; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G013390 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G013390
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptioncleavage and polyadenylation specificity factor subunit 1
Genome locationCG_Chr09:19545282..19557352
RNA-Seq ExpressionClCG09G013390
SyntenyClCG09G013390
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003684 - damaged DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR004871 - Cleavage/polyadenylation specificity factor, A subunit, C-terminal
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011648998.1 cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Cucumis sativus]7.3e-22698.78Show/hide
Query:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
        +A VQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
Subjt:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE

Query:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
        DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
Subjt:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS

Query:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
        WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLST+SDKA STVSDKTNRF
Subjt:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF

Query:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
        ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKL DAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
Subjt:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN

Query:  DLSLGTSFL
        DLSLGTSFL
Subjt:  DLSLGTSFL

XP_031736799.1 cleavage and polyadenylation specificity factor subunit 1 isoform X2 [Cucumis sativus]7.3e-22698.78Show/hide
Query:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
        +A VQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
Subjt:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE

Query:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
        DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
Subjt:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS

Query:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
        WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLST+SDKA STVSDKTNRF
Subjt:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF

Query:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
        ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKL DAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
Subjt:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN

Query:  DLSLGTSFL
        DLSLGTSFL
Subjt:  DLSLGTSFL

XP_038887722.1 cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Benincasa hispida]5.6e-22699.02Show/hide
Query:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
        +A VQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
Subjt:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE

Query:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
        DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
Subjt:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS

Query:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
        WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
Subjt:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF

Query:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
        ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKL DAVPHVGGLNPRSFRQF SNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
Subjt:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN

Query:  DLSLGTSFL
        DLSLGTSFL
Subjt:  DLSLGTSFL

XP_038887723.1 cleavage and polyadenylation specificity factor subunit 1 isoform X2 [Benincasa hispida]5.6e-22699.02Show/hide
Query:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
        +A VQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
Subjt:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE

Query:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
        DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
Subjt:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS

Query:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
        WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
Subjt:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF

Query:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
        ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKL DAVPHVGGLNPRSFRQF SNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
Subjt:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN

Query:  DLSLGTSFL
        DLSLGTSFL
Subjt:  DLSLGTSFL

XP_038887724.1 cleavage and polyadenylation specificity factor subunit 1 isoform X3 [Benincasa hispida]5.6e-22699.02Show/hide
Query:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
        +A VQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
Subjt:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE

Query:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
        DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
Subjt:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS

Query:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
        WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
Subjt:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF

Query:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
        ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKL DAVPHVGGLNPRSFRQF SNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
Subjt:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN

Query:  DLSLGTSFL
        DLSLGTSFL
Subjt:  DLSLGTSFL

TrEMBL top hitse value%identityAlignment
A0A0A0LKI9 Uncharacterized protein3.5e-22698.78Show/hide
Query:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
        +A VQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
Subjt:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE

Query:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
        DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
Subjt:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS

Query:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
        WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLST+SDKA STVSDKTNRF
Subjt:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF

Query:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
        ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKL DAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
Subjt:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN

Query:  DLSLGTSFL
        DLSLGTSFL
Subjt:  DLSLGTSFL

A0A1S3B4E8 cleavage and polyadenylation specificity factor subunit 1 isoform X13.9e-22598.29Show/hide
Query:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
        +A VQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLN TTKENETLLAVGTAYVQGE
Subjt:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE

Query:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
        DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
Subjt:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS

Query:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
        WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLST+SDKA STVSDKTNRF
Subjt:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF

Query:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
        ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKL DAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQL+IAHQIGTTRSQILSNLN
Subjt:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN

Query:  DLSLGTSFL
        DLSLGTSFL
Subjt:  DLSLGTSFL

A0A1S4DU39 cleavage and polyadenylation specificity factor subunit 1 isoform X23.9e-22598.29Show/hide
Query:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
        +A VQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLN TTKENETLLAVGTAYVQGE
Subjt:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE

Query:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
        DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
Subjt:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS

Query:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
        WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLST+SDKA STVSDKTNRF
Subjt:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF

Query:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
        ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKL DAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQL+IAHQIGTTRSQILSNLN
Subjt:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN

Query:  DLSLGTSFL
        DLSLGTSFL
Subjt:  DLSLGTSFL

A0A1S4DU68 cleavage and polyadenylation specificity factor subunit 1 isoform X33.9e-22598.29Show/hide
Query:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
        +A VQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLN TTKENETLLAVGTAYVQGE
Subjt:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE

Query:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
        DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
Subjt:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS

Query:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
        WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLST+SDKA STVSDKTNRF
Subjt:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF

Query:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
        ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKL DAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQL+IAHQIGTTRSQILSNLN
Subjt:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN

Query:  DLSLGTSFL
        DLSLGTSFL
Subjt:  DLSLGTSFL

A0A5A7U3R4 Cleavage and polyadenylation specificity factor subunit 1 isoform X33.9e-22598.29Show/hide
Query:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE
        +A VQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLN TTKENETLLAVGTAYVQGE
Subjt:  AATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE

Query:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
        DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS
Subjt:  DVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLS

Query:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF
        WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLST+SDKA STVSDKTNRF
Subjt:  WKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRF

Query:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
        ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKL DAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQL+IAHQIGTTRSQILSNLN
Subjt:  ALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN

Query:  DLSLGTSFL
        DLSLGTSFL
Subjt:  DLSLGTSFL

SwissProt top hitse value%identityAlignment
Q10569 Cleavage and polyadenylation specificity factor subunit 13.3e-5635.75Show/hide
Query:  ENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQT--RATIAMHSSENALTIRVVTLLNTTTKEN-ETLLAVGTAYVQGEDVAARGRVLLFSV-------
        E   +  DE       E F I+++ P      W+    A I +   E+   ++ V+L +  T    +  +A GT  +QGE+V  RGR+L+  V       
Subjt:  ENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQT--RATIAMHSSENALTIRVVTLLNTTTKEN-ETLLAVGTAYVQGEDVAARGRVLLFSV-------

Query:  GKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAK
        G+    ++  V  +Y KE KG ++AL    GHL+ A G KI L     +EL G+AF D   LY+  +  VKNFIL  D+ KSI  L ++E+   LSL+++
Subjt:  GKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAK

Query:  DFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRFALLFGTLDGSIGC
        D   L+ Y+ +F++D + L   VSD  +N+ ++ Y P++ ES+ G +LL RA+FHVGAHV  F R          +  +V  + N+    F TLDG IG 
Subjt:  DFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRFALLFGTLDGSIGC

Query:  IAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNL
        + P+ E T+RRL  LQ  L   +PH  GLNPR+FR  H + +V +    +++D ELL  Y  L   E+ ++A +IGTT   IL +L
Subjt:  IAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNL

Q10570 Cleavage and polyadenylation specificity factor subunit 18.8e-5735.75Show/hide
Query:  ENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQT--RATIAMHSSENALTIRVVTLLNTTTKEN-ETLLAVGTAYVQGEDVAARGRVLLFSV-------
        E   +  DE       E F I+++ P      W+    A I +   E+   ++ V+L +  T    +  +A GT  +QGE+V  RGR+L+  V       
Subjt:  ENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQT--RATIAMHSSENALTIRVVTLLNTTTKEN-ETLLAVGTAYVQGEDVAARGRVLLFSV-------

Query:  GKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAK
        G+    ++  V  +Y KE KG ++AL    GHL+ A G KI L     +EL G+AF D   LY+  +  VKNFIL  D+ KSI  L ++E+   LSL+++
Subjt:  GKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAK

Query:  DFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRFALLFGTLDGSIGC
        D   L+ Y+ +F++D + L   VSD  +N+ ++ Y P++ ES+ G +LL RA+FHVGAHV  F R      T   +  +V  + N+    F TLDG IG 
Subjt:  DFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRFALLFGTLDGSIGC

Query:  IAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNL
        + P+ E T+RRL  LQ  L   +PH  GLNPR+FR  H + +  +    +++D ELL  Y  L   E+ ++A +IGTT   IL +L
Subjt:  IAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNL

Q7XWP1 Probable cleavage and polyadenylation specificity factor subunit 12.0e-17377.15Show/hide
Query:  VQKPLNQVLSSMVDQD-VGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGEDV
        V +PLNQVLSSM DQ+ V H++N   S D L +TY+V+EFE+RILE EK GG W+T++TI M   ENALT+R+VTL NTTTKENETLLA+GTAYV GEDV
Subjt:  VQKPLNQVLSSMVDQD-VGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGEDV

Query:  AARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWK
        AARGRVLLFS  K ++NSQ LV+EVYSKE KGA+SA+ASLQGHLLIASGPKI L+KWTGAEL  +AFYD  PL+VVSLNIVKNF+L GDIHKSIYFLSWK
Subjt:  AARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWK

Query:  EQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRFAL
        EQG+QLSLLAKDFGSLDC+ATEFLIDGSTLSL  SD  KN+QIFYYAPK  ESWKGQKLLSRAEFHVGAH+TKFLRLQML T         S+KTNRFAL
Subjt:  EQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRFAL

Query:  LFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLNDL
        LFG LDG IGCIAP+DELTFRRLQSLQ+KL DAVPHV GLNPRSFRQFHSNGK HR GPD+I+D ELLC YEML L+EQLD+A QIGTTRSQILSN +D+
Subjt:  LFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLNDL

Query:  SLGTSFL
        SLGTSFL
Subjt:  SLGTSFL

Q9EPU4 Cleavage and polyadenylation specificity factor subunit 11.1e-5636.22Show/hide
Query:  EEFEIRILEPEKSGGPWQT--RATIAMHSSENALTIRVVTLLNTTTKEN-ETLLAVGTAYVQGEDVAARGRVLLFSV-------GKDADNSQTLVSEVYS
        E F I+++ P      W+    A I +   E+   ++ V+L +  T    +  +A GT  +QGE+V  RGR+L+  V       G+    ++  V  +Y 
Subjt:  EEFEIRILEPEKSGGPWQT--RATIAMHSSENALTIRVVTLLNTTTKEN-ETLLAVGTAYVQGEDVAARGRVLLFSV-------GKDADNSQTLVSEVYS

Query:  KELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCYATEFLIDG
        KE KG ++AL    GHL+ A G KI L     +EL G+AF D   LY+  +  VKNFIL  D+ KSI  L ++E+   LSL+++D   L+ Y+ +F++D 
Subjt:  KELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCYATEFLIDG

Query:  STLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQ
        + L   VSD  +N+ ++ Y P++ ES+ G +LL RA+FHVGAHV  F R          +  +V  + N+    F TLDG IG + P+ E T+RRL  LQ
Subjt:  STLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQ

Query:  KKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNL
          L   +PH  GLNPR+FR  H + ++ +    +++D ELL  Y  L   E+ ++A +IGTT   IL +L
Subjt:  KKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNL

Q9FGR0 Cleavage and polyadenylation specificity factor subunit 19.3e-18478.62Show/hide
Query:  VQKPLNQVLSSMVDQDVG-HVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGEDV
        V KPLNQVLSS+VDQ+ G  ++NHN+S+D+LQ+TY+VEEFEI+ILEPE+SGGPW+T+A I M +SE+ALT+RVVTLLN +T ENETLLAVGTAYVQGEDV
Subjt:  VQKPLNQVLSSMVDQDVG-HVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGEDV

Query:  AARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWK
        AARGRVLLFS GK+ DNSQ +V+EVYS+ELKGAISA+AS+QGHLLI+SGPKIILHKW G ELNG+AF+D PPLYVVS+N+VK+FILLGD+HKSIYFLSWK
Subjt:  AARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWK

Query:  EQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRFAL
        EQG+QLSLLAKDF SLDC+ATEFLIDGSTLSL VSD+QKNIQ+FYYAPK  ESWKG KLLSRAEFHVGAHV+KFLRLQM+S+         +DK NRFAL
Subjt:  EQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRFAL

Query:  LFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLNDL
        LFGTLDGS GCIAPLDE+TFRRLQSLQKKL DAVPHV GLNP +FRQF S+GK  R GPDSIVDCELLCHYEMLPLEEQL++AHQIGTTR  IL +L DL
Subjt:  LFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLNDL

Query:  SLGTSFL
        S+GTSFL
Subjt:  SLGTSFL

Arabidopsis top hitse value%identityAlignment
AT4G05420.1 damaged DNA binding protein 1A2.6e-1926.44Show/hide
Query:  TKENETLLAVGTAYV-QGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWT-----GAELNGIAFY--DVPP
        T++      VGTAYV   E+   +GR+L+F V    D    L++E   KE KGA+ +L +  G LL A   KI L+KW        EL     +   +  
Subjt:  TKENETLLAVGTAYV-QGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWT-----GAELNGIAFY--DVPP

Query:  LYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVT
        LYV +     +FI++GD+ KSI  L +K +   +   A+D+ +    A E L D   + L   ++   + +   +  +T+  +G +L    E+H+G  V 
Subjt:  LYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVT

Query:  KFLRLQMLSTTSDKASSTVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYE
        +F    ++    D     +        ++FGT++G IG IA L +  +  L+ LQ  L   +  VGGL+   +R F  N +       + +D +L+  + 
Subjt:  KFLRLQMLSTTSDKASSTVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYE

Query:  MLPLEEQLDIAHQIGTTRSQILSNLNDLS
         L   +  DI+  +     ++   + +L+
Subjt:  MLPLEEQLDIAHQIGTTRSQILSNLNDLS

AT4G05420.2 damaged DNA binding protein 1A2.6e-1926.44Show/hide
Query:  TKENETLLAVGTAYV-QGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWT-----GAELNGIAFY--DVPP
        T++      VGTAYV   E+   +GR+L+F V    D    L++E   KE KGA+ +L +  G LL A   KI L+KW        EL     +   +  
Subjt:  TKENETLLAVGTAYV-QGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWT-----GAELNGIAFY--DVPP

Query:  LYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVT
        LYV +     +FI++GD+ KSI  L +K +   +   A+D+ +    A E L D   + L   ++   + +   +  +T+  +G +L    E+H+G  V 
Subjt:  LYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVT

Query:  KFLRLQMLSTTSDKASSTVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYE
        +F    ++    D     +        ++FGT++G IG IA L +  +  L+ LQ  L   +  VGGL+   +R F  N +       + +D +L+  + 
Subjt:  KFLRLQMLSTTSDKASSTVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYE

Query:  MLPLEEQLDIAHQIGTTRSQILSNLNDLS
         L   +  DI+  +     ++   + +L+
Subjt:  MLPLEEQLDIAHQIGTTRSQILSNLNDLS

AT4G21100.1 damaged DNA binding protein 1B3.1e-1728.78Show/hide
Query:  TKENETLLAVGTAYV-QGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWT-----GAELNGIAFY--DVPP
        T +      VGTAYV   E+   +GR+L+F V    +    L++E   KE KGA+ +L +  G LL +   KI L+KW        EL     +   +  
Subjt:  TKENETLLAVGTAYV-QGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWT-----GAELNGIAFY--DVPP

Query:  LYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVT
        LYV +     +FI +GD+ KSI  L +K +   +   A+D+ +    A E L D   L    +D+  NI       +     +  ++    E+H+G  V 
Subjt:  LYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVT

Query:  KFLRLQMLSTTSDKASSTVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHS
        +F    ++    D      SD      ++FGT+ G IG IA L +  +  L+ LQ  L   +  VGGL+   +R F++
Subjt:  KFLRLQMLSTTSDKASSTVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHS

AT5G51660.1 cleavage and polyadenylation specificity factor 1606.6e-18578.62Show/hide
Query:  VQKPLNQVLSSMVDQDVG-HVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGEDV
        V KPLNQVLSS+VDQ+ G  ++NHN+S+D+LQ+TY+VEEFEI+ILEPE+SGGPW+T+A I M +SE+ALT+RVVTLLN +T ENETLLAVGTAYVQGEDV
Subjt:  VQKPLNQVLSSMVDQDVG-HVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGEDV

Query:  AARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWK
        AARGRVLLFS GK+ DNSQ +V+EVYS+ELKGAISA+AS+QGHLLI+SGPKIILHKW G ELNG+AF+D PPLYVVS+N+VK+FILLGD+HKSIYFLSWK
Subjt:  AARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWK

Query:  EQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRFAL
        EQG+QLSLLAKDF SLDC+ATEFLIDGSTLSL VSD+QKNIQ+FYYAPK  ESWKG KLLSRAEFHVGAHV+KFLRLQM+S+         +DK NRFAL
Subjt:  EQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKASSTVSDKTNRFAL

Query:  LFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLNDL
        LFGTLDGS GCIAPLDE+TFRRLQSLQKKL DAVPHV GLNP +FRQF S+GK  R GPDSIVDCELLCHYEMLPLEEQL++AHQIGTTR  IL +L DL
Subjt:  LFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLNDL

Query:  SLGTSFL
        S+GTSFL
Subjt:  SLGTSFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCAGCTGTGCCGGAGATGATGATGGGAGCAGTGATGAGGACTTCAAACGGTGGCAGCCAATCAATGAGCAAAAAACCTAGAACAAGAACAGGGGAAAGGACATT
AGACTTGAAGGCTGCGACGGTTCAGAAGCCATTGAATCAAGTGCTGTCATCAATGGTTGATCAAGATGTTGGTCACGTTGAGAATCATAACTTGAGTGCTGATGAGCTGC
AGCAAACTTACTCTGTGGAAGAGTTTGAGATTCGGATTTTGGAACCAGAAAAATCTGGTGGCCCTTGGCAAACTAGGGCTACAATTGCTATGCACAGTTCTGAAAATGCC
CTTACCATTCGTGTTGTTACACTGTTGAACACAACCACAAAAGAGAATGAAACACTTTTAGCTGTTGGAACTGCATATGTCCAAGGGGAGGATGTTGCTGCAAGAGGAAG
AGTGCTTTTATTTTCTGTTGGAAAAGATGCTGATAATTCACAGACCTTGGTTTCAGAAGTTTATTCAAAAGAATTGAAGGGTGCTATTTCTGCTTTAGCCTCTCTGCAAG
GTCATCTATTGATAGCTTCTGGTCCTAAAATAATCTTACACAAGTGGACTGGTGCAGAGTTGAATGGCATTGCCTTTTATGACGTTCCACCCTTATATGTTGTGAGCTTG
AACATTGTCAAGAATTTCATACTTCTTGGTGATATACACAAGAGCATTTACTTTCTGAGTTGGAAAGAACAGGGAGCTCAACTTAGCTTGTTGGCGAAGGATTTTGGTTC
TCTAGACTGCTATGCAACAGAATTTCTGATTGATGGAAGCACTCTTAGTCTTACTGTTTCTGATGATCAGAAGAATATTCAGATATTTTATTATGCACCAAAGTCGACTG
AGAGTTGGAAAGGGCAGAAGCTTCTGTCAAGAGCTGAATTTCATGTGGGTGCTCATGTGACGAAGTTTCTACGGCTACAGATGTTGTCTACCACTTCGGACAAAGCAAGC
AGTACAGTTTCTGACAAGACCAATCGCTTTGCTTTGTTATTTGGCACCCTCGATGGAAGCATTGGTTGCATTGCACCTCTCGATGAACTCACATTTCGTAGACTGCAGTC
ATTACAAAAGAAGCTTGCTGATGCCGTACCGCATGTTGGTGGTTTAAATCCAAGGTCTTTTCGCCAGTTTCATTCAAATGGAAAGGTTCATCGACGTGGGCCAGACAGCA
TAGTTGATTGTGAATTACTATGCCACTATGAGATGCTACCATTGGAGGAGCAGCTTGATATTGCTCACCAAATCGGGACAACTCGTTCGCAGATTCTCTCAAACTTGAAT
GATCTCTCTCTGGGAACAAGTTTCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCAGCTGTGCCGGAGATGATGATGGGAGCAGTGATGAGGACTTCAAACGGTGGCAGCCAATCAATGAGCAAAAAACCTAGAACAAGAACAGGGGAAAGGACATT
AGACTTGAAGGCTGCGACGGTTCAGAAGCCATTGAATCAAGTGCTGTCATCAATGGTTGATCAAGATGTTGGTCACGTTGAGAATCATAACTTGAGTGCTGATGAGCTGC
AGCAAACTTACTCTGTGGAAGAGTTTGAGATTCGGATTTTGGAACCAGAAAAATCTGGTGGCCCTTGGCAAACTAGGGCTACAATTGCTATGCACAGTTCTGAAAATGCC
CTTACCATTCGTGTTGTTACACTGTTGAACACAACCACAAAAGAGAATGAAACACTTTTAGCTGTTGGAACTGCATATGTCCAAGGGGAGGATGTTGCTGCAAGAGGAAG
AGTGCTTTTATTTTCTGTTGGAAAAGATGCTGATAATTCACAGACCTTGGTTTCAGAAGTTTATTCAAAAGAATTGAAGGGTGCTATTTCTGCTTTAGCCTCTCTGCAAG
GTCATCTATTGATAGCTTCTGGTCCTAAAATAATCTTACACAAGTGGACTGGTGCAGAGTTGAATGGCATTGCCTTTTATGACGTTCCACCCTTATATGTTGTGAGCTTG
AACATTGTCAAGAATTTCATACTTCTTGGTGATATACACAAGAGCATTTACTTTCTGAGTTGGAAAGAACAGGGAGCTCAACTTAGCTTGTTGGCGAAGGATTTTGGTTC
TCTAGACTGCTATGCAACAGAATTTCTGATTGATGGAAGCACTCTTAGTCTTACTGTTTCTGATGATCAGAAGAATATTCAGATATTTTATTATGCACCAAAGTCGACTG
AGAGTTGGAAAGGGCAGAAGCTTCTGTCAAGAGCTGAATTTCATGTGGGTGCTCATGTGACGAAGTTTCTACGGCTACAGATGTTGTCTACCACTTCGGACAAAGCAAGC
AGTACAGTTTCTGACAAGACCAATCGCTTTGCTTTGTTATTTGGCACCCTCGATGGAAGCATTGGTTGCATTGCACCTCTCGATGAACTCACATTTCGTAGACTGCAGTC
ATTACAAAAGAAGCTTGCTGATGCCGTACCGCATGTTGGTGGTTTAAATCCAAGGTCTTTTCGCCAGTTTCATTCAAATGGAAAGGTTCATCGACGTGGGCCAGACAGCA
TAGTTGATTGTGAATTACTATGCCACTATGAGATGCTACCATTGGAGGAGCAGCTTGATATTGCTCACCAAATCGGGACAACTCGTTCGCAGATTCTCTCAAACTTGAAT
GATCTCTCTCTGGGAACAAGTTTCTTATAATTGGACGAGACTCATTAGATTGTATAGCCGTGTATTACAATCAAGTTGCATATTCATTGTAAGAGTAGTTCAAACAAATC
ATGTACTGCCCCATTCTCAGCTCCTTAGACGTTTTGTTTGTTACCAACTTAAATCAAGTTAGAATGAAAAAAGGAGAAAGAGAACTGCTGTATCCATCCCAGTCTTGTGG
GTTCCAATTGCTGTATTTAATGCTCATTAGAACCAATTTTCCAGTCGTATATGTACCAAGAACATAGGACATGAAAGTTTTTTTCTTTGTATTTCGATGCCATGGTATCT
TCTTTTAGTTTCTTGTTGATTATCCTAATATTGTATCTGTACTAGATGCTTTGCCTAATATTAAATTTGTCAAGCATAAACCTTTGGATTAATTGGTGATTTAAGATTAT
ATCAATGCAAGAGGTCTAAGAGGTCATGTGTTCAAATCCATGCATTGTTAT
Protein sequenceShow/hide protein sequence
MVAAVPEMMMGAVMRTSNGGSQSMSKKPRTRTGERTLDLKAATVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENA
LTIRVVTLLNTTTKENETLLAVGTAYVQGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSL
NIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTSDKAS
STVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLADAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLN
DLSLGTSFL