CuGenDBv2

Gene ID	ClCG09G012360
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	MSC domain-containing protein
Genome location	CG_Chr09:14065859..14070291
RNA-Seq Expression	ClCG09G012360
Synteny	ClCG09G012360
Gene Ontology terms	GO:0005637 - nuclear inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003682 - chromatin binding (molecular function)
InterPro domains	IPR018996 - Man1/Src1, C-terminal IPR041885 - MAN1, winged-helix domain IPR044780 - Heh2/Src1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0038534.1 MSC domain-containing protein [Cucumis melo var. makuwa]

3.2e-196

85.22

Show/hide

Query:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN
        MSSTPKKRTK KRNPNSDVGSG DSS  SS++LLKS+KEPPRDFFPSKDDLAAL+TVL IA LVFVSCNFFVSRLSSRHP PFCDTDADSLDLLS     
Subjt:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN

Query:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL
                VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKL EWLESHLCE+NAKFLCDGIGIVWVKE +IWDDLDGKEL+ESIGSDNTTL
Subjt:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL

Query:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS
        +YAKSK LETIGGL  TRQNS GIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYNQVCEILEENAL S
Subjt:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS

Query:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR------PASQSSFRKPMGVNSDQMY
         RNS Q ESWVVASRLRDHLLLPRERKN  LW+KVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK+K+       AS+S+F K +GVN D MY
Subjt:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR------PASQSSFRKPMGVNSDQMY

Query:  RNIENG
          IENG
Subjt:  RNIENG

XP_004148518.1 uncharacterized protein LOC101208017 isoform X1 [Cucumis sativus]

2.1e-195

84.35

Show/hide

Query:  MSSTPKKRTKFKRNPNSDVGSGG----DSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSV
        MSSTPKKRTK KRNPNSDVGSG     DSS  SS++LLKSIKEPPRDFFPSKDDLAAL+TVL IAC VFVSCNFFVSRLSSRHP PFCDTDADS D +S 
Subjt:  MSSTPKKRTKFKRNPNSDVGSGG----DSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSV

Query:  ANNNFQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSD
                    VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKL EWLESHLCEANAKFLCDGIGIVWVKE +IWDDLDGKEL+ESIGSD
Subjt:  ANNNFQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSD

Query:  NTTLIYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEEN
        NTTL+YAKSK LETIGGL  TRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEEN
Subjt:  NTTLIYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEEN

Query:  ALMSMRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR------PASQSSFRKPMGVNS
        AL S RNSGQ ESWVVASRLRDHLLLPRER+N  LW+KVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSS +K+       AS+S+F K +GVN 
Subjt:  ALMSMRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR------PASQSSFRKPMGVNS

Query:  DQMYRNIEN
        D MY  IEN
Subjt:  DQMYRNIEN

XP_008465930.1 PREDICTED: uncharacterized protein LOC103503505 isoform X3 [Cucumis melo]

1.6e-195

85.19

Show/hide

Query:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN
        MSSTPKKRTK KRNPNSDVGSG DSS  SS++LLKS+KEPPRDFFPSKDDLAAL+TVL IA LVFVSCNFFVSRLSSRHP PFCDTDADSLDLLS     
Subjt:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN

Query:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL
                VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKL EWLESHLCE+NAKFLCDGIGIVWVKE +IWDDLDGKEL+ESIGSDNTTL
Subjt:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL

Query:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS
        +YAKSK LETIGGL  TRQNS GIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYNQVCEILEENAL S
Subjt:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS

Query:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR------PASQSSFRKPMGVNSDQMY
         RNS Q ESWVVASRLRDHLLLPRERKN  LW+KVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK+K+       AS+S+F K +GVN D MY
Subjt:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR------PASQSSFRKPMGVNSDQMY

Query:  RNIEN
          IEN
Subjt:  RNIEN

XP_011652669.1 uncharacterized protein LOC101208017 isoform X2 [Cucumis sativus]

4.3e-185

87.74

Show/hide

Query:  MSSTPKKRTKFKRNPNSDVGSGG----DSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSV
        MSSTPKKRTK KRNPNSDVGSG     DSS  SS++LLKSIKEPPRDFFPSKDDLAAL+TVL IAC VFVSCNFFVSRLSSRHP PFCDTDADS D +S 
Subjt:  MSSTPKKRTKFKRNPNSDVGSGG----DSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSV

Query:  ANNNFQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSD
                    VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKL EWLESHLCEANAKFLCDGIGIVWVKE +IWDDLDGKEL+ESIGSD
Subjt:  ANNNFQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSD

Query:  NTTLIYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEEN
        NTTL+YAKSK LETIGGL  TRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEEN
Subjt:  NTTLIYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEEN

Query:  ALMSMRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ
        AL S RNSGQ ESWVVASRLRDHLLLPRER+N  LW+KVEELVQEDSRIDRYPRLVKGDGKEVWEWQ
Subjt:  ALMSMRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ

XP_038888162.1 uncharacterized protein LOC120078048 [Benincasa hispida]

2.1e-200

87.22

Show/hide

Query:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN
        MSSTPKKRTK KRN NSDVGS GDSS  SST+LLKSIKEPPRDFFPSKDDLAAL+TVLFIACL+FVSC+FFVSRL+SR PRPFCDTDADSLDLLS     
Subjt:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN

Query:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL
                VCEPCPRHGECRDGKL+CLHGYRKHGRLCIEDGVINEAVNKL EWLESHLCEANAKFLCDGIGIVWVKE +IWDDLDGKEL+ESIGSDNTTL
Subjt:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL

Query:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS
         YAKSK LETIGGLF TRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAF VLPVFLLLVGCTWLLWKLYRRQY+TNRAEDLYNQVCEILEENALMS
Subjt:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS

Query:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRPASQSSFRKPMGVNSDQMYRNIEN
         RNSGQ ESWVVASRLRDHLLLPRERKN  LWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR A++S+  K MGV++DQM+  +EN
Subjt:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRPASQSSFRKPMGVNSDQMYRNIEN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LI89 MSC domain-containing protein

1.0e-195

84.35

Show/hide

Query:  MSSTPKKRTKFKRNPNSDVGSGG----DSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSV
        MSSTPKKRTK KRNPNSDVGSG     DSS  SS++LLKSIKEPPRDFFPSKDDLAAL+TVL IAC VFVSCNFFVSRLSSRHP PFCDTDADS D +S 
Subjt:  MSSTPKKRTKFKRNPNSDVGSGG----DSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSV

Query:  ANNNFQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSD
                    VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKL EWLESHLCEANAKFLCDGIGIVWVKE +IWDDLDGKEL+ESIGSD
Subjt:  ANNNFQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSD

Query:  NTTLIYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEEN
        NTTL+YAKSK LETIGGL  TRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEEN
Subjt:  NTTLIYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEEN

Query:  ALMSMRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR------PASQSSFRKPMGVNS
        AL S RNSGQ ESWVVASRLRDHLLLPRER+N  LW+KVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSS +K+       AS+S+F K +GVN 
Subjt:  ALMSMRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR------PASQSSFRKPMGVNS

Query:  DQMYRNIEN
        D MY  IEN
Subjt:  DQMYRNIEN

A0A1S3CQ15 uncharacterized protein LOC103503505 isoform X3

7.7e-196

85.19

Show/hide

Query:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN
        MSSTPKKRTK KRNPNSDVGSG DSS  SS++LLKS+KEPPRDFFPSKDDLAAL+TVL IA LVFVSCNFFVSRLSSRHP PFCDTDADSLDLLS     
Subjt:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN

Query:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL
                VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKL EWLESHLCE+NAKFLCDGIGIVWVKE +IWDDLDGKEL+ESIGSDNTTL
Subjt:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL

Query:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS
        +YAKSK LETIGGL  TRQNS GIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYNQVCEILEENAL S
Subjt:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS

Query:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR------PASQSSFRKPMGVNSDQMY
         RNS Q ESWVVASRLRDHLLLPRERKN  LW+KVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK+K+       AS+S+F K +GVN D MY
Subjt:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR------PASQSSFRKPMGVNSDQMY

Query:  RNIEN
          IEN
Subjt:  RNIEN

A0A1S3CRG1 uncharacterized protein LOC103503505 isoform X1

2.7e-185

88.22

Show/hide

Query:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN
        MSSTPKKRTK KRNPNSDVGSG DSS  SS++LLKS+KEPPRDFFPSKDDLAAL+TVL IA LVFVSCNFFVSRLSSRHP PFCDTDADSLDLLS     
Subjt:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN

Query:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL
                VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKL EWLESHLCE+NAKFLCDGIGIVWVKE +IWDDLDGKEL+ESIGSDNTTL
Subjt:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL

Query:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS
        +YAKSK LETIGGL  TRQNS GIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYNQVCEILEENAL S
Subjt:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS

Query:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVE
         RNS Q ESWVVASRLRDHLLLPRERKN  LW+KVEELVQEDSRIDRYPRLVKGDGKEVWEWQ E
Subjt:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVE

A0A1S4E5Q9 uncharacterized protein LOC103503505 isoform X4

8.0e-185

88.43

Show/hide

Query:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN
        MSSTPKKRTK KRNPNSDVGSG DSS  SS++LLKS+KEPPRDFFPSKDDLAAL+TVL IA LVFVSCNFFVSRLSSRHP PFCDTDADSLDLLS     
Subjt:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN

Query:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL
                VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKL EWLESHLCE+NAKFLCDGIGIVWVKE +IWDDLDGKEL+ESIGSDNTTL
Subjt:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL

Query:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS
        +YAKSK LETIGGL  TRQNS GIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYNQVCEILEENAL S
Subjt:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS

Query:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ
         RNS Q ESWVVASRLRDHLLLPRERKN  LW+KVEELVQEDSRIDRYPRLVKGDGKEVWEWQ
Subjt:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ

A0A5A7T509 MSC domain-containing protein

1.5e-196

85.22

Show/hide

Query:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN
        MSSTPKKRTK KRNPNSDVGSG DSS  SS++LLKS+KEPPRDFFPSKDDLAAL+TVL IA LVFVSCNFFVSRLSSRHP PFCDTDADSLDLLS     
Subjt:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN

Query:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL
                VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKL EWLESHLCE+NAKFLCDGIGIVWVKE +IWDDLDGKEL+ESIGSDNTTL
Subjt:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL

Query:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS
        +YAKSK LETIGGL  TRQNS GIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYNQVCEILEENAL S
Subjt:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS

Query:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR------PASQSSFRKPMGVNSDQMY
         RNS Q ESWVVASRLRDHLLLPRERKN  LW+KVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK+K+       AS+S+F K +GVN D MY
Subjt:  MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR------PASQSSFRKPMGVNSDQMY

Query:  RNIENG
          IENG
Subjt:  RNIENG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G46560.1 CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

6.2e-89

42.86

Show/hide

Query:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN
        M S P+KR      P S+  +G    + SS+  ++S+ EPP+  FPSK +   LL VL +AC V  +CNF    LSS   + FCD++ + +D        
Subjt:  MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNN

Query:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL
                +CEPCP +GEC  GKL+C  GY+    LC+EDG INE+  KLV + E  +CE+ A   C G G +WV E ++W +L     + ++  D +  
Subjt:  FQSLEMTHVCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTL

Query:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS
         + K K +E +  L   R NS GI ELKCP+ +A+SYKP TCR+  W+L+H  ++     +LVG   L  ++ R+Q  + R E+LY+QVC+ LEENA+ S
Subjt:  IYAKSKVLETIGGLFHTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMS

Query:  -MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK-EKRPASQSSFRKPMGVNSD-QMYRN
            +   E WV+AS LRD+LLLPRER++  LW KVEEL++EDSRIDRY +L+KG+ K VWEWQVEGSLS SK +K+  +Q   RK +  ++  Q Y N
Subjt:  -MRNSGQSESWVVASRLRDHLLLPRERKNLFLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK-EKRPASQSSFRKPMGVNSD-QMYRN

Sequences

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CDS sequence

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ATGTCTTCAACTCCGAAGAAGCGAACGAAATTCAAGCGTAATCCGAACTCCGATGTCGGTTCTGGAGGCGATTCCTCTGCTCCATCTTCTACAGTGTTGCTGAAGTCTAT
CAAGGAACCGCCTCGCGATTTCTTCCCCTCGAAGGATGATCTTGCTGCGCTACTTACTGTACTTTTCATCGCCTGCTTGGTTTTTGTGAGTTGTAACTTCTTCGTATCTA
GACTTTCAAGTCGCCACCCGAGGCCTTTCTGTGATACCGACGCCGATTCTCTGGATTTGCTTTCTGTTGCCAACAATAATTTCCAGTCGCTTGAAATGACTCATGTTTGT
GAGCCTTGTCCAAGGCATGGAGAATGTCGTGATGGTAAGTTGGAATGCCTTCATGGTTATAGAAAGCATGGAAGGTTATGTATAGAAGATGGAGTAATCAATGAAGCAGT
TAATAAACTTGTAGAATGGCTAGAATCTCACCTCTGTGAAGCAAATGCCAAGTTCTTATGCGATGGAATTGGGATAGTTTGGGTTAAAGAGGGCAATATATGGGATGATC
TAGATGGTAAAGAGCTGATGGAAAGTATTGGCTCTGACAACACCACTCTTATTTATGCAAAGAGCAAGGTGTTGGAAACTATTGGTGGGTTATTTCATACACGACAAAAT
TCTCTTGGGATCAAGGAATTGAAATGCCCAGACCTGCTAGCTGAAAGTTACAAGCCTTTTACTTGCCGTATTCGTCACTGGGTTTTGCAGCATGCTTTTGTTGTTTTGCC
AGTTTTCTTACTGCTTGTGGGATGCACATGGTTACTATGGAAACTTTACCGAAGACAATATCTAACAAATAGAGCTGAAGATCTGTACAACCAGGTTTGTGAAATACTTG
AGGAAAATGCTTTGATGTCAATGAGAAACAGTGGTCAATCTGAATCATGGGTTGTTGCTTCTAGGTTACGTGACCATCTTCTTTTGCCACGAGAGAGGAAGAATCTTTTC
TTATGGAGGAAGGTAGAGGAGTTGGTTCAGGAAGACTCACGAATAGATCGTTACCCGAGACTAGTTAAGGGTGATGGAAAAGAAGTATGGGAATGGCAAGTAGAAGGATC
TTTGAGCTCTTCAAAGGAAAAGAGACCGGCCAGCCAATCCAGCTTCAGGAAGCCAATGGGAGTAAATTCTGACCAAATGTATCGTAACATAGAGAACGGTGGATACTGTA
GATTAGCTGGTTGA

mRNA sequence

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Protein sequence

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MSSTPKKRTKFKRNPNSDVGSGGDSSAPSSTVLLKSIKEPPRDFFPSKDDLAALLTVLFIACLVFVSCNFFVSRLSSRHPRPFCDTDADSLDLLSVANNNFQSLEMTHVC
EPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLVEWLESHLCEANAKFLCDGIGIVWVKEGNIWDDLDGKELMESIGSDNTTLIYAKSKVLETIGGLFHTRQN
SLGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNQVCEILEENALMSMRNSGQSESWVVASRLRDHLLLPRERKNLF
LWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRPASQSSFRKPMGVNSDQMYRNIENGGYCRLAG

ClCG09G012360 (gene) of Watermelon (Charleston Gray) v2.5 genome