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ClCG09G009358 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G009358
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionS-protein homolog
Genome locationCG_Chr09:8935125..8935569
RNA-Seq ExpressionClCG09G009358
SyntenyClCG09G009358
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067970.1 uncharacterized protein E6C27_scaffold138G001560 [Cucumis melo var. makuwa]2.4e-3453.06Show/hide
Query:  MYEEKKHLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL-----------------------------------------KPNFKVSFES
        MYEEK +L VV+ LV+  +A+VQ C AVPLPLP+W IHVVNGLNNETLL                                         KPNF VSFES
Subjt:  MYEEKKHLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL-----------------------------------------KPNFKVSFES

Query:  FWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKI
        FWVE +HPWL SRCF  +CIWIAKDD +YLRNN  NVDE +H+WNKI
Subjt:  FWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKI

KAE8646232.1 hypothetical protein Csa_016625, partial [Cucumis sativus]9.7e-2854.14Show/hide
Query:  HLAVV-LFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL----------------------------------------KPNFKVSFESFWVEST
        HLAVV L +V+  M +VQ C AVP+P PRWHIHVVNGL+NETLL                                        KPNF VSFESFWVE  
Subjt:  HLAVV-LFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL----------------------------------------KPNFKVSFESFWVEST

Query:  HPWLASRCFDKNCIWIAKDDGIYLRNNPINVDE
        H WL SRC+DKNCIWIAKDDGIYLRNNP+N+DE
Subjt:  HPWLASRCFDKNCIWIAKDDGIYLRNNPINVDE

XP_004139722.1 S-protein homolog 1-like [Cucumis sativus]2.2e-3254.93Show/hide
Query:  HLAVV-LFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL----------------------------------------KPNFKVSFESFWVEST
        HLAVV L +V+  M +VQ C AVP+P PRWHIHVVNGL+NETLL                                        KPNF VSFESFWVE  
Subjt:  HLAVV-LFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL----------------------------------------KPNFKVSFESFWVEST

Query:  HPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKIA
        H WL SRC+DKNCIWIAKDDGIYLRNNP+N+DE VH WNK+A
Subjt:  HPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKIA

XP_008461539.1 PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]9.1e-3453.06Show/hide
Query:  MYEEKKHLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL-----------------------------------------KPNFKVSFES
        MYE+   LA+ L LV+  + +VQ   AVPLPLP+WHIHVVNGL N+TL                                          KPNF V+FES
Subjt:  MYEEKKHLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL-----------------------------------------KPNFKVSFES

Query:  FWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKI
        FWVE THPWL SRCFDKNCIWIAKDDGIYLRNN  NVDELVH WNK+
Subjt:  FWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKI

XP_008462114.1 PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]1.3e-3255Show/hide
Query:  HLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL----------------------------------------KPNFKVSFESFWVESTH
        HLAVV  LV+  M +VQ C AVP+P PRWHIHVVNGL+NETLL                                        KPNF VSFESFWVE  H
Subjt:  HLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL----------------------------------------KPNFKVSFESFWVESTH

Query:  PWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKI
         WL SRC+DKNCIWIAKDDGIYLRNNP+N++E VH WNKI
Subjt:  PWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKI

TrEMBL top hitse value%identityAlignment
A0A1S3CEQ0 S-protein homolog4.4e-3453.06Show/hide
Query:  MYEEKKHLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL-----------------------------------------KPNFKVSFES
        MYE+   LA+ L LV+  + +VQ   AVPLPLP+WHIHVVNGL N+TL                                          KPNF V+FES
Subjt:  MYEEKKHLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL-----------------------------------------KPNFKVSFES

Query:  FWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKI
        FWVE THPWL SRCFDKNCIWIAKDDGIYLRNN  NVDELVH WNK+
Subjt:  FWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKI

A0A1S3CG89 S-protein homolog6.4e-3355Show/hide
Query:  HLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL----------------------------------------KPNFKVSFESFWVESTH
        HLAVV  LV+  M +VQ C AVP+P PRWHIHVVNGL+NETLL                                        KPNF VSFESFWVE  H
Subjt:  HLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL----------------------------------------KPNFKVSFESFWVESTH

Query:  PWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKI
         WL SRC+DKNCIWIAKDDGIYLRNNP+N++E VH WNKI
Subjt:  PWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKI

A0A5A7VL75 S-protein homolog1.2e-3453.06Show/hide
Query:  MYEEKKHLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL-----------------------------------------KPNFKVSFES
        MYEEK +L VV+ LV+  +A+VQ C AVPLPLP+W IHVVNGLNNETLL                                         KPNF VSFES
Subjt:  MYEEKKHLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL-----------------------------------------KPNFKVSFES

Query:  FWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKI
        FWVE +HPWL SRCF  +CIWIAKDD +YLRNN  NVDE +H+WNKI
Subjt:  FWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKI

A0A6J1CPC6 S-protein homolog4.1e-2444.9Show/hide
Query:  MYEEKKHLAVVLFLVVATMAMVQLCAAVPLP---LPRWHIHVVNGLNNETLL-----------------------------------------KPNFKVS
        MY + + + VV+FLV    A++QL  A  L    LP+WHIHVVNGL+  TL                                          KPN  VS
Subjt:  MYEEKKHLAVVLFLVVATMAMVQLCAAVPLP---LPRWHIHVVNGLNNETLL-----------------------------------------KPNFKVS

Query:  FESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQW
        FESFWVE TH WL  RC DKNCIW AKDDGIYLRNNP  VDE +H+W
Subjt:  FESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQW

A0A6J1DPJ1 S-protein homolog3.4e-1840.15Show/hide
Query:  VVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL------------------------------------------KPNFKVSFESFWVESTHP
        +V ++V+  +    +   +P+PL +W+IHVVNGL+N   L                                          KPN  VSF+SFWVE TH 
Subjt:  VVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLL------------------------------------------KPNFKVSFESFWVESTHP

Query:  WLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWN
        WL  RC D  CIW AKDDGIYLRN P N DELVH+WN
Subjt:  WLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWN

SwissProt top hitse value%identityAlignment
Q2HQ46 S-protein homolog 747.8e-0451.43Show/hide
Query:  LASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQW
        L  RC  KNC+W AK+DG+YL N+ I  D L  +W
Subjt:  LASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQW

Arabidopsis top hitse value%identityAlignment
AT4G16295.1 S-protein homologue 17.2e-0540.74Show/hide
Query:  KPNFKVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQW
        K N  ++   FW +     L  RC  KNCIW AK DG+YL N+    D L  +W
Subjt:  KPNFKVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQW

AT4G29035.1 Plant self-incompatibility protein S1 family5.5e-0551.43Show/hide
Query:  LASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQW
        L  RC  KNC+W AK+DG+YL N+ I  D L  +W
Subjt:  LASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGAAGAAAAGAAGCATCTGGCAGTGGTTCTTTTTCTTGTGGTGGCGACTATGGCAATGGTACAGCTATGCGCGGCGGTTCCACTGCCACTCCCAAGGTGGCACAT
TCATGTGGTAAATGGGTTGAACAATGAAACCCTGTTGAAGCCAAATTTTAAAGTATCGTTTGAATCTTTTTGGGTTGAAAGCACTCACCCTTGGCTTGCTTCTAGGTGCT
TTGACAAAAATTGTATTTGGATTGCTAAAGATGATGGAATTTACTTGAGAAATAATCCTATTAATGTTGATGAACTTGTACATCAGTGGAACAAGATAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATGAAGAAAAGAAGCATCTGGCAGTGGTTCTTTTTCTTGTGGTGGCGACTATGGCAATGGTACAGCTATGCGCGGCGGTTCCACTGCCACTCCCAAGGTGGCACAT
TCATGTGGTAAATGGGTTGAACAATGAAACCCTGTTGAAGCCAAATTTTAAAGTATCGTTTGAATCTTTTTGGGTTGAAAGCACTCACCCTTGGCTTGCTTCTAGGTGCT
TTGACAAAAATTGTATTTGGATTGCTAAAGATGATGGAATTTACTTGAGAAATAATCCTATTAATGTTGATGAACTTGTACATCAGTGGAACAAGATAGCTTAG
Protein sequenceShow/hide protein sequence
MYEEKKHLAVVLFLVVATMAMVQLCAAVPLPLPRWHIHVVNGLNNETLLKPNFKVSFESFWVESTHPWLASRCFDKNCIWIAKDDGIYLRNNPINVDELVHQWNKIA