; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G009352 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G009352
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionS-protein homolog
Genome locationCG_Chr09:8927691..8928155
RNA-Seq ExpressionClCG09G009352
SyntenyClCG09G009352
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646231.1 hypothetical protein Csa_023825, partial [Cucumis sativus]1.9e-4568.97Show/hide
Query:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL
        LEKW IH+VNGLS GQ+LL HCKSKDNDLGE  L A +EFNW FRVN W++TLFWC+L+KPNGQH SFE+FW+E  S+WLY  C E NC WTAKDDGIYL
Subjt:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL

Query:  ANNPD-KTQLLIHKWD
         +N D    +LIHKW+
Subjt:  ANNPD-KTQLLIHKWD

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]1.7e-4960.67Show/hide
Query:  IGAKKMKKETVIWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQ
        +G +  KK    +LV +LVL LV++  +E  +E   L+KW+IH+VNGLS GQ L VHCKSKDNDLGEHNL + +EFNW+FRVNLW++TLFWC+L KP+G+
Subjt:  IGAKKMKKETVIWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQ

Query:  HKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
          SF+ FWVEK+SIWL+YRC  SNC WTAKDDGIYL +NP +  +L+H+W
Subjt:  HKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

XP_022143780.1 S-protein homolog 1-like [Momordica charantia]1.1e-4863.77Show/hide
Query:  WLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKE
        +LV + V  L +V ++E +    PL KW+IH+ N LS  QML VHCKSK++DLGEHNL+  +EFNW FRVN+WD+TL+WC+L+KPNGQ  SF+AFWVEK+
Subjt:  WLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKE

Query:  SIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        SIWLYY+CLESNCTW AKDDGIYL NNPD   + +HKW
Subjt:  SIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

XP_031745090.1 S-protein homolog 1-like [Cucumis sativus]3.9e-4659.18Show/hide
Query:  MKKETVIWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFE
        MKK+ V+ L V+ + +L       +  +   LEKW IH+VNGLS GQ+LL HCKSKDNDLGE  L A +EFNW FRVN W++TLFWC+L+KPNGQH SFE
Subjt:  MKKETVIWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFE

Query:  AFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPD-KTQLLIHKWD
        +FW+E  S+WLY  C E NC WTAKDDGIYL +N D    +LIHKW+
Subjt:  AFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPD-KTQLLIHKWD

XP_038896594.1 S-protein homolog 1-like [Benincasa hispida]1.1e-4559.7Show/hide
Query:  LVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLY
        +VL  VL   M    + + L KW+IH+VNGLS GQ+L VHCKSKDNDLGEH L+  +EFNW FRVN W++TLFWC+L+KPN QH SF+AFW+E  S+WLY
Subjt:  LVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLY

Query:  YRCLESNCTWTAKDDGIYLANNPDKTQLLIHKWD
          C +SNC W AKDDG+YL +N +   +LIHKW+
Subjt:  YRCLESNCTWTAKDDGIYLANNPDKTQLLIHKWD

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog1.3e-4256.3Show/hide
Query:  VVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIW
        +V   + VL   + +  +   LE+W IHIVNGLS  Q L VHC+SKD+DLG+  L+  +EFNW+F++N WD+TLFWC+L+KPN +  SFEAFWVE++SIW
Subjt:  VVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIW

Query:  LYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        L+YRC +SNC WTAKDDGIYL +NP     L+H W
Subjt:  LYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

A0A6J1CPR8 S-protein homolog5.3e-4963.77Show/hide
Query:  WLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKE
        +LV + V  L +V ++E +    PL KW+IH+ N LS  QML VHCKSK++DLGEHNL+  +EFNW FRVN+WD+TL+WC+L+KPNGQ  SF+AFWVEK+
Subjt:  WLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKE

Query:  SIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        SIWLYY+CLESNCTW AKDDGIYL NNPD   + +HKW
Subjt:  SIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

A0A6J1CQH6 S-protein homolog2.6e-4355.33Show/hide
Query:  IGAKKMKKETVIWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQ
        +G + +KK    +LVV+L L L +V    +      L++W IH+VNGL  G++L VHCKS+D+DLGE NL   +EF+W+FRVN+ D+TLFWCFLRKP+ Q
Subjt:  IGAKKMKKETVIWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQ

Query:  HKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
          SF+AFWVEK SIWL+YRC ++NC WTAKDDG+YL +NP +  +L+HKW
Subjt:  HKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

A0A6J1CRU0 S-protein homolog8.2e-5060.67Show/hide
Query:  IGAKKMKKETVIWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQ
        +G +  KK    +LV +LVL LV++  +E  +E   L+KW+IH+VNGLS GQ L VHCKSKDNDLGEHNL + +EFNW+FRVNLW++TLFWC+L KP+G+
Subjt:  IGAKKMKKETVIWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQ

Query:  HKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
          SF+ FWVEK+SIWL+YRC  SNC WTAKDDGIYL +NP +  +L+H+W
Subjt:  HKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

A0A6J1KS80 S-protein homolog1.3e-3953.79Show/hide
Query:  VLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYY
        VLV V+   +  +A   P  KWEIHI NGLS GQ + VHC+SKDNDLGEH L  ++EF W F+VNLWD+TL+WC+LRKPNG   +F++FWVEK + WL  
Subjt:  VLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYY

Query:  RCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        +C ++ C WTA+D+GIYL +N +     +H W
Subjt:  RCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 65.0e-1230.43Show/hide
Query:  VVVLVLVLVLVGRMEQMAEGS--PLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKE
        +++ ++++ L+G      +G   P++     +V       +L VHCKS+D+D G H L     + W F VN  +STL++C   +   +   F+ +   ++
Subjt:  VVVLVLVLVLVGRMEQMAEGS--PLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKE

Query:  SIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        S     RC   NCTW AK+DGIY      K   L +KW
Subjt:  SIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

F4JLS0 S-protein homolog 11.2e-2643.48Show/hide
Query:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL
        + +W++ +VNGL+ G+ L +HCKSK++DLGE NL   + F+W+F  N+  ST FWC++ K NG H +   FW   + + L++RC   NC WTAK DG+YL
Subjt:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL

Query:  ANNPDKTQLLIHKWD
         N+     +L  KW+
Subjt:  ANNPDKTQLLIHKWD

P0DN92 S-protein homolog 241.3e-1229.5Show/hide
Query:  IWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEK
        I++V ++V+ L+    ++      P+      +        +L +HCKS+D+DLG H L     F W F VN   STL++C   +   +   FE +   +
Subjt:  IWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEK

Query:  ESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        +    +YRC  +NCTW A+ DGIY  +       L + W
Subjt:  ESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

Q2HQ46 S-protein homolog 744.7e-2642.98Show/hide
Query:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL
        + +W++ + NGL+ G+ L +HCKSK+NDLG+ NL     F+W+F  N+  STLFWC++ K +G H + + FW   + + L++RC   NC WTAK+DG+YL
Subjt:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL

Query:  ANNPDKTQLLIHKW
         N+     +L  KW
Subjt:  ANNPDKTQLLIHKW

Q9FI84 S-protein homolog 271.1e-1128.78Show/hide
Query:  IWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEK
        ++ + ++++ +      +Q  E  P+      I    +   +L +HCKSKD+DLG H       + W F VN  +STL++C   +       F+    E+
Subjt:  IWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEK

Query:  ESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        +    +YRC   NCTW AK D +Y  +N  +T     KW
Subjt:  ESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

Arabidopsis top hitse value%identityAlignment
AT4G16295.1 S-protein homologue 18.8e-2843.48Show/hide
Query:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL
        + +W++ +VNGL+ G+ L +HCKSK++DLGE NL   + F+W+F  N+  ST FWC++ K NG H +   FW   + + L++RC   NC WTAK DG+YL
Subjt:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL

Query:  ANNPDKTQLLIHKWD
         N+     +L  KW+
Subjt:  ANNPDKTQLLIHKWD

AT4G29035.1 Plant self-incompatibility protein S1 family3.3e-2742.98Show/hide
Query:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL
        + +W++ + NGL+ G+ L +HCKSK+NDLG+ NL     F+W+F  N+  STLFWC++ K +G H + + FW   + + L++RC   NC WTAK+DG+YL
Subjt:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL

Query:  ANNPDKTQLLIHKW
         N+     +L  KW
Subjt:  ANNPDKTQLLIHKW

AT5G04350.1 Plant self-incompatibility protein S1 family1.6e-1335Show/hide
Query:  EIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFL-RKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANN
        ++ + N L   ++L VHC+SKD+DLGEH L    ++ ++F  N+W +T F C + + PN +H      +V  E+ W   + LE++C W  ++DGIY + +
Subjt:  EIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFL-RKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANN

AT5G06020.1 Plant self-incompatibility protein S1 family8.0e-1328.78Show/hide
Query:  IWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEK
        ++ + ++++ +      +Q  E  P+      I    +   +L +HCKSKD+DLG H       + W F VN  +STL++C   +       F+    E+
Subjt:  IWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEK

Query:  ESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        +    +YRC   NCTW AK D +Y  +N  +T     KW
Subjt:  ESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

AT5G06030.1 Plant self-incompatibility protein S1 family2.2e-1026.95Show/hide
Query:  IWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEK
        I+++ ++V+ L+    ++      P       +        +L +HCKS+D+DLG H L     F W F VN   STL +C   +       F  +   +
Subjt:  IWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEK

Query:  ESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKWDN
        +    +YRC  +NCTW A+ DG +   +      L + W N
Subjt:  ESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKWDN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATTGGAGCGAAAAAGATGAAGAAGGAGACAGTAATTTGGTTGGTGGTTGTGTTGGTGTTGGTGTTGGTGTTGGTGGGGAGAATGGAGCAAATGGCCGAAGGAAG
CCCTCTTGAGAAATGGGAAATTCACATAGTGAATGGGCTAAGCAAAGGCCAAATGTTGCTTGTTCACTGCAAATCAAAAGACAATGATCTTGGAGAACACAACCTCACAG
CTGCCTCTGAATTCAATTGGTCTTTCAGAGTTAACTTGTGGGACTCAACCTTGTTTTGGTGTTTCCTAAGAAAGCCAAATGGACAACATAAGTCTTTTGAGGCTTTTTGG
GTTGAAAAAGAGTCCATTTGGCTCTATTATAGATGCTTGGAATCCAATTGCACTTGGACTGCCAAAGATGATGGAATCTACCTTGCAAACAACCCTGACAAGACTCAACT
TTTGATTCATAAATGGGATAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAATTGGAGCGAAAAAGATGAAGAAGGAGACAGTAATTTGGTTGGTGGTTGTGTTGGTGTTGGTGTTGGTGTTGGTGGGGAGAATGGAGCAAATGGCCGAAGGAAG
CCCTCTTGAGAAATGGGAAATTCACATAGTGAATGGGCTAAGCAAAGGCCAAATGTTGCTTGTTCACTGCAAATCAAAAGACAATGATCTTGGAGAACACAACCTCACAG
CTGCCTCTGAATTCAATTGGTCTTTCAGAGTTAACTTGTGGGACTCAACCTTGTTTTGGTGTTTCCTAAGAAAGCCAAATGGACAACATAAGTCTTTTGAGGCTTTTTGG
GTTGAAAAAGAGTCCATTTGGCTCTATTATAGATGCTTGGAATCCAATTGCACTTGGACTGCCAAAGATGATGGAATCTACCTTGCAAACAACCCTGACAAGACTCAACT
TTTGATTCATAAATGGGATAATTAA
Protein sequenceShow/hide protein sequence
MIIGAKKMKKETVIWLVVVLVLVLVLVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFW
VEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKWDN