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ClCG09G004680 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G004680
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr09:4152733..4153392
RNA-Seq ExpressionClCG09G004680
SyntenyClCG09G004680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI37008.3 unnamed protein product, partial [Vitis vinifera]2.2e-1840.96Show/hide
Query:  SFAVVHGSRSKAMQTRRSDSDRNRGN-RGIKIFRNLHSENAPPPIVALPVEEDSGVAGPRRPSAPIRNYNASIWVRRF-EHNNFCVELVKFAAPSTRAIR
        S   +HG RS+ + + R    R+ GN R +K  R +H+ENAPP I++LPV+ + G+AGP  P+  +  YN +++  RF E+NN  V+L+KF AP TR I 
Subjt:  SFAVVHGSRSKAMQTRRSDSDRNRGN-RGIKIFRNLHSENAPPPIVALPVEEDSGVAGPRRPSAPIRNYNASIWVRRF-EHNNFCVELVKFAAPSTRAIR

Query:  SNRHKLPTFRNRRTEIDGPRRSQPGNRVANVQRSGIQSGPAREGLL-------GVFMSRDEKESTI
         N ++L   RNR T ID   RSQ  N +  ++ SG+ S PA EGLL       G+ + R E E+ +
Subjt:  SNRHKLPTFRNRRTEIDGPRRSQPGNRVANVQRSGIQSGPAREGLL-------GVFMSRDEKESTI

TrEMBL top hitse value%identityAlignment
A0A5K0Z247 Uncharacterized protein7.9e-0629.47Show/hide
Query:  FLGNWDEFVQFGIKNLDVSEFTVGSSGSDDKSFAVVHGSRSKAMQTRRSDSDRNRGNRGIKIFRNLHSENAPPPIVALPVEEDSGVAGPRRPSAPIRNYN
        FLG+ DE     I++LDV+   VG         +     R + +   RSDS     + G         E+APPP+V LP+E+   + G RRP+A +    
Subjt:  FLGNWDEFVQFGIKNLDVSEFTVGSSGSDDKSFAVVHGSRSKAMQTRRSDSDRNRGNRGIKIFRNLHSENAPPPIVALPVEEDSGVAGPRRPSAPIRNYN

Query:  ASIWVRRFEHNNFCVELVKFAAPSTRAIRSNRHKLPTFRNRRTEIDGPRRSQPGNRVANVQRSGIQSGPAREGLLGVFMSRDEKESTISD
         +  + R E      ELV    P + A R +R  L   RN R EI      QP   +   Q   +   P   GL      RD  +   SD
Subjt:  ASIWVRRFEHNNFCVELVKFAAPSTRAIRSNRHKLPTFRNRRTEIDGPRRSQPGNRVANVQRSGIQSGPAREGLLGVFMSRDEKESTISD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATCCGGATTCAATTTCTGGGTAATTGGGATGAATTCGTCCAATTCGGAATTAAAAATCTCGATGTGTCGGAATTTACTGTCGGCTCTTCGGGTAGCGACGACAA
GTCGTTTGCTGTCGTTCATGGCAGCCGGAGTAAAGCAATGCAGACCCGCCGGAGTGACTCGGATCGGAACAGAGGAAACAGAGGAATCAAGATTTTCAGGAATCTCCACT
CTGAAAATGCTCCACCACCCATCGTCGCCCTTCCGGTGGAAGAAGACAGTGGAGTCGCCGGACCACGACGGCCATCCGCCCCGATCCGAAACTACAACGCGTCGATCTGG
GTCAGAAGATTTGAACACAACAATTTCTGTGTGGAGCTCGTGAAATTCGCCGCCCCAAGTACGAGAGCCATAAGAAGCAACCGCCACAAACTTCCCACTTTCCGAAACCG
CCGGACTGAAATCGACGGACCCAGGAGGAGTCAGCCGGGTAACCGAGTCGCCAACGTCCAACGGAGTGGAATACAGAGCGGACCAGCTCGTGAAGGGCTTTTGGGGGTTT
TCATGAGCAGAGATGAAAAAGAGTCGACCATTTCTGACGATGGGCCGGTCGTGAAAGCAGCTTCCGGGGGCGGAAGGGAGCAATTTGGGGGCGGAATTAGGAGAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATCCGGATTCAATTTCTGGGTAATTGGGATGAATTCGTCCAATTCGGAATTAAAAATCTCGATGTGTCGGAATTTACTGTCGGCTCTTCGGGTAGCGACGACAA
GTCGTTTGCTGTCGTTCATGGCAGCCGGAGTAAAGCAATGCAGACCCGCCGGAGTGACTCGGATCGGAACAGAGGAAACAGAGGAATCAAGATTTTCAGGAATCTCCACT
CTGAAAATGCTCCACCACCCATCGTCGCCCTTCCGGTGGAAGAAGACAGTGGAGTCGCCGGACCACGACGGCCATCCGCCCCGATCCGAAACTACAACGCGTCGATCTGG
GTCAGAAGATTTGAACACAACAATTTCTGTGTGGAGCTCGTGAAATTCGCCGCCCCAAGTACGAGAGCCATAAGAAGCAACCGCCACAAACTTCCCACTTTCCGAAACCG
CCGGACTGAAATCGACGGACCCAGGAGGAGTCAGCCGGGTAACCGAGTCGCCAACGTCCAACGGAGTGGAATACAGAGCGGACCAGCTCGTGAAGGGCTTTTGGGGGTTT
TCATGAGCAGAGATGAAAAAGAGTCGACCATTTCTGACGATGGGCCGGTCGTGAAAGCAGCTTCCGGGGGCGGAAGGGAGCAATTTGGGGGCGGAATTAGGAGAATCTGA
Protein sequenceShow/hide protein sequence
MEIRIQFLGNWDEFVQFGIKNLDVSEFTVGSSGSDDKSFAVVHGSRSKAMQTRRSDSDRNRGNRGIKIFRNLHSENAPPPIVALPVEEDSGVAGPRRPSAPIRNYNASIW
VRRFEHNNFCVELVKFAAPSTRAIRSNRHKLPTFRNRRTEIDGPRRSQPGNRVANVQRSGIQSGPAREGLLGVFMSRDEKESTISDDGPVVKAASGGGREQFGGGIRRI