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ClCG09G013383 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G013383
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description60S ribosomal protein L35
Genome locationCG_Chr09:19530136..19530459
RNA-Seq ExpressionClCG09G013383
SyntenyClCG09G013383
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR036049 - Ribosomal protein L29/L35 superfamily
IPR045059 - 60S ribosomal protein L35


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV80675.1 Ribosomal_L29 domain-containing protein [Cephalotus follicularis]9.8e-2071.6Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I +RLTKHQASLKTE E++R +
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

KAG7998768.1 hypothetical protein I3843_01G272600 [Carya illinoinensis]1.4e-2167.42Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNVLSIEEICY
        ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++E YKKKK L +DL+PK T  I +RLT+HQASLKT  EEE +V S+EE+C+
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNVLSIEEICY

PON89563.1 Ribosomal protein [Trema orientale]1.7e-1970.37Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYK KKLL +DL+PK T  I +RLTKHQASLKTE E++R++
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

TYG77058.1 hypothetical protein ES288_D03G164700v1 [Gossypium darwinii]9.4e-2370.79Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNVLSIEEICY
        ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKK L +DL+PK T  I +RLTKHQ SLKTE EEE +VLS EE+C+
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNVLSIEEICY

XP_022939961.1 60S ribosomal protein L35 [Cucurbita moschata]2.2e-1970.37Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I +RLTKHQASLKTE E+++ +
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

TrEMBL top hitse value%identityAlignment
A0A1Q3CKE6 Ribosomal_L29 domain-containing protein4.7e-2071.6Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I +RLTKHQASLKTE E++R +
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

A0A2P5EVJ6 Ribosomal protein8.1e-2070.37Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYK KKLL +DL+PK T  I +RLTKHQASLKTE E++R++
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

A0A5D2D7Q5 Uncharacterized protein4.6e-2370.79Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNVLSIEEICY
        ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKK L +DL+PK T  I +RLTKHQ SLKTE EEE +VLS EE+C+
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNVLSIEEICY

A0A6J1FH81 60S ribosomal protein L351.1e-1970.37Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I +RLTKHQASLKTE E+++ +
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

A0A6J1JVN4 60S ribosomal protein L351.1e-1970.37Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I +RLTKHQASLKTE E+++ +
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

SwissProt top hitse value%identityAlignment
O80626 60S ribosomal protein L35-29.2e-2167.9Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I +RLTKHQASLKTE E+++ +
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

Q9LZ41 60S ribosomal protein L35-49.2e-2167.9Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I +RLTKHQASLKTE E+++ +
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

Q9M3D2 60S ribosomal protein L35-33.5e-2066.67Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I +RLTKHQASLKTE E+++++
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

Q9M5L0 60S ribosomal protein L359.2e-2166.67Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK+A++EAYK KK L +DL+PK T  I +RLTKHQ SLKTE E+++ +
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

Q9SF53 60S ribosomal protein L35-14.6e-2066.67Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I +RLTKHQASLKTE E+++ +
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

Arabidopsis top hitse value%identityAlignment
AT2G39390.1 Ribosomal L29 family protein6.5e-2267.9Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I +RLTKHQASLKTE E+++ +
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

AT3G09500.1 Ribosomal L29 family protein3.2e-2166.67Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I +RLTKHQASLKTE E+++ +
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

AT3G55170.1 Ribosomal L29 family protein2.5e-2166.67Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I +RLTKHQASLKTE E+++++
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

AT3G55170.2 Ribosomal L29 family protein2.5e-2166.67Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I +RLTKHQASLKTE E+++++
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV

AT5G02610.1 Ribosomal L29 family protein6.5e-2267.9Show/hide
Query:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV
        ++AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I +RLTKHQASLKTE E+++ +
Subjt:  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAAATGGCAAGGATCAAGGTTCATTAGTTGAGGCAGTAATTGAAGGCAAATTGGCCAAAGTCATCGGTGGTGCACCAAACAAGCTATCCAAAATCAAGGTATT
GAGATTGTCGATCACTCAAGTCCCAATAGTAATTTCTCAAAAGCAGAAGGTGGCAATGAAGGAAGCTTACAAGAAGAAGAAACTTTTGCATGTCGATCTGCAGCCAAAGA
ATACCGAGGTCATTCATAAAAGGCTCACCAAGCACCAGGCTTCTTTGAAAACTGAGACAGAAGAAGAAAGAAATGTACTTTCCATTGAGGAAATATGCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGAAATGGCAAGGATCAAGGTTCATTAGTTGAGGCAGTAATTGAAGGCAAATTGGCCAAAGTCATCGGTGGTGCACCAAACAAGCTATCCAAAATCAAGGTATT
GAGATTGTCGATCACTCAAGTCCCAATAGTAATTTCTCAAAAGCAGAAGGTGGCAATGAAGGAAGCTTACAAGAAGAAGAAACTTTTGCATGTCGATCTGCAGCCAAAGA
ATACCGAGGTCATTCATAAAAGGCTCACCAAGCACCAGGCTTCTTTGAAAACTGAGACAGAAGAAGAAAGAAATGTACTTTCCATTGAGGAAATATGCTATTAA
Protein sequenceShow/hide protein sequence
MGRNGKDQGSLVEAVIEGKLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNVLSIEEICY