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ClCG09G009368 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G009368
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionS-protein homolog
Genome locationCG_Chr09:8950874..8957785
RNA-Seq ExpressionClCG09G009368
SyntenyClCG09G009368
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026247.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]4.4e-2470.89Show/hide
Query:  MVSIKLRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFKK
        M+S +   VIVL L+    V+ARVLR+TLPPP+V+RYYIHV+NGLSNAD++VHCQSKDDDL YHHL N GDDYQWNFK+
Subjt:  MVSIKLRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFKK

XP_008458117.1 PREDICTED: uncharacterized protein LOC103497646 [Cucumis melo]5.4e-2281.67Show/hide
Query:  VEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFKK
        V+ARVLR+TLPPP+V+RYYIHV+NGLSNAD++VHCQSKDDDL YHHL N GDDYQWNFK+
Subjt:  VEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFKK

XP_022933269.1 S-protein homolog 1-like [Cucurbita moschata]4.2e-2271.23Show/hide
Query:  LRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFK
        ++ ++V +L T ALV A+V RV+LPPP  SRYYIHVVNGLS   ++VHCQSKDDDLEYHHL+NHGDDYQWNFK
Subjt:  LRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFK

XP_038896423.1 S-protein homolog 1-like [Benincasa hispida]1.5e-2477.03Show/hide
Query:  LRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFKK
        +R V+VLWL TAALV A++ R ++PPP  SRYY+HVVNGLSNADMVVHCQSKDDDL YHHLVN GDDYQWNFK+
Subjt:  LRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFKK

XP_038896433.1 S-protein homolog 1-like [Benincasa hispida]1.8e-2581.33Show/hide
Query:  IKLRKVIVLWLITAALVEA-RVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNF
        I+ R V+ LWLITAALV A ++LR+TLPPPAVSRYYIH+VNGLS  DMVVHCQSKDDDL YHHLVNHGDDYQWNF
Subjt:  IKLRKVIVLWLITAALVEA-RVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNF

TrEMBL top hitse value%identityAlignment
A0A1S3C8C8 S-protein homolog2.6e-2281.67Show/hide
Query:  VEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFKK
        V+ARVLR+TLPPP+V+RYYIHV+NGLSNAD++VHCQSKDDDL YHHL N GDDYQWNFK+
Subjt:  VEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFKK

A0A5A7SNG3 S-protein homolog2.1e-2470.89Show/hide
Query:  MVSIKLRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFKK
        M+S +   VIVL L+    V+ARVLR+TLPPP+V+RYYIHV+NGLSNAD++VHCQSKDDDL YHHL N GDDYQWNFK+
Subjt:  MVSIKLRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFKK

A0A6J1EYK7 S-protein homolog1.0e-2169.86Show/hide
Query:  LRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFK
        ++ ++V +L+T ALV A+V RV LPPP  SRYYIHVVNGLS   ++VHCQSKDDDL YHHL+NHGDDYQWNFK
Subjt:  LRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFK

A0A6J1EZA2 S-protein homolog2.0e-2271.23Show/hide
Query:  LRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFK
        ++ ++V +L T ALV A+V RV+LPPP  SRYYIHVVNGLS   ++VHCQSKDDDLEYHHL+NHGDDYQWNFK
Subjt:  LRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFK

A0A6J1F4F3 S-protein homolog1.7e-2169.86Show/hide
Query:  LRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFK
        ++ ++V +L T ALV A+V RV LPPP  SRYYIHVVNGLS   ++VHCQSKDDDL YHHL+NHGDDYQWNFK
Subjt:  LRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATCGATCAAGTTGAGGAAGGTGATAGTTTTGTGGCTCATCACAGCAGCTTTGGTCGAAGCTCGGGTTTTGAGGGTGACGTTACCTCCGCCGGCGGTTTCAAGGTA
TTATATTCACGTGGTAAACGGGCTAAGCAACGCCGATATGGTTGTGCACTGCCAATCGAAGGACGATGATTTGGAGTATCACCATTTAGTTAACCATGGAGATGATTACC
AATGGAATTTTAAGAAATGTGGGACGGTAGTGAATGGTCGAGTTCCTCTGCTTTGTTCTTCGTCGGGGAAATGGAATGTGCTTAGGGATCTGAAGGGAGTTAGGAATTTG
GGGGGAACGAAAACCCTAAAGTCGTGGAAGAGTTCAGGGTCGTTGTACGGTTTGGTGATGCAGAGGAAGACGACGACCGCCGATCTCCCTCCATCGGAGAAGAGCTTTAA
GGTTTCTAGGGGATCTTCGGACATGGAAAGTATGAGTTTGACGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATCGATCAAGTTGAGGAAGGTGATAGTTTTGTGGCTCATCACAGCAGCTTTGGTCGAAGCTCGGGTTTTGAGGGTGACGTTACCTCCGCCGGCGGTTTCAAGGTA
TTATATTCACGTGGTAAACGGGCTAAGCAACGCCGATATGGTTGTGCACTGCCAATCGAAGGACGATGATTTGGAGTATCACCATTTAGTTAACCATGGAGATGATTACC
AATGGAATTTTAAGAAATGTGGGACGGTAGTGAATGGTCGAGTTCCTCTGCTTTGTTCTTCGTCGGGGAAATGGAATGTGCTTAGGGATCTGAAGGGAGTTAGGAATTTG
GGGGGAACGAAAACCCTAAAGTCGTGGAAGAGTTCAGGGTCGTTGTACGGTTTGGTGATGCAGAGGAAGACGACGACCGCCGATCTCCCTCCATCGGAGAAGAGCTTTAA
GGTTTCTAGGGGATCTTCGGACATGGAAAGTATGAGTTTGACGATATGA
Protein sequenceShow/hide protein sequence
MVSIKLRKVIVLWLITAALVEARVLRVTLPPPAVSRYYIHVVNGLSNADMVVHCQSKDDDLEYHHLVNHGDDYQWNFKKCGTVVNGRVPLLCSSSGKWNVLRDLKGVRNL
GGTKTLKSWKSSGSLYGLVMQRKTTTADLPPSEKSFKVSRGSSDMESMSLTI