; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G013034 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G013034
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionGag-pro-like protein
Genome locationCG_Chr09:17250718..17251824
RNA-Seq ExpressionClCG09G013034
SyntenyClCG09G013034
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025178.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]8.2e-1334.58Show/hide
Query:  MKKKNKRLLRDVDVLLHNEAETQKKYIKELQQELERMNKVVANFQSALEEQAASSQKIVAEVENLQNSAKEYKSQLTEVVTNDYAQLKKEYQEMSADFAG
        ++KKNKRLLR++   LH E E +K  I +L+ E+ER+N V   FQ+AL EQA SSQ+   E+E                                     
Subjt:  MKKKNKRLLRDVDVLLHNEAETQKKYIKELQQELERMNKVVANFQSALEEQAASSQKIVAEVENLQNSAKEYKSQLTEVVTNDYAQLKKEYQEMSADFAG

Query:  SLGNTLGVLGGSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTP
                                                   VQAVRQD+E LK+QL KILEL+T GRGK+V E SSQVE+ LNQ LE     P   TP
Subjt:  SLGNTLGVLGGSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTP

Query:  SQIIVLNPRGDVRT
         +    NPR   RT
Subjt:  SQIIVLNPRGDVRT

KAA0049672.1 uncharacterized protein E6C27_scaffold76G00070 [Cucumis melo var. makuwa]2.3e-1539.11Show/hide
Query:  MKKKNKRLLRDVDVLLHNEAETQKKYIKELQQELERMNKVVANFQSALEEQAASSQKIVAEVENLQNSAKEYKSQLTEVVTNDYAQLKKEYQEMSADFAG
        ++KKNKRLLR++   LH E E +K  I     E+E +   +  ++S   E A S  + + +V N   S      +  EVVT+DYAQL ++YQEM  DF  
Subjt:  MKKKNKRLLRDVDVLLHNEAETQKKYIKELQQELERMNKVVANFQSALEEQAASSQKIVAEVENLQNSAKEYKSQLTEVVTNDYAQLKKEYQEMSADFAG

Query:  SLGNTLGVLGGSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTP
               ++   ++  +            RRK    DD +      V QDVE LK+QLTKILEL+T GRGK+VV  SSQVE+ LNQ LE  H  P+  TP
Subjt:  SLGNTLGVLGGSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTP

Query:  SQ
         +
Subjt:  SQ

KAA0059732.1 Gag-pro-like protein [Cucumis melo var. makuwa]1.0e-2657.6Show/hide
Query:  EVVTNDYAQLKKEYQEMSADFAGSLGNTLGVLGGSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEAS
        +VVTNDYAQL ++YQEMS DF         +      T   + SPP HPYWTRRKARIMD++ NDQVQAV QDVE LK+QLTKILEL+T GRGK++V  S
Subjt:  EVVTNDYAQLKKEYQEMSADFAGSLGNTLGVLGGSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEAS

Query:  SQVEIGLNQTLEVSHLIPTCHTPSQ
        SQVE+ L Q LE     P+  TP +
Subjt:  SQVEIGLNQTLEVSHLIPTCHTPSQ

KAA0060308.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]1.0e-2368.13Show/hide
Query:  SKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTPSQ
        +K  KIA+ SPP HPYWTRRKARIMD+Q NDQVQAVRQDVE LK+QL KILEL+T GRGK+VV  SSQVE+ LNQ LE     P   TP +
Subjt:  SKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTPSQ

TYK10943.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.2e-2164.77Show/hide
Query:  KIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTPSQI
        KIA+ SPP HPYWTRRKA+I+D+Q ND VQAVRQ VE LK+QLTKILEL+T GRGK V   SSQVE+ LNQ LE     P+  TP ++
Subjt:  KIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTPSQI

TrEMBL top hitse value%identityAlignment
A0A5A7SGB8 Glial fibrillary acidic protein-like4.0e-1334.58Show/hide
Query:  MKKKNKRLLRDVDVLLHNEAETQKKYIKELQQELERMNKVVANFQSALEEQAASSQKIVAEVENLQNSAKEYKSQLTEVVTNDYAQLKKEYQEMSADFAG
        ++KKNKRLLR++   LH E E +K  I +L+ E+ER+N V   FQ+AL EQA SSQ+   E+E                                     
Subjt:  MKKKNKRLLRDVDVLLHNEAETQKKYIKELQQELERMNKVVANFQSALEEQAASSQKIVAEVENLQNSAKEYKSQLTEVVTNDYAQLKKEYQEMSADFAG

Query:  SLGNTLGVLGGSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTP
                                                   VQAVRQD+E LK+QL KILEL+T GRGK+V E SSQVE+ LNQ LE     P   TP
Subjt:  SLGNTLGVLGGSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTP

Query:  SQIIVLNPRGDVRT
         +    NPR   RT
Subjt:  SQIIVLNPRGDVRT

A0A5A7U1L8 Retrotrans_gag domain-containing protein1.1e-1539.11Show/hide
Query:  MKKKNKRLLRDVDVLLHNEAETQKKYIKELQQELERMNKVVANFQSALEEQAASSQKIVAEVENLQNSAKEYKSQLTEVVTNDYAQLKKEYQEMSADFAG
        ++KKNKRLLR++   LH E E +K  I     E+E +   +  ++S   E A S  + + +V N   S      +  EVVT+DYAQL ++YQEM  DF  
Subjt:  MKKKNKRLLRDVDVLLHNEAETQKKYIKELQQELERMNKVVANFQSALEEQAASSQKIVAEVENLQNSAKEYKSQLTEVVTNDYAQLKKEYQEMSADFAG

Query:  SLGNTLGVLGGSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTP
               ++   ++  +            RRK    DD +      V QDVE LK+QLTKILEL+T GRGK+VV  SSQVE+ LNQ LE  H  P+  TP
Subjt:  SLGNTLGVLGGSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTP

Query:  SQ
         +
Subjt:  SQ

A0A5A7UUY2 Gag-pro-like protein4.9e-2757.6Show/hide
Query:  EVVTNDYAQLKKEYQEMSADFAGSLGNTLGVLGGSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEAS
        +VVTNDYAQL ++YQEMS DF         +      T   + SPP HPYWTRRKARIMD++ NDQVQAV QDVE LK+QLTKILEL+T GRGK++V  S
Subjt:  EVVTNDYAQLKKEYQEMSADFAGSLGNTLGVLGGSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEAS

Query:  SQVEIGLNQTLEVSHLIPTCHTPSQ
        SQVE+ L Q LE     P+  TP +
Subjt:  SQVEIGLNQTLEVSHLIPTCHTPSQ

A0A5D3CGB5 Glial fibrillary acidic protein-like1.0e-2164.77Show/hide
Query:  KIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTPSQI
        KIA+ SPP HPYWTRRKA+I+D+Q ND VQAVRQ VE LK+QLTKILEL+T GRGK V   SSQVE+ LNQ LE     P+  TP ++
Subjt:  KIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTPSQI

A0A5D3DEF4 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein5.0e-2468.13Show/hide
Query:  SKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTPSQ
        +K  KIA+ SPP HPYWTRRKARIMD+Q NDQVQAVRQDVE LK+QL KILEL+T GRGK+VV  SSQVE+ LNQ LE     P   TP +
Subjt:  SKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTPSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGAAGAATAAGAGATTACTAAGAGATGTTGATGTTTTGCTGCACAATGAGGCGGAAACACAAAAGAAGTACATCAAAGAGTTACAACAAGAGTTGGAGAGAAT
GAACAAGGTTGTTGCAAATTTTCAAAGCGCCTTAGAAGAGCAAGCCGCATCATCCCAAAAGATTGTTGCAGAGGTTGAGAATCTACAAAATTCAGCCAAAGAATATAAAT
CCCAGCTTACTGAGGTGGTGACAAACGACTATGCTCAGCTGAAGAAAGAATATCAGGAAATGTCAGCAGATTTTGCGGGATCATTAGGCAATACCTTGGGCGTTTTGGGT
GGTTCAAAGTTTACAAAAATAGCTCGAAGTTCTCCTCCTCACCATCCCTACTGGACAAGACGAAAGGCAAGAATAATGGATGATCAAGTTAATGATCAGGTTCAGGCAGT
GCGTCAGGACGTGGAAGAGTTGAAGGAGCAGTTAACAAAAATTCTAGAATTAATCACCGCTGGAAGAGGAAAGAATGTTGTGGAAGCTTCGTCACAAGTTGAAATTGGTC
TGAATCAGACATTAGAAGTGTCACACCTAATACCAACTTGTCACACCCCCTCCCAGATTATCGTGCTCAACCCAAGAGGAGATGTGAGGACAGTAAACATCACCCCTTTT
ATGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAGAAGAATAAGAGATTACTAAGAGATGTTGATGTTTTGCTGCACAATGAGGCGGAAACACAAAAGAAGTACATCAAAGAGTTACAACAAGAGTTGGAGAGAAT
GAACAAGGTTGTTGCAAATTTTCAAAGCGCCTTAGAAGAGCAAGCCGCATCATCCCAAAAGATTGTTGCAGAGGTTGAGAATCTACAAAATTCAGCCAAAGAATATAAAT
CCCAGCTTACTGAGGTGGTGACAAACGACTATGCTCAGCTGAAGAAAGAATATCAGGAAATGTCAGCAGATTTTGCGGGATCATTAGGCAATACCTTGGGCGTTTTGGGT
GGTTCAAAGTTTACAAAAATAGCTCGAAGTTCTCCTCCTCACCATCCCTACTGGACAAGACGAAAGGCAAGAATAATGGATGATCAAGTTAATGATCAGGTTCAGGCAGT
GCGTCAGGACGTGGAAGAGTTGAAGGAGCAGTTAACAAAAATTCTAGAATTAATCACCGCTGGAAGAGGAAAGAATGTTGTGGAAGCTTCGTCACAAGTTGAAATTGGTC
TGAATCAGACATTAGAAGTGTCACACCTAATACCAACTTGTCACACCCCCTCCCAGATTATCGTGCTCAACCCAAGAGGAGATGTGAGGACAGTAAACATCACCCCTTTT
ATGACATAA
Protein sequenceShow/hide protein sequence
MKKKNKRLLRDVDVLLHNEAETQKKYIKELQQELERMNKVVANFQSALEEQAASSQKIVAEVENLQNSAKEYKSQLTEVVTNDYAQLKKEYQEMSADFAGSLGNTLGVLG
GSKFTKIARSSPPHHPYWTRRKARIMDDQVNDQVQAVRQDVEELKEQLTKILELITAGRGKNVVEASSQVEIGLNQTLEVSHLIPTCHTPSQIIVLNPRGDVRTVNITPF
MT