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ClCG09G013640 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G013640
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionzf-RVT domain-containing protein
Genome locationCG_Chr09:20751041..20754342
RNA-Seq ExpressionClCG09G013640
SyntenyClCG09G013640
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055668.1 uncharacterized protein E6C27_scaffold181G00360 [Cucumis melo var. makuwa]1.0e-0958.33Show/hide
Query:  YETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGKFDTC
        Y+ +N+AL+ KW W++L E+DSLWCKVV+SIHG D   WHT+GK + C
Subjt:  YETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGKFDTC

RVW15386.1 putative ribonuclease H protein [Vitis vinifera]1.3e-0930.99Show/hide
Query:  VKCDPSKLRRLKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTS---GKFDTCSWNLLFRKRIKEEEIIDSSSCCARS
        V C P KL  L          F     +NIAL+ KW W+F  E++SLW KV+ SI+G+ P+ W  +        C W  L+                 ++
Subjt:  VKCDPSKLRRLKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTS---GKFDTCSWNLLFRKRIKEEEIIDSSSCCARS

Query:  PRRVNILAWIMIYGSLNCSTTLQHKLRDQILSPSICPLCLEN
        P +V  LAW++++G +N +  LQ +   + L P +C LC  N
Subjt:  PRRVNILAWIMIYGSLNCSTTLQHKLRDQILSPSICPLCLEN

RVW71406.1 Uridylate kinase [Vitis vinifera]2.2e-0927.47Show/hide
Query:  VKKLVEQIKGIKIDKGK---CLSLGVKCDPSKLRRLKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTS----GKFDT
        ++KL        + +GK    +   V C P++LR L          F     +NIAL+ KW W+FL E++ LW KV+ SI+G  P+ W  +    G  D+
Subjt:  VKKLVEQIKGIKIDKGK---CLSLGVKCDPSKLRRLKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTS----GKFDT

Query:  CSWNLLFRKRIKEEEIIDSSS--------------CCARSPRRVNILAWIMIYGSLNCSTTLQHKLRDQILSPSICPLCLEN
         +W L        +    + S                +++P +V  LAW++++G +N +  LQ +   + L P  C LC  N
Subjt:  CSWNLLFRKRIKEEEIIDSSS--------------CCARSPRRVNILAWIMIYGSLNCSTTLQHKLRDQILSPSICPLCLEN

RVW93876.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]7.2e-0829.55Show/hide
Query:  LKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGKF---DTCSWNLLFRKRIKEEEIIDSSSCCARSPRRVNILAWI
        + + KE     F     +NIAL+ KW W+F  E+  LW KV+ SI+G  P+ W T+        C W  + +        +      ++ P +V  LAW+
Subjt:  LKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGKF---DTCSWNLLFRKRIKEEEIIDSSSCCARSPRRVNILAWI

Query:  MIYGSLNCSTTLQHKLRDQILSPSICPLCLEN
        + +G +N +  LQ +   + L P  C LC  N
Subjt:  MIYGSLNCSTTLQHKLRDQILSPSICPLCLEN

TYK09922.1 uncharacterized protein E5676_scaffold16G00380 [Cucumis melo var. makuwa]3.1e-1140.57Show/hide
Query:  YETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGKFDTCSWNLLFRKRIKEEEIIDSSSCCARSPRRVNILAWIMIYGSLNCSTTLQHKLR
        Y+ +N+AL+ KW W++L E+DSLWCKV           W   GK    S   L    +   + +  +     SPRRVNIL WI++ G+LN ST +QHKL 
Subjt:  YETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGKFDTCSWNLLFRKRIKEEEIIDSSSCCARSPRRVNILAWIMIYGSLNCSTTLQHKLR

Query:  DQILSP
        +  LSP
Subjt:  DQILSP

TrEMBL top hitse value%identityAlignment
A0A438BWM3 Putative ribonuclease H protein6.3e-1030.99Show/hide
Query:  VKCDPSKLRRLKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTS---GKFDTCSWNLLFRKRIKEEEIIDSSSCCARS
        V C P KL  L          F     +NIAL+ KW W+F  E++SLW KV+ SI+G+ P+ W  +        C W  L+                 ++
Subjt:  VKCDPSKLRRLKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTS---GKFDTCSWNLLFRKRIKEEEIIDSSSCCARS

Query:  PRRVNILAWIMIYGSLNCSTTLQHKLRDQILSPSICPLCLEN
        P +V  LAW++++G +N +  LQ +   + L P +C LC  N
Subjt:  PRRVNILAWIMIYGSLNCSTTLQHKLRDQILSPSICPLCLEN

A0A438GGS3 Uridylate kinase1.1e-0927.47Show/hide
Query:  VKKLVEQIKGIKIDKGK---CLSLGVKCDPSKLRRLKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTS----GKFDT
        ++KL        + +GK    +   V C P++LR L          F     +NIAL+ KW W+FL E++ LW KV+ SI+G  P+ W  +    G  D+
Subjt:  VKKLVEQIKGIKIDKGK---CLSLGVKCDPSKLRRLKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTS----GKFDT

Query:  CSWNLLFRKRIKEEEIIDSSS--------------CCARSPRRVNILAWIMIYGSLNCSTTLQHKLRDQILSPSICPLCLEN
         +W L        +    + S                +++P +V  LAW++++G +N +  LQ +   + L P  C LC  N
Subjt:  CSWNLLFRKRIKEEEIIDSSS--------------CCARSPRRVNILAWIMIYGSLNCSTTLQHKLRDQILSPSICPLCLEN

A0A438IAY6 Transposon TX1 uncharacterized 149 kDa protein3.5e-0829.55Show/hide
Query:  LKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGKF---DTCSWNLLFRKRIKEEEIIDSSSCCARSPRRVNILAWI
        + + KE     F     +NIAL+ KW W+F  E+  LW KV+ SI+G  P+ W T+        C W  + +        +      ++ P +V  LAW+
Subjt:  LKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGKF---DTCSWNLLFRKRIKEEEIIDSSSCCARSPRRVNILAWI

Query:  MIYGSLNCSTTLQHKLRDQILSPSICPLCLEN
        + +G +N +  LQ +   + L P  C LC  N
Subjt:  MIYGSLNCSTTLQHKLRDQILSPSICPLCLEN

A0A5A7UKS5 Uncharacterized protein4.8e-1058.33Show/hide
Query:  YETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGKFDTC
        Y+ +N+AL+ KW W++L E+DSLWCKVV+SIHG D   WHT+GK + C
Subjt:  YETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGKFDTC

A0A5D3CF41 Uncharacterized protein1.5e-1140.57Show/hide
Query:  YETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGKFDTCSWNLLFRKRIKEEEIIDSSSCCARSPRRVNILAWIMIYGSLNCSTTLQHKLR
        Y+ +N+AL+ KW W++L E+DSLWCKV           W   GK    S   L    +   + +  +     SPRRVNIL WI++ G+LN ST +QHKL 
Subjt:  YETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGKFDTCSWNLLFRKRIKEEEIIDSSSCCARSPRRVNILAWIMIYGSLNCSTTLQHKLR

Query:  DQILSP
        +  LSP
Subjt:  DQILSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGATCAACCAAGAAAAGGGATTCAGTCTCCCAACATTATGAAGTACCAGAGGGCAGTTAAGAAACTAGTAGAGCAAATCAAAGGGATAAAAATTGACAAGGGGAA
ATGTTTATCGTTGGGGGTTAAATGCGATCCTTCTAAACTAAGAAGGCTGAAAAAGGTGAAAGAAAAGGTGAAAACATGGTTTGCAACTTATGAAACTAAGAATATAGCAC
TTATTTTTAAATGGAATTGGAAATTCTTACATGAACAAGACTCTCTATGGTGCAAAGTGGTCAAAAGCATACATGGAGTAGATCCTCATTACTGGCATACTTCTGGAAAG
TTTGATACTTGCTCTTGGAATTTGTTGTTCCGAAAGCGAATAAAAGAAGAGGAGATAATTGATTCCAGCAGTTGTTGTGCCAGAAGTCCAAGAAGAGTTAACATATTGGC
ATGGATTATGATTTATGGATCTCTTAATTGCTCGACAACCTTGCAGCATAAGCTTAGAGATCAAATTTTGTCCCCATCTATTTGTCCACTTTGTTTAGAAAATGCAACTG
TTGGTAGAATTAAAGCCTTGATTTCAGAAATTTGGTTTAAATGCAACCAGAGAATATTTCAAGATAAGTCCTCCAAATGGTTAGATCGTTTTGGTTCAACTTGTCTCCTT
GCTTCATCTTTGTGTGCTCCATCTACGCTACTCATGCCTCGTTTCATTATATCAATGAAAAGTTCTATTTTCATTTCAAAAAAAACAAAGTGTGGTGGGGATGAGGCCCC
TTTCCTCTTTATTTCCTTGTTTATACCACTTGTCCTCTATGAAACTCAACTGGTAGCTTCCATGTTTTCCTCTTTGGGGGCTCCTCTCCTTCTCTTGACTTTAGGTTCTG
TTGTCAATTATCCGATAGGAAAACATTGGATATTTTGGCCCTTGTATCTTTGCTTGGGGATTTCTCTACTAACTCGGGGAGGAGGGATCTTCGTATTTGGAACCTTCGTC
CTTCTAAGGGGGGTTCACTACACTTCCTCT
mRNA sequenceShow/hide mRNA sequence
ATGATTGATCAACCAAGAAAAGGGATTCAGTCTCCCAACATTATGAAGTACCAGAGGGCAGTTAAGAAACTAGTAGAGCAAATCAAAGGGATAAAAATTGACAAGGGGAA
ATGTTTATCGTTGGGGGTTAAATGCGATCCTTCTAAACTAAGAAGGCTGAAAAAGGTGAAAGAAAAGGTGAAAACATGGTTTGCAACTTATGAAACTAAGAATATAGCAC
TTATTTTTAAATGGAATTGGAAATTCTTACATGAACAAGACTCTCTATGGTGCAAAGTGGTCAAAAGCATACATGGAGTAGATCCTCATTACTGGCATACTTCTGGAAAG
TTTGATACTTGCTCTTGGAATTTGTTGTTCCGAAAGCGAATAAAAGAAGAGGAGATAATTGATTCCAGCAGTTGTTGTGCCAGAAGTCCAAGAAGAGTTAACATATTGGC
ATGGATTATGATTTATGGATCTCTTAATTGCTCGACAACCTTGCAGCATAAGCTTAGAGATCAAATTTTGTCCCCATCTATTTGTCCACTTTGTTTAGAAAATGCAACTG
TTGGTAGAATTAAAGCCTTGATTTCAGAAATTTGGTTTAAATGCAACCAGAGAATATTTCAAGATAAGTCCTCCAAATGGTTAGATCGTTTTGGTTCAACTTGTCTCCTT
GCTTCATCTTTGTGTGCTCCATCTACGCTACTCATGCCTCGTTTCATTATATCAATGAAAAGTTCTATTTTCATTTCAAAAAAAACAAAGTGTGGTGGGGATGAGGCCCC
TTTCCTCTTTATTTCCTTGTTTATACCACTTGTCCTCTATGAAACTCAACTGGTAGCTTCCATGTTTTCCTCTTTGGGGGCTCCTCTCCTTCTCTTGACTTTAGGTTCTG
TTGTCAATTATCCGATAGGAAAACATTGGATATTTTGGCCCTTGTATCTTTGCTTGGGGATTTCTCTACTAACTCGGGGAGGAGGGATCTTCGTATTTGGAACCTTCGTC
CTTCTAAGGGGGGTTCACTACACTTCCTCT
Protein sequenceShow/hide protein sequence
MIDQPRKGIQSPNIMKYQRAVKKLVEQIKGIKIDKGKCLSLGVKCDPSKLRRLKKVKEKVKTWFATYETKNIALIFKWNWKFLHEQDSLWCKVVKSIHGVDPHYWHTSGK
FDTCSWNLLFRKRIKEEEIIDSSSCCARSPRRVNILAWIMIYGSLNCSTTLQHKLRDQILSPSICPLCLENATVGRIKALISEIWFKCNQRIFQDKSSKWLDRFGSTCLL
ASSLCAPSTLLMPRFIISMKSSIFISKKTKCGGDEAPFLFISLFIPLVLYETQLVASMFSSLGAPLLLLTLGSVVNYPIGKHWIFWPLYLCLGISLLTRGGGIFVFGTFV
LLRGVHYTSS