; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G013645 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G013645
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNuclear transcription factor Y subunit C
Genome locationCG_Chr09:20823609..20824409
RNA-Seq ExpressionClCG09G013645
SyntenyClCG09G013645
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136852.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus]5.8e-13898.11Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGV AGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITK S+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQ PRPSMPFMPWPHTQPQQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSD

XP_022157652.1 nuclear transcription factor Y subunit C-2 [Momordica charantia]1.7e-13495.86Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGV AGQLPYSNPY+T  MVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITK SIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSDA
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQ PRP MPFMPWPHTQPQQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSDA

XP_022927856.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata]6.8e-13194.05Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGV AGQLPYSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITK SIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHT---QPQQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQ PRP +PFMPWPHT   Q QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHT---QPQQQQQTQQQSDA

XP_022988890.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima]2.3e-13194.42Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGV AGQLPYSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITK SIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHT---QPQQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQ PRP +PFMPWPHT   Q QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHT---QPQQQQQTQQQSDA

XP_038888434.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida]1.7e-13797.37Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQH QQSQQPAG V AGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITK SIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSDA
        SPADLPYYYVPSQHPVGATGMIMGKQLDQ NMYG TAQ PRPSMPFMPWPHTQPQQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSDA

TrEMBL top hitse value%identityAlignment
A0A0A0K5U1 Histone domain-containing protein2.8e-13898.11Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGV AGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITK S+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQ PRPSMPFMPWPHTQPQQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSD

A0A1S3C190 nuclear transcription factor Y subunit C-22.8e-13898.11Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGV AGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITK S+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQ PRPSMPFMPWPHTQPQQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSD

A0A5A7SLP2 Nuclear transcription factor Y subunit C-22.8e-13898.11Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGV AGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITK S+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQ PRPSMPFMPWPHTQPQQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSD

A0A6J1DV19 nuclear transcription factor Y subunit C-28.4e-13595.86Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGV AGQLPYSNPY+T  MVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITK SIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSDA
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQ PRP MPFMPWPHTQPQQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSDA

A0A6J1JII4 nuclear transcription factor Y subunit C-2-like1.1e-13194.42Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGV AGQLPYSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITK SIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHT---QPQQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQ PRP +PFMPWPHT   Q QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHT---QPQQQQQTQQQSDA

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-43.4e-6459.62Show/hide
Query:  QPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSP------HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QPA GV AG       Y+ A  V +  PA+    +QP  SF  +P      HQL YQQAQ FH Q QQQQQ+QLQ FWA ++ +IEQTTDFKNHSLPLAR
Subjt:  QPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSP------HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPAD-LPY
        IKKIMKADEDVRMISAEAPVIFAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG+G+ +  +P +G PAD  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPAD-LPY

Query:  -YYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQ-QTQQQSD
         YYVP Q   GA              YG    HP        W   Q QQ++   +QQSD
Subjt:  -YYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQ-QTQQQSD

Q8L4B2 Nuclear transcription factor Y subunit C-93.0e-5756.59Show/hide
Query:  QQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G ++ G    +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKGSIPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I +G++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKGSIPVVGSPADLPY

Query:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQS
         Y+P+   P+G  GM+MG      N  GA      P  P+M  P  Q Q   Q  Q++
Subjt:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQS

Q8LCG7 Nuclear transcription factor Y subunit C-23.8e-6869.91Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD
        M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTD
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD

Query:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIP-
        FKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TKG+IP 
Subjt:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIP-

Query:  VVGSPADLPYYYVPSQ
        VVGSP   PYYY+  Q
Subjt:  VVGSPADLPYYYVPSQ

Q9SMP0 Nuclear transcription factor Y subunit C-11.1e-5459.6Show/hide
Query:  AITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELT
        A  IPP  P ++ S +    +Y       H   QQQQQQLQ+FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT
Subjt:  AITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELT

Query:  LRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHP
        +RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +  G + V  + + +PYYY P   P G  GM++G+     N  G   Q P
Subjt:  LRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHP

Q9ZVL3 Nuclear transcription factor Y subunit C-39.2e-5456.71Show/hide
Query:  SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAP
        SNPYQT  M            T P  S   + HQ+        H QQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAP
Subjt:  SNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAP

Query:  VIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYV-PSQHPVGATGMIMGKQ
        V+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG   G      + A  PY Y+ P   P+G  GM+MG  
Subjt:  VIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYV-PSQHPVGATGMIMGKQ

Query:  LDQANMYGATAQHPRPSMPFMPWPHTQPQQQ
                  A  P P M    W    P+QQ
Subjt:  LDQANMYGATAQHPRPSMPFMPWPHTQPQQQ

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C92.2e-5856.59Show/hide
Query:  QQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G ++ G    +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKGSIPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I +G++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKGSIPVVGSPADLPY

Query:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQS
         Y+P+   P+G  GM+MG      N  GA      P  P+M  P  Q Q   Q  Q++
Subjt:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQS

AT1G08970.3 nuclear factor Y, subunit C92.2e-5856.59Show/hide
Query:  QQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G ++ G    +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKGSIPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I +G++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKGSIPVVGSPADLPY

Query:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQS
         Y+P+   P+G  GM+MG      N  GA      P  P+M  P  Q Q   Q  Q++
Subjt:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQS

AT1G08970.4 nuclear factor Y, subunit C92.2e-5856.59Show/hide
Query:  QQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G ++ G    +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKGSIPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I +G++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKGSIPVVGSPADLPY

Query:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQS
         Y+P+   P+G  GM+MG      N  GA      P  P+M  P  Q Q   Q  Q++
Subjt:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQS

AT1G56170.1 nuclear factor Y, subunit C22.7e-6969.91Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD
        M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTD
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD

Query:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIP-
        FKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TKG+IP 
Subjt:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIP-

Query:  VVGSPADLPYYYVPSQ
        VVGSP   PYYY+  Q
Subjt:  VVGSPADLPYYYVPSQ

AT1G56170.2 nuclear factor Y, subunit C22.7e-6969.91Show/hide
Query:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD
        M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTD
Subjt:  MDQSERSQHQQQSQQPAGGVSAGQLPYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD

Query:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIP-
        FKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TKG+IP 
Subjt:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIP-

Query:  VVGSPADLPYYYVPSQ
        VVGSP   PYYY+  Q
Subjt:  VVGSPADLPYYYVPSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCACAGCAGCCTGCAGGCGGTGTCAGTGCAGGTCAATTACCATATTCTAATCCTTACCAAACAGCTCCGATGGT
GGCTTCTGGGACTCCTGCTATTACAATTCCCCCAACTCAGCCACCATCCAGTTTCTCTAATTCTCCACACCAGCTTGCCTACCAGCAGGCTCAGCACTTCCACCACCAGC
AACAGCAGCAGCAGCAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTTCCCCTTGCTCGAATCAAG
AAAATTATGAAAGCAGACGAAGACGTCCGAATGATTTCAGCTGAAGCACCAGTTATATTCGCGAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGAT
TCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATTGCAGCTGCAATTTCAAGGACTGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAAC
TGAAAGAGGAAGGTCTTGGAATCACGAAAGGTTCCATTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCAGTGGGTGCTACAGGG
ATGATCATGGGGAAGCAATTAGATCAAGCAAACATGTACGGTGCCACCGCTCAACACCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATACTCAACCTCAGCAGCA
GCAACAAACTCAGCAGCAAAGTGATGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCACAGCAGCCTGCAGGCGGTGTCAGTGCAGGTCAATTACCATATTCTAATCCTTACCAAACAGCTCCGATGGT
GGCTTCTGGGACTCCTGCTATTACAATTCCCCCAACTCAGCCACCATCCAGTTTCTCTAATTCTCCACACCAGCTTGCCTACCAGCAGGCTCAGCACTTCCACCACCAGC
AACAGCAGCAGCAGCAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTTCCCCTTGCTCGAATCAAG
AAAATTATGAAAGCAGACGAAGACGTCCGAATGATTTCAGCTGAAGCACCAGTTATATTCGCGAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGAT
TCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATTGCAGCTGCAATTTCAAGGACTGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAAC
TGAAAGAGGAAGGTCTTGGAATCACGAAAGGTTCCATTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCAGTGGGTGCTACAGGG
ATGATCATGGGGAAGCAATTAGATCAAGCAAACATGTACGGTGCCACCGCTCAACACCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATACTCAACCTCAGCAGCA
GCAACAAACTCAGCAGCAAAGTGATGCATAG
Protein sequenceShow/hide protein sequence
MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIK
KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATG
MIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSDA