.68Show/hide
Query:  RERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF
        RER + VLV+ G RP LS   VAA ASISRR    PVLSLLL                            +V+NWSVKAIRRKTTGTGRMRYLR+VPRRF
Subjt:  RERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF

Query:  KSGFRDGTEAAPRNKGAAASA
        K+GFR+GTEAAPR K AAASA
Subjt:  KSGFRDGTEAAPRNKGAAASA

KAB1218567.1 60S ribosomal protein L37 [Morella rubra]1.4e-2159.68Show/hide
Query:  LIYRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVP
        LI R R +  LVRGG RP     GVAAAASISRRVA  PV   L A                 N    W   V   NWSVKAIRRKTTGTGRMRYLR++P
Subjt:  LIYRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVP

Query:  RRFKSGFRDGTEAAPRNKGAAASA
        RRFKSGFR+GTEAAPR KGAAA+A
Subjt:  RRFKSGFRDGTEAAPRNKGAAASA

KAG7025798.1 60S ribosomal protein L37-2, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-3270.4Show/hide
Query:  RLIYRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNV
        RLIYR RVR VLVRGG RPILSVCG AAAASISRRV VQ VLSLL ASEN                           NWSVKAIRRKTTGTGRMRY+R+V
Subjt:  RLIYRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNV

Query:  PRRFKSGFRDGTEAAPRNKGAAASA
        PRRFKSGFR+GTEAAPRNKGAAASA
Subjt:  PRRFKSGFRDGTEAAPRNKGAAASA

PPD83667.1 hypothetical protein GOBAR_DD19392 [Gossypium barbadense]1.6e-2262.81Show/hide
Query:  RERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF
        RER + VLV+ G RP LS  GV A ASISRRV   PVLSLLL+           L L  F  +LLW    +  NWSVKA RRKTTGTGRMRYL +VPRRF
Subjt:  RERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF

Query:  KSGFRDGTEAAPRNKGAAASA
        K+GFR+GTEAAPRNK AAASA
Subjt:  KSGFRDGTEAAPRNKGAAASA

PPD93922.1 hypothetical protein GOBAR_DD09073 [Gossypium barbadense]3.1e-2160Show/hide
Query:  RERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF
        RER + VLV+ G RP LS  GVAA ASISR     PVLSLLL           G  L     +LLW    +  NWSVKAIRRKTTGTG+MRYLR+VPRRF
Subjt:  RERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF

Query:  KSGFRDGTEAAPRNK
        K+GFR+GTEAAPR K
Subjt:  KSGFRDGTEAAPRNK

TrEMBL top hitse value%identityAlignment
A0A2P5XZ09 Uncharacterized protein1.0e-1753.51Show/hide
Query:  LVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDG
        L R G R ILS   V   ASIS+R     V  L  ASEN++L+  + + +F F         +++ NWS+KAIRRKTTGTGRMRYLR+VPRRFK+GFR+G
Subjt:  LVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDG

Query:  TEAAPRNKGAAASA
        TEAAPR K A A++
Subjt:  TEAAPRNKGAAASA

A0A5B6X6B2 60S ribosomal protein L37-31.8e-2258.68Show/hide
Query:  RERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF
        RER + VLV+ G RP LS   VAA ASISRR    PVLSLLL                            +V+NWSVKAIRRKTTGTGRMRYLR+VPRRF
Subjt:  RERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRF

Query:  KSGFRDGTEAAPRNKGAAASA
        K+GFR+GTEAAPR K AAASA
Subjt:  KSGFRDGTEAAPRNKGAAASA

A0A5C7IJ18 Uncharacterized protein1.6e-2057.26Show/hide
Query:  YRERVRAVLVRGGIRPILSVCGVAAAASISRRV-AVQPVLSLLLASENID-LNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVP
        YRER + VLVRGG R  L V   A AASI RRV A+   + LL     I+ +N   G  +               +NWSVKAIRRKTTGTGRM+YLRNVP
Subjt:  YRERVRAVLVRGGIRPILSVCGVAAAASISRRV-AVQPVLSLLLASENID-LNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVP

Query:  RRFKSGFRDGTEAAPRNKGAAASA
        RRFKSGFR+GTEAAPR KGAAA+A
Subjt:  RRFKSGFRDGTEAAPRNKGAAASA

A0A6A1W379 60S ribosomal protein L376.7e-2259.68Show/hide
Query:  LIYRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVP
        LI R R +  LVRGG RP     GVAAAASISRRVA  PV   L A                 N    W   V   NWSVKAIRRKTTGTGRMRYLR++P
Subjt:  LIYRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVP

Query:  RRFKSGFRDGTEAAPRNKGAAASA
        RRFKSGFR+GTEAAPR KGAAA+A
Subjt:  RRFKSGFRDGTEAAPRNKGAAASA

A0A7J7G630 Uncharacterized protein4.5e-1854.92Show/hide
Query:  YRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRR
        +RE+ R    RGG R   S   VAA A ISRRV    V   LLA  ++ +++          A +L        NWSVKAIRRKTTGTGRMRYLRNVPRR
Subjt:  YRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRR

Query:  FKSGFRDGTEAAPRNKGAAASA
        FKSGFR+GTEAAPR KGAAA++
Subjt:  FKSGFRDGTEAAPRNKGAAASA

SwissProt top hitse value%identityAlignment
P49212 60S ribosomal protein L37 (Fragment)3.1e-1681.63Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA
        +NWSVKA+RRKTTGTGRMRYLRNVPRRFK+ FR+GTEAAPR KG AA++
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA

Q43292 60S ribosomal protein L37-21.3e-1787.76Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA
        +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFR+GTEA PRNKG A+SA
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA

Q8LEM8 60S ribosomal protein L37-31.8e-1683.67Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA
        +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFR+GTEA PR+K +A+SA
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA

Q8LFH7 60S ribosomal protein L37-19.0e-1681.63Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA
        +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+ FR+GT+A PRNK AA+S+
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA

Q9VXX8 Probable 60S ribosomal protein L37-A3.7e-0963.04Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAA
        +NWSVKA RRKTTGTGRM++L+ V RRF++GFR+GT+A P+   A+
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAA

Arabidopsis top hitse value%identityAlignment
AT1G15250.1 Zinc-binding ribosomal protein family protein6.4e-1781.63Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA
        +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+ FR+GT+A PRNK AA+S+
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA

AT1G52300.1 Zinc-binding ribosomal protein family protein8.9e-1987.76Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA
        +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFR+GTEA PRNKG A+SA
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA

AT3G16080.1 Zinc-binding ribosomal protein family protein1.3e-1783.67Show/hide
Query:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA
        +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFR+GTEA PR+K +A+SA
Subjt:  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCGATTTATGCTTCCGTATTATTGGTTTCAACTCTGTATTTTCGTTCGGTTAATCTACAGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAATAAGACCCAT
ACTCTCTGTGTGCGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGCTGTGCAGCCTGTGCTTTCCCTGCTGCTCGCAAGCGAAAATATTGATCTTAATCGGCTGT
TCGGCCTGTGTTTATTTTCATTCAATGCGTCGCTGCTTTGGATTTGTTTAGTGAACGTTCATAACTGGAGTGTGAAGGCAATTAGGAGAAAGACAACTGGAACTGGAAGA
ATGAGGTACTTGCGCAATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGATGGTACTGAAGCTGCACCCAGGAATAAAGGAGCAGCAGCATCAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTATCGATTTATGCTTCCGTATTATTGGTTTCAACTCTGTATTTTCGTTCGGTTAATCTACAGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAATAAGACCCAT
ACTCTCTGTGTGCGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGCTGTGCAGCCTGTGCTTTCCCTGCTGCTCGCAAGCGAAAATATTGATCTTAATCGGCTGT
TCGGCCTGTGTTTATTTTCATTCAATGCGTCGCTGCTTTGGATTTGTTTAGTGAACGTTCATAACTGGAGTGTGAAGGCAATTAGGAGAAAGACAACTGGAACTGGAAGA
ATGAGGTACTTGCGCAATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGATGGTACTGAAGCTGCACCCAGGAATAAAGGAGCAGCAGCATCAGCATAAGTTTTTTGGAA
GAAGTTCGACTTAATTTCAGTACCCAACTATAGTTTTCAGTAGGGTTTTTACTCATCTGAGAATCATTTCATATAATTTTGTTTTCTAGTTTTGCCTTTTCATGATTTAG
TTGAACGTGGTTTCCTTAAAATGTATTGTTTGAATTGTGGACAAATGATGAATCAGATTTTTCGTATTCTGCTACTTGTTTATGCATTTAAGCATACGATATGGTTTTCA
GTATCGAATATTAGAATCTGTTTTCCCACAGGGAATCCCTGCTTGAAATGATAAATTTGCTTGCACTTTTCACCATAGCCCATGCCATCATCAACCAGCGTAACAATAAT
CTCTTGCTTCTTTCTCCTAAACTTCAGCCATTGATCATGTTCATTACAGTGATCAACAATTCTTACAGTTTCTTCCCATCATCAAACTTTCTTTTGCTGTATTTGAATTG
AACGTGAAAGCACCCTTGGAGTCGGTAGTTTTAGTTTTAACAAAAGGCACGGGAAATTTTAATTTGGC
Protein sequenceShow/hide protein sequence
MYRFMLPYYWFQLCIFVRLIYRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGR
MRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA