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ClCG09G013410 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G013410
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionGag-pol polyprotein
Genome locationCG_Chr09:19698715..19700105
RNA-Seq ExpressionClCG09G013410
SyntenyClCG09G013410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041779.1 uncharacterized protein E6C27_scaffold67G001380 [Cucumis melo var. makuwa]1.4e-1045.05Show/hide
Query:  QITRASIKAKGKRTS-SSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI
        Q  R ++  K  R    +NV  V +D +SFH EE    WKFV++R IVD   + D+ Q    +M+L+  AGLE+T+ N+GPFYPQL  EFI
Subjt:  QITRASIKAKGKRTS-SSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI

TYK27067.1 uncharacterized protein E5676_scaffold95G00660 [Cucumis melo var. makuwa]1.4e-1045.05Show/hide
Query:  QITRASIKAKGKRTS-SSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI
        Q  R ++  K  R    +NV  V +D +SFH EE    WKFV++R IVD   + D+ Q    +M+L+  AGLE+T+ N+GPFYPQL  EFI
Subjt:  QITRASIKAKGKRTS-SSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI

XP_008457264.1 PREDICTED: uncharacterized protein LOC103496990 [Cucumis melo]8.4e-1148.1Show/hide
Query:  KRTSSSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI
        ++  S NV  V +D +SFH EE    WKFV++R IVD+  + D+ Q    +M+L+  AGLE+T+ N+GPFYPQL  EFI
Subjt:  KRTSSSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI

XP_038904247.1 uncharacterized protein LOC120090596 [Benincasa hispida]9.9e-1250Show/hide
Query:  GKRTSSSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI
        G+R    NV +VL+D +SFHSE+    WKFVV+R IVD+K   D+T+   ++M+LL + GL +T+ NL PFYPQL  E I
Subjt:  GKRTSSSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI

XP_038904458.1 uncharacterized protein LOC120090822 [Benincasa hispida]8.1e-1465.22Show/hide
Query:  SNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQL
        SNV  V LD VSFH+EE ASLWK+VVKRNIV +KEL D TQ   + MEL+  A LERT+ NLGP+YP L
Subjt:  SNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQL

TrEMBL top hitse value%identityAlignment
A0A1S3C6D9 uncharacterized protein LOC1034969904.1e-1148.1Show/hide
Query:  KRTSSSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI
        ++  S NV  V +D +SFH EE    WKFV++R IVD+  + D+ Q    +M+L+  AGLE+T+ N+GPFYPQL  EFI
Subjt:  KRTSSSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI

A0A5A7T712 Cell wall protein RBR3-like6.9e-1145Show/hide
Query:  GKRTSSSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI
        G++   SN+S V +D +SFH +E    WK+VV+R IVD+  + D+       M+L++ AGL +T+ N+GPFYPQL  EFI
Subjt:  GKRTSSSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI

A0A5A7TK74 Uncharacterized protein6.9e-1145.05Show/hide
Query:  QITRASIKAKGKRTS-SSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI
        Q  R ++  K  R    +NV  V +D +SFH EE    WKFV++R IVD   + D+ Q    +M+L+  AGLE+T+ N+GPFYPQL  EFI
Subjt:  QITRASIKAKGKRTS-SSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI

A0A5D3CSU3 Uncharacterized protein1.2e-1043.96Show/hide
Query:  QITRASIKAKGKRTS-SSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI
        Q  R ++  K  R    +NV  V +D +SFH EE    WKFV+++ IVDK  + D+ Q    +M+L+  AGLE+T+ ++GPFYPQL  EFI
Subjt:  QITRASIKAKGKRTS-SSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI

A0A5D3DTI5 Uncharacterized protein6.9e-1145.05Show/hide
Query:  QITRASIKAKGKRTS-SSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI
        Q  R ++  K  R    +NV  V +D +SFH EE    WKFV++R IVD   + D+ Q    +M+L+  AGLE+T+ N+GPFYPQL  EFI
Subjt:  QITRASIKAKGKRTS-SSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTCACAACCGCTCCGTCTCACTCTCTTGTTCGTATTCAGTGTTATTCCTCACTAGATGGTGAGTATAAGACAAGATGGTGCATTACAAGGAAAAAGAAA
AGAGGAAGTTGTTTGTCGAAGAAGAAGTTCCTCCTTCCACCACGAACAAGTATGGTGTTCGTTTTCGAGGACTCCTTGTGCCAAGTATTGAAGTTGGTGTTCCTC
GTCCATCTGCCAAATGAAGACGATCTAGAGTTGGTGTTTTTACCGAGGAAAAGGGAAAAGAGAAATGAGAATGTCAAATCGTCTTCTATTGTTGAAAAGGAAGTT
AGGGTTACAGAGAGGAAGATTATTACTGATGAGCATAGTGTGCCTATGTCTGGTAATGTTGAGTCGATTTTGCTTGAATCTGTTTCTATTGAAAAAGAAAATGTT
CGTTTGCCTGGGTTTGCCTTTCTCGATAAGGAAACTTTTACTGTGTCTGACAAGAATGTGTTAGATGAGTTTGTTGATAAAGTTATTTTTGAAACTGTTGCTTCT
ATCTCCAAATTCCTAAGTCTAAGTACTGCATGTGAGATGTTACAATCTGGTGCAGAGGATGTTGAACCTCTTCCTAAGACATCTGAAATGGTTGAACCTAGAAGT
GGTCTTGGTGATATTGTCGACAACACTAAGGTTACTGAAGTTACTGAGGAAATTAAGGCTGGTGATGTCTTTGAGTGTGCTACAAGCCAAGAGCTTCTCAAGAAA
GTCCTTGACACAGCTCAAGATGACAAAACTCCATCTGATGAAGACGGTGACGATGATTCTCCCTTGACTATTCTACAGTCAAAGAAAAATGAAGATGTCAATGAT
GATGTTGATGCTTATCCTGTGACATTGGATCATGAATTTGAAAAGTTTGAAAAATCTCCCTTTGAAGAAGCATCTGATTGGGGTTTCCTGAAGAGTTTTGATGAG
TTGAACACTGGTTTTGTTCAAATAACTCGTGCCTCTATTAAAGCCAAAGGTAAACGGACTTCCTCCTCAAATGTTTCTCTAGTGCTATTAGATGTTGTGTCTTTT
CACTCTGAAGAAGGTGCCAGCCTTTGGAAGTTTGTTGTCAAACGAAATATAGTAGATAAAAAAGAGTTATTTGATCGCACCCAAGATTATGCTGAACTCATGGAG
TTGCTTCTGAATGCTGGCTTGGAACGAACTATGTTCAACTTGGGGCCTTTCTATCCACAACTTGGGTGGGAGTTCATT
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTCACAACCGCTCCGTCTCACTCTCTTGTTCGTATTCAGTGTTATTCCTCACTAGATGGTGAGTATAAGACAAGATGGTGCATTACAAGGAAAAAGAAA
AGAGGAAGTTGTTTGTCGAAGAAGAAGTTCCTCCTTCCACCACGAACAAGTATGGTGTTCGTTTTCGAGGACTCCTTGTGCCAAGTATTGAAGTTGGTGTTCCTC
GTCCATCTGCCAAATGAAGACGATCTAGAGTTGGTGTTTTTACCGAGGAAAAGGGAAAAGAGAAATGAGAATGTCAAATCGTCTTCTATTGTTGAAAAGGAAGTT
AGGGTTACAGAGAGGAAGATTATTACTGATGAGCATAGTGTGCCTATGTCTGGTAATGTTGAGTCGATTTTGCTTGAATCTGTTTCTATTGAAAAAGAAAATGTT
CGTTTGCCTGGGTTTGCCTTTCTCGATAAGGAAACTTTTACTGTGTCTGACAAGAATGTGTTAGATGAGTTTGTTGATAAAGTTATTTTTGAAACTGTTGCTTCT
ATCTCCAAATTCCTAAGTCTAAGTACTGCATGTGAGATGTTACAATCTGGTGCAGAGGATGTTGAACCTCTTCCTAAGACATCTGAAATGGTTGAACCTAGAAGT
GGTCTTGGTGATATTGTCGACAACACTAAGGTTACTGAAGTTACTGAGGAAATTAAGGCTGGTGATGTCTTTGAGTGTGCTACAAGCCAAGAGCTTCTCAAGAAA
GTCCTTGACACAGCTCAAGATGACAAAACTCCATCTGATGAAGACGGTGACGATGATTCTCCCTTGACTATTCTACAGTCAAAGAAAAATGAAGATGTCAATGAT
GATGTTGATGCTTATCCTGTGACATTGGATCATGAATTTGAAAAGTTTGAAAAATCTCCCTTTGAAGAAGCATCTGATTGGGGTTTCCTGAAGAGTTTTGATGAG
TTGAACACTGGTTTTGTTCAAATAACTCGTGCCTCTATTAAAGCCAAAGGTAAACGGACTTCCTCCTCAAATGTTTCTCTAGTGCTATTAGATGTTGTGTCTTTT
CACTCTGAAGAAGGTGCCAGCCTTTGGAAGTTTGTTGTCAAACGAAATATAGTAGATAAAAAAGAGTTATTTGATCGCACCCAAGATTATGCTGAACTCATGGAG
TTGCTTCTGAATGCTGGCTTGGAACGAACTATGTTCAACTTGGGGCCTTTCTATCCACAACTTGGGTGGGAGTTCATT
Protein sequenceShow/hide protein sequence
MVFTTAPSHSLVRIQCYSSLDGEYKTRWCITRKKKRGSCLSKKKFLLPPRTSMVFVFEDSLCQVLKLVFLVHLPNEDDLELVFLPRKREKRNENVKSSSIVEKEV
RVTERKIITDEHSVPMSGNVESILLESVSIEKENVRLPGFAFLDKETFTVSDKNVLDEFVDKVIFETVASISKFLSLSTACEMLQSGAEDVEPLPKTSEMVEPRS
GLGDIVDNTKVTEVTEEIKAGDVFECATSQELLKKVLDTAQDDKTPSDEDGDDDSPLTILQSKKNEDVNDDVDAYPVTLDHEFEKFEKSPFEEASDWGFLKSFDE
LNTGFVQITRASIKAKGKRTSSSNVSLVLLDVVSFHSEEGASLWKFVVKRNIVDKKELFDRTQDYAELMELLLNAGLERTMFNLGPFYPQLGWEFI