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ClCG09G011940 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G011940
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionMicrospore-specific promoter 2, putative
Genome locationCG_Chr09:12699142..12699478
RNA-Seq ExpressionClCG09G011940
SyntenyClCG09G011940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606250.1 hypothetical protein SDJN03_03567, partial [Cucurbita argyrosperma subsp. sororia]9.7e-1771.05Show/hide
Query:  MEDDNAKLFHHPQH--SSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLL
        MED    L HHPQH  SSSSMTLFSRLD++D VMK LEKK RLER G      G+E++CISLDVALKDTYFKGSLL
Subjt:  MEDDNAKLFHHPQH--SSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLL
XP_008465972.1 PREDICTED: uncharacterized protein LOC103503541 [Cucumis melo]7.0e-2384.21Show/hide
Query:  DDNAKLFHHPQH---SSSSMTLFSRLDHLDFVMKDLEKKHRLER-FGGSNLEEGMERRCISLDVALKDTYFKGSLL
        DDN KLFH PQ    SSSSMTLFSRLDHLDFVMKDLEKK RLER FGGSNLEEGM  R IS+DVALKDTYFKGSLL
Subjt:  DDNAKLFHHPQH---SSSSMTLFSRLDHLDFVMKDLEKKHRLER-FGGSNLEEGMERRCISLDVALKDTYFKGSLL
XP_011652652.1 uncharacterized protein LOC105435041 isoform X2 [Cucumis sativus]6.5e-2179.22Show/hide
Query:  EDDNAKLFHHPQH---SSSSMTLFSRLDHLDFVMKDLEKKHRLER-FGGSNLEEGMERRCISLDVALKDTYFKGSLL
        +DDN KLF HPQ    SSSSMTLFSRLDHLDFVMK+LEKK RLER FG SNLEEGM  R IS+DVALKDTY KGSLL
Subjt:  EDDNAKLFHHPQH---SSSSMTLFSRLDHLDFVMKDLEKKHRLER-FGGSNLEEGMERRCISLDVALKDTYFKGSLL
XP_031737938.1 uncharacterized protein LOC105435041 isoform X1 [Cucumis sativus]6.5e-2179.22Show/hide
Query:  EDDNAKLFHHPQH---SSSSMTLFSRLDHLDFVMKDLEKKHRLER-FGGSNLEEGMERRCISLDVALKDTYFKGSLL
        +DDN KLF HPQ    SSSSMTLFSRLDHLDFVMK+LEKK RLER FG SNLEEGM  R IS+DVALKDTY KGSLL
Subjt:  EDDNAKLFHHPQH---SSSSMTLFSRLDHLDFVMKDLEKKHRLER-FGGSNLEEGMERRCISLDVALKDTYFKGSLL
XP_038888525.1 uncharacterized protein LOC120078343 [Benincasa hispida]4.7e-2786.84Show/hide
Query:  EDDNAKLFHHPQH---SSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLL
        +D+ AKL HHPQH   SSSSMTLFSRLDHLDFVMKDLEKK RL RFGGSNLEEGME+RCISLDVALKDTYFKGSLL
Subjt:  EDDNAKLFHHPQH---SSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLL
TrEMBL top hitse value%identityAlignment
A0A0A0LEC6 Uncharacterized protein3.2e-2179.22Show/hide
Query:  EDDNAKLFHHPQH---SSSSMTLFSRLDHLDFVMKDLEKKHRLER-FGGSNLEEGMERRCISLDVALKDTYFKGSLL
        +DDN KLF HPQ    SSSSMTLFSRLDHLDFVMK+LEKK RLER FG SNLEEGM  R IS+DVALKDTY KGSLL
Subjt:  EDDNAKLFHHPQH---SSSSMTLFSRLDHLDFVMKDLEKKHRLER-FGGSNLEEGMERRCISLDVALKDTYFKGSLL
A0A1S3CRK1 uncharacterized protein LOC1035035413.4e-2384.21Show/hide
Query:  DDNAKLFHHPQH---SSSSMTLFSRLDHLDFVMKDLEKKHRLER-FGGSNLEEGMERRCISLDVALKDTYFKGSLL
        DDN KLFH PQ    SSSSMTLFSRLDHLDFVMKDLEKK RLER FGGSNLEEGM  R IS+DVALKDTYFKGSLL
Subjt:  DDNAKLFHHPQH---SSSSMTLFSRLDHLDFVMKDLEKKHRLER-FGGSNLEEGMERRCISLDVALKDTYFKGSLL
A0A6J1DZI5 uncharacterized protein LOC1110260524.4e-1569.33Show/hide
Query:  MEDDNAKLFHHPQH-SSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLL
        MEDD AKL H PQH SSSSMTL SRLDHLDFVMK LE+K            + +ERRC+SLDVALKDTYFKGSLL
Subjt:  MEDDNAKLFHHPQH-SSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLL
A0A6J1ES90 uncharacterized protein LOC1114372644.7e-1771.05Show/hide
Query:  MEDDNAKLFHHPQH--SSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLL
        MED    L HHPQH  SSSSMTLFSRLD++D VMK LEKK RLER G      G+E++CISLDVALKDTYFKGSLL
Subjt:  MEDDNAKLFHHPQH--SSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLL
A0A6J1K4A8 uncharacterized protein LOC1114915601.4e-1672Show/hide
Query:  DDNAKLF-HHPQH--SSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLL
        +D AKL  HHPQH  SSSSMTLFSRLD++D VMK LEKK RLER G      G+E++CISLDVALKDTYFKGSLL
Subjt:  DDNAKLF-HHPQH--SSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G46795.1 microspore-specific promoter 25.7e-0741.94Show/hide
Query:  QHSSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLL
        +HS SS+ + SRL+HLDFV+K+LE++  L ++   +      R  I    A+++ YFKGSLL
Subjt:  QHSSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGATAATGCAAAGTTATTCCATCATCCACAACATTCCTCTTCCTCAATGACCCTTTTTTCTAGATTGGATCATTTGGATTTTGTTATGAAGGACTTG
GAGAAAAAACATAGATTGGAAAGATTTGGAGGCAGTAATTTAGAAGAAGGAATGGAAAGAAGATGCATATCATTGGATGTTGCACTAAAAGATACTTACTTTAAA
GGTTCATTGTTGGNCGTGTCATTAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGATAATGCAAAGTTATTCCATCATCCACAACATTCCTCTTCCTCAATGACCCTTTTTTCTAGATTGGATCATTTGGATTTTGTTATGAAGGACTTG
GAGAAAAAACATAGATTGGAAAGATTTGGAGGCAGTAATTTAGAAGAAGGAATGGAAAGAAGATGCATATCATTGGATGTTGCACTAAAAGATACTTACTTTAAA
GGTTCATTGTTGGNCGTGTCATTAAACTAA
Protein sequenceShow/hide protein sequence
MEDDNAKLFHHPQHSSSSMTLFSRLDHLDFVMKDLEKKHRLERFGGSNLEEGMERRCISLDVALKDTYFKGSLLXVSLN