CuGenDBv2

Gene ID	ClCG09G013110
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	NERD domain-containing protein
Genome location	CG_Chr09:17760820..17796553
RNA-Seq Expression	ClCG09G013110
Synteny	ClCG09G013110
Gene Ontology terms	NA
InterPro domains	IPR011528 - Nuclease-related domain, NERD

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605718.1 hypothetical protein SDJN03_03035, partial [Cucurbita argyrosperma subsp. sororia]

4.5e-153

84.16

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Query:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        M+ EILCGF+AFR+LRRFF  RDE+EIET DSNALFA ASRLEK+Y GK F+GLRIPDADTGLRQSIDMVLVTKGEAVV+ VKNLSGFVS+SADGSWICE
Subjt:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD
        GDGRQ SEI+PDPVAETRRW SILESY E+RGV LPEGYLSWKVL+PNPKFR VHSNYFPSEVITY+QW+ LKPEPKSMF GWIKSA RGG KE+QES D
Subjt:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD

Query:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ
        +KL+FVLNTAPMWDRLELKGNN+VLGEFLEFKGKKEDMQALREIKRSKVSCI+IQK+R +GF  SR+RVLYSTR+Y+N+G SASEWKE+T+GS++MVVFQ
Subjt:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ

Query:  MEYSSKVRKISISSIVSLSLSA
        MEYSSKVRKI ISSIVSLSLSA
Subjt:  MEYSSKVRKISISSIVSLSLSA

KAG7035626.1 hypothetical protein SDJN02_02424 [Cucurbita argyrosperma subsp. argyrosperma]

4.5e-153

84.47

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Query:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        M+ EILCGF+AFR+LRRFF  RDE+EIET DSNALFA ASRLEK+Y GK F+GLRIPDADTGLRQSIDMVLVTKGEAVV+ VKNLSGFVS+SADGSWICE
Subjt:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD
        GDGRQ SEI+PDPVAETRRW SILESY E+RGV LPEGYLSWKVL+PNPKFR VHSNYFPSEVITY+QW+ LKPEPKSMF GWIKSA RGG KE+QES D
Subjt:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD

Query:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ
        +KL+FVLNTAPMWDRLELKGNN+VLGEFLEFKGKKEDMQALREIKRSKVSCI+IQK+R IGF  SR+RVLYSTR+Y+N+G SASEWKE+T+GS+ MVVFQ
Subjt:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ

Query:  MEYSSKVRKISISSIVSLSLSA
        MEYSSKVRKI ISSIVSLSLSA
Subjt:  MEYSSKVRKISISSIVSLSLSA

XP_004148346.1 uncharacterized protein LOC101206635 isoform X1 [Cucumis sativus]

8.5e-168

92.24

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Query:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MWAEILCGFLAFRVLRRFFFPRDEMEIETIDS+ALFA ASRLEKLYGGKAF+GLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
Subjt:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD
        GDGRQ SEI+PDPVAETRRWVSILESYFEQRGV LPEGYLSWKVL+PNPKFR +HSNYFPSEVI Y+QWIHLKPEPKSMF GWIKSAW GG KEMQ+SMD
Subjt:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD

Query:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ
        QKL+FVLNTAPMWDRLEL GNNIVLGEFLEFK KKEDMQALREI+RSKVSCILIQKIRRIGFV SR RVLYSTRDYRN+GASASEWKEVTVGSS+MVVFQ
Subjt:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ

Query:  MEYSSKVRKISISSIVSLSLSA
        MEYSSKVRK+ ISSIVSLSLSA
Subjt:  MEYSSKVRKISISSIVSLSLSA

XP_022957721.1 uncharacterized protein LOC111459180 [Cucurbita moschata]

1.5e-153

84.47

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Query:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        M+ EILCGF+AFR+LRRFF  RDE+EIET DSNALFA ASRLEK+Y GK F+GLRIPDADTGLRQSIDMVLVTKGEAVV+ VKNLSGFVS+SADGSWICE
Subjt:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD
        GDGRQ SEI+PDPVAETRRW SILESY E+RGV LPEGYLSWKVL+PNPKFR VHSNYFPSEVITY+QW+ LKPEPKSMF GWIKSA RGG KE+QES D
Subjt:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD

Query:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ
        +KL+FVLNTAPMWDRLELKGNN+VLGEFLEFKGKKEDMQALREIKRSKVSCI+IQK+R IGF  SR+RVLYSTR+Y+N+G SASEWKE+T+GS++MVVFQ
Subjt:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ

Query:  MEYSSKVRKISISSIVSLSLSA
        MEYSSKVRKI ISSIVSLSLSA
Subjt:  MEYSSKVRKISISSIVSLSLSA

XP_038888004.1 uncharacterized protein LOC120077943 [Benincasa hispida]

3.1e-162

90.06

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Query:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFA ASRLEKLYGGK F+GLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
Subjt:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD
        GDGRQ S I+PDPVAETRRWV ILESYFE+RGV LPEGYLSWKVL+PNPKFR +HSNYFPSEV+TY+QW  LKPEPKSMF GWIKSAWRGG KEMQESMD
Subjt:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD

Query:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ
        QKL+FVLNTAPMWDRL + GNN+VLGEFLEFK KKEDM ALREI+RSKVSCILIQKIRRIGF SSRVRVLYSTRD RNDGASAS+ KEVTVGSS+MVVFQ
Subjt:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ

Query:  MEYSSKVRKISISSIVSLSLSA
        MEYSSKVRKI+ISSIVSLSLSA
Subjt:  MEYSSKVRKISISSIVSLSLSA

TrEMBL top hits

e value

%identity

Alignment

A0A061EYI0 Plasma membrane isoform 1

5.2e-123

68.01

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Query:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MW EI+CG + +R+ RRFF+  D +E+ET DSNA+F+ A+RLEKLYGGK ++GL IPDADTG RQ+IDMVLVTKGEA VI VKNL+GFVS+S DGSW CE
Subjt:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD
        G G   +E  PDPVAE ++  S+LESY EQRGV LPEGY S+KV++PNPKFR ++ N FPSEVITY+QW+ LKPEPKSMF GWIK A+RGG KEMQES  
Subjt:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD

Query:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ
        Q+L+F+L+TAPMWDRLELKGN  VLGEFLEFKGK+ED  ALR IKRSKVS ++IQK    G   S+++VLYS RDYR++GASASEWKEVTV SS+ V+FQ
Subjt:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ

Query:  MEYSSKVRKISISSIVSLSLSA
         + S+KVRK  +SSI S+SLSA
Subjt:  MEYSSKVRKISISSIVSLSLSA

A0A0A0LKG9 NERD domain-containing protein

4.1e-168

92.24

Show/hide

Query:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MWAEILCGFLAFRVLRRFFFPRDEMEIETIDS+ALFA ASRLEKLYGGKAF+GLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
Subjt:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD
        GDGRQ SEI+PDPVAETRRWVSILESYFEQRGV LPEGYLSWKVL+PNPKFR +HSNYFPSEVI Y+QWIHLKPEPKSMF GWIKSAW GG KEMQ+SMD
Subjt:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD

Query:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ
        QKL+FVLNTAPMWDRLEL GNNIVLGEFLEFK KKEDMQALREI+RSKVSCILIQKIRRIGFV SR RVLYSTRDYRN+GASASEWKEVTVGSS+MVVFQ
Subjt:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ

Query:  MEYSSKVRKISISSIVSLSLSA
        MEYSSKVRK+ ISSIVSLSLSA
Subjt:  MEYSSKVRKISISSIVSLSLSA

A0A6J1DTU9 uncharacterized protein LOC111023945

5.4e-152

84.16

Show/hide

Query:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MWAEILCGF+AFRVLRRFF P+DEMEIE  DSNA+FAAASRLEKLYGG+ F+GLRIPDADTG RQSIDMVLVTKG+AVVI VKNLSG VS+SADGSWICE
Subjt:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD
        GDG Q SEIMPDPV ETRRW SILESY EQRGV LPEGYLS KVL+PNPKFR VH NYFPSEV+TY+Q+I LKPEPKS F GWIK A RGG KEMQESMD
Subjt:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD

Query:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ
        QKL+FVLNTAPMWDRLELKGNN +LGEF+EFKGKKEDMQALR+IKRSKVSCI+IQ++R I FV SR RVLYS RDYRNDGASASEWKEVTVGSS++VVFQ
Subjt:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ

Query:  MEYSSKVRKISISSIVSLSLSA
        MEYSSKVRKI IS+I SLSLSA
Subjt:  MEYSSKVRKISISSIVSLSLSA

A0A6J1H014 uncharacterized protein LOC111459180

7.5e-154

84.47

Show/hide

Query:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        M+ EILCGF+AFR+LRRFF  RDE+EIET DSNALFA ASRLEK+Y GK F+GLRIPDADTGLRQSIDMVLVTKGEAVV+ VKNLSGFVS+SADGSWICE
Subjt:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD
        GDGRQ SEI+PDPVAETRRW SILESY E+RGV LPEGYLSWKVL+PNPKFR VHSNYFPSEVITY+QW+ LKPEPKSMF GWIKSA RGG KE+QES D
Subjt:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD

Query:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ
        +KL+FVLNTAPMWDRLELKGNN+VLGEFLEFKGKKEDMQALREIKRSKVSCI+IQK+R IGF  SR+RVLYSTR+Y+N+G SASEWKE+T+GS++MVVFQ
Subjt:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ

Query:  MEYSSKVRKISISSIVSLSLSA
        MEYSSKVRKI ISSIVSLSLSA
Subjt:  MEYSSKVRKISISSIVSLSLSA

A0A6J1K1B0 uncharacterized protein LOC111490811

8.3e-153

84.16

Show/hide

Query:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MW EILCGF+AFR+LRRFF   D +EIET DSNALFA ASRLEK+Y GK F+GLRIPDADTGLRQSIDMVLVTKGEAVV+ VKNLSGFVS+SADGSWICE
Subjt:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD
        GDGRQ SEI+PDPVAETRRW SILESY E+RGV LPEGYLSWKVL+PNPKFR VHSNYFPSEVITY+QWI LKPE KS+F GWIKSA RGG KEMQES D
Subjt:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD

Query:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ
        +KL+FVLNTAPMWDRLELKGNN+VLGEFLEFKGKKEDMQALREIKRSKVSCI+IQK+R IGF  SR+RVLYSTR+Y+N+G SASEWKE+T+GS++MVVFQ
Subjt:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ

Query:  MEYSSKVRKISISSIVSLSLSA
        MEYSSKVRKI ISSIVSLSLSA
Subjt:  MEYSSKVRKISISSIVSLSLSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G65020.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

6.8e-107

59.94

Show/hide

Query:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE
        MW EI+CG + ++++RRFF+  +  ++ET DS ALF+ A RLEKLYGGKA++GLRIPDADT  RQ ID+VLVTKG+ VVI VKNLSG V++++DGSW+CE
Subjt:  MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICE

Query:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD
        G     +E  PDP+AE ++  S+LESY EQRGVTL EG +S KV++PNP FR +H+  FPSEVITY  W  LKP  KS   GW+K A+  G KEMQES  
Subjt:  GDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMD

Query:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ
        QKL+F+L TAP WDR+ELK + IVLGEFLEFKGK+ED  ALR IKRSKV  + IQK    G   SR++VLYS RDYR++G+S +E KEVTV SS+ V+FQ
Subjt:  QKLHFVLNTAPMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQ

Query:  MEYSSKVRKISISSIVSLSLSA
           S+K++K  +SS+VS+SLSA
Subjt:  MEYSSKVRKISISSIVSLSLSA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGGGCGGAGATTCTCTGTGGCTTCTTAGCATTTAGAGTGCTCAGGCGATTCTTTTTTCCAAGAGACGAAATGGAGATCGAGACCATTGATTCTAATGCCCTA
TTCGCCGCTGCTTCTAGACTGGAGAAGCTTTATGGTGGAAAGGCTTTTATGGGACTTCGAATTCCAGACGCTGACACTGGTTTGCGACAGAGTATTGATATGGTG
CTTGTAACCAAAGGGGAAGCAGTGGTGATATGTGTCAAAAATCTTTCAGGTTTTGTTTCCATGAGTGCTGATGGAAGCTGGATCTGTGAAGGTGATGGTAGACAA
AACTCAGAGATTATGCCTGATCCGGTAGCTGAGACACGAAGATGGGTTTCAATTCTTGAATCATACTTTGAGCAGAGAGGAGTTACGCTACCAGAAGGATATTTA
TCATGGAAAGTTCTGGTTCCCAACCCAAAATTCCGAGTGGTCCATTCAAACTATTTTCCATCTGAAGTCATTACGTATAATCAATGGATACATTTGAAACCAGAA
CCAAAAAGCATGTTCCCTGGTTGGATAAAGAGTGCTTGGCGTGGAGGGAACAAAGAAATGCAGGAATCTATGGATCAGAAGCTACATTTTGTCCTCAACACAGCA
CCCATGTGGGATAGGTTGGAGCTCAAAGGAAATAACATTGTTTTGGGAGAATTCTTGGAGTTCAAAGGGAAAAAGGAAGATATGCAGGCTTTGAGAGAGATTAAA
AGATCAAAAGTTAGTTGCATTCTCATCCAGAAGATCAGAAGGATCGGATTTGTTTCTTCAAGAGTTCGAGTTTTGTACTCTACACGGGATTATCGAAATGATGGT
GCGTCTGCTTCTGAGTGGAAGGAAGTAACAGTAGGATCCAGTTCAATGGTAGTATTTCAGATGGAATATTCATCTAAAGTTCGTAAAATCAGCATCTCTTCAATT
GTATCTCTATCACTTAGTGCCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQ
NSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKFRVVHSNYFPSEVITYNQWIHLKPEPKSMFPGWIKSAWRGGNKEMQESMDQKLHFVLNTA
PMWDRLELKGNNIVLGEFLEFKGKKEDMQALREIKRSKVSCILIQKIRRIGFVSSRVRVLYSTRDYRNDGASASEWKEVTVGSSSMVVFQMEYSSKVRKISISSI
VSLSLSA

ClCG09G013110 (gene) of Watermelon (Charleston Gray) v2.5 genome