; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G006830 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G006830
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionMicrosomal signal peptidase 12 kDa subunit (SPC12)
Genome locationCG_Chr09:5910287..5917477
RNA-Seq ExpressionClCG09G006830
SyntenyClCG09G006830
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006465 - signal peptide processing (biological process)
GO:0045047 - protein targeting to ER (biological process)
GO:0005787 - signal peptidase complex (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR009542 - Signal peptidase complex subunit Spc1/SPCS1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51679.1 hypothetical protein Csa_009252 [Cucumis sativus]2.2e-3575.47Show/hide
Query:  LWTAHRRLQIGLQMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILK
        L+ A     +   MDW GQKLAEQLMQ+MLVAFA+VAF TG+VMGSF++MILVYAG VFLTTLITVPNWPFFN HPL WLD S+A+KYPKPQ QEPV+LK
Subjt:  LWTAHRRLQIGLQMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILK

Query:  KKPAKK
        KKPAKK
Subjt:  KKPAKK

XP_004135313.1 probable signal peptidase complex subunit 1 [Cucumis sativus]2.8e-3583.87Show/hide
Query:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK
        MDW GQKLAEQLMQ+MLVAFA+VAF TG+VMGSF++MILVYAG VFLTTLITVPNWPFFN HPL WLD S+A+KYPKPQ QEPV+LKKKPAKK
Subjt:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK

XP_008446045.1 PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo]3.7e-3584.95Show/hide
Query:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK
        MDW GQKLAEQLMQIMLVAFA+VAF TG+VMGSF+MMILVYAG VFLTTLITVPNWPFFN HPL WLD S+A+KYPKPQ QEPV+ KKKPAKK
Subjt:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK

XP_023549840.1 probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo]2.0e-3381.72Show/hide
Query:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK
        MDW GQKLAEQ+MQIMLVAFA+VAF TG+VM SF+MM+LVYAG V LTTLITVPNWPFFN HPL WLD SVA+KYPKPQ QEPV+LKKKP KK
Subjt:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK

XP_038882954.1 probable signal peptidase complex subunit 1 [Benincasa hispida]5.4e-3482.8Show/hide
Query:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK
        MDW GQKLAEQLMQIMLVAFA+VAF TG++MGSF+MMILVYAG V LTTLITVPNWPFFN HPL WLD S+A+KYPKPQ QEPV+LKKK AKK
Subjt:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK

TrEMBL top hitse value%identityAlignment
A0A0A0KS09 Uncharacterized protein1.1e-3575.47Show/hide
Query:  LWTAHRRLQIGLQMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILK
        L+ A     +   MDW GQKLAEQLMQ+MLVAFA+VAF TG+VMGSF++MILVYAG VFLTTLITVPNWPFFN HPL WLD S+A+KYPKPQ QEPV+LK
Subjt:  LWTAHRRLQIGLQMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILK

Query:  KKPAKK
        KKPAKK
Subjt:  KKPAKK

A0A1S3BET6 probable signal peptidase complex subunit 11.8e-3584.95Show/hide
Query:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK
        MDW GQKLAEQLMQIMLVAFA+VAF TG+VMGSF+MMILVYAG VFLTTLITVPNWPFFN HPL WLD S+A+KYPKPQ QEPV+ KKKPAKK
Subjt:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK

A0A5D3CZV6 Putative signal peptidase complex subunit 11.8e-3584.95Show/hide
Query:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK
        MDW GQKLAEQLMQIMLVAFA+VAF TG+VMGSF+MMILVYAG VFLTTLITVPNWPFFN HPL WLD S+A+KYPKPQ QEPV+ KKKPAKK
Subjt:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK

A0A6J1GX63 probable signal peptidase complex subunit 11.4e-3280.65Show/hide
Query:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK
        MDW GQKLAEQ+MQIMLVAFA+VAF TG+VM SF+MM+LVYAG V LTTLITVPNWPFFN HPL WLD  VA+KYPKPQ QEPV LKKKP KK
Subjt:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK

A0A6J1KDF1 probable signal peptidase complex subunit 11.1e-3280.65Show/hide
Query:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK
        MDW GQKLAEQ+MQIMLVAFA+VAF TG+VM SF+MM+LVYA  V LTTLITVPNWPFFN HPL WLD SVA+KYPKPQ QEPV+LKKKP KK
Subjt:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK

SwissProt top hitse value%identityAlignment
B0FWK4 Signal peptidase complex subunit 11.2e-0738.75Show/hide
Query:  QMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWL---DLSVADKYP
        QMD+ GQKLAEQ+ Q +++  A+V F  G+V   F   + +       + L+T+P WP +  HPL WL   D    DK P
Subjt:  QMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWL---DLSVADKYP

Q3T134 Signal peptidase complex subunit 19.0e-0838.75Show/hide
Query:  QMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWL---DLSVADKYP
        QMD+ GQKLAEQ+ Q +++  A+V F  G++   F   + +       + L+T+P WP +  HPL WL   D S  DK P
Subjt:  QMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWL---DLSVADKYP

Q944J0 Probable signal peptidase complex subunit 14.9e-2260.22Show/hide
Query:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK
        MDW GQKL EQLMQI+LV   +VA   G+   SF+ M+L+YAG V LTTL+TVPNWPF+N HPL WLD S A+K+PKP+    V  KKK +KK
Subjt:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK

Q9D958 Signal peptidase complex subunit 16.9e-0839.74Show/hide
Query:  QMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWL---DLSVADK
        QMD+ GQKLAEQ+ Q +++  A+V F  G+V   F   + +       + L+T+P WP +  HPL WL   DL   DK
Subjt:  QMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWL---DLSVADK

Q9Y6A9 Signal peptidase complex subunit 11.5e-0738.75Show/hide
Query:  QMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWL---DLSVADKYP
        QMD+ GQKLAEQ+ Q +++  A+V F  G+V   F   + +       + L+T+P WP +  HPL WL   + S  DK P
Subjt:  QMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWL---DLSVADKYP

Arabidopsis top hitse value%identityAlignment
AT2G22425.1 Microsomal signal peptidase 12 kDa subunit (SPC12)3.5e-2360.22Show/hide
Query:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK
        MDW GQKL EQLMQI+LV   +VA   G+   SF+ M+L+YAG V LTTL+TVPNWPF+N HPL WLD S A+K+PKP+    V  KKK +KK
Subjt:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK

AT2G22425.2 Microsomal signal peptidase 12 kDa subunit (SPC12)3.5e-2360.22Show/hide
Query:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK
        MDW GQKL EQLMQI+LV   +VA   G+   SF+ M+L+YAG V LTTL+TVPNWPF+N HPL WLD S A+K+PKP+    V  KKK +KK
Subjt:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK

AT4G40042.1 Microsomal signal peptidase 12 kDa subunit (SPC12)5.4e-2460.22Show/hide
Query:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK
        MDW GQKLAEQLMQI+L+  A+V+F  G+   SF+MM+L+YAG V LTTLIT+PNWP FN H L WLD S A+K+PKPQ       KK  +KK
Subjt:  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATACCGCCGGCTGATCATTCCCCTTTGGACTGCACATCGTCGTCTCCAAATTGGCCTGCAGATGGACTGGGTAGGGCAAAAGCTAGCGGAGCAGCTGATGCAAAT
TATGTTGGTTGCATTTGCCATGGTGGCCTTTTCAACAGGCTTTGTTATGGGATCGTTTCAAATGATGATCTTGGTTTACGCTGGTGCTGTGTTTCTCACCACATTAATCA
CTGTTCCAAATTGGCCTTTCTTCAATCACCACCCGCTCAACTGGTTGGATCTTAGTGTGGCTGACAAATACCCTAAGCCGCAATCGCAGGAGCCCGTGATTTTGAAGAAA
AAACCTGCTAAGAAGGAACTTGTAGAAGCTCAGAAGTTCTGCCAAAAACATAAACCACTATTGAAAATGTTTCCAAGTATTTGTCATCCTGGAACAGTAGCTGCACCAAA
ATACAACTGTATAATCATACCACGAAGTTCCATTTCCACAAGGTCCAACAGTTCAGGATCATCAACAGCGTCAACTTTATTCAAAAAGCACACAAGTGATGGAACACCAA
CCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATACCGCCGGCTGATCATTCCCCTTTGGACTGCACATCGTCGTCTCCAAATTGGCCTGCAGATGGACTGGGTAGGGCAAAAGCTAGCGGAGCAGCTGATGCAAAT
TATGTTGGTTGCATTTGCCATGGTGGCCTTTTCAACAGGCTTTGTTATGGGATCGTTTCAAATGATGATCTTGGTTTACGCTGGTGCTGTGTTTCTCACCACATTAATCA
CTGTTCCAAATTGGCCTTTCTTCAATCACCACCCGCTCAACTGGTTGGATCTTAGTGTGGCTGACAAATACCCTAAGCCGCAATCGCAGGAGCCCGTGATTTTGAAGAAA
AAACCTGCTAAGAAGGAACTTGTAGAAGCTCAGAAGTTCTGCCAAAAACATAAACCACTATTGAAAATGTTTCCAAGTATTTGTCATCCTGGAACAGTAGCTGCACCAAA
ATACAACTGTATAATCATACCACGAAGTTCCATTTCCACAAGGTCCAACAGTTCAGGATCATCAACAGCGTCAACTTTATTCAAAAAGCACACAAGTGATGGAACACCAA
CCTGATTAATGCAATAAAACAAATCTATGGTGCATCAACATTACATCCTGAATTCATATATAAACGAGGCTAAAATCTGCAGAAAACACAATGTGCTCCAAATGAACAAA
TGTACACCTGCCGTGCTAGTAGAATATGCTCCTTTGTCTGAGGCATGGCCCCATCAGGGCCAGACACAACGAGGATACCACCATCCATTTGAGCAGCTCCAGTAATCATG
TTCTGCACCAAGTACCACCATCTTTCACTAATCGTTATAACAACTCAGACAATTAGAAAAAGTAACCAATGGATGTAATTGGTGTGCCATTGGATGTTAACTGACATATT
TTCACTAATCGTTATAAGAACTCAGACAATGAGAAAAAGTAACCAATGGATGTAATTGGTGTGCCATTGGATGTTAACACTGACATATTGTATATCTGTAAATCCGTGTT
ATAAGTTT
Protein sequenceShow/hide protein sequence
MQYRRLIIPLWTAHRRLQIGLQMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKK
KPAKKELVEAQKFCQKHKPLLKMFPSICHPGTVAAPKYNCIIIPRSSISTRSNSSGSSTASTLFKKHTSDGTPT