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ClCG09G013882 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G013882
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCCHC-type domain-containing protein
Genome locationCG_Chr09:21735790..21736281
RNA-Seq ExpressionClCG09G013882
SyntenyClCG09G013882
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5469007.1 hypothetical protein F2P56_013112 [Juglans regia]1.9e-2237.58Show/hide
Query:  FWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQHF
        FW+R+ D+PL  +N  +GK +G  +GEFLE +  +  + WGE +R++V++DI+ PL+R   ++ G+  +  W+   YE LPDFCY CG +GH ++EC  F
Subjt:  FWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQHF

Query:  SGEDRIETEPFQYGSWLRYEGSNPRRRRKTSSPRSEKEESPVAPSTQDPPSLYQGDP
           +  E +   YG+WLR   S+P+R  +  +    KE S  A    DPP     +P
Subjt:  SGEDRIETEPFQYGSWLRYEGSNPRRRRKTSSPRSEKEESPVAPSTQDPPSLYQGDP

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]8.4e-2339.84Show/hide
Query:  MAFWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQ
        ++ W+   D+ L   NK M  RLG+A+G F + E +  N+CWG  LR++V  D+ KPL RGI +     +   WI  +YE LPDF Y CGR+ H++K+C 
Subjt:  MAFWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQ

Query:  HFSGEDRIETEPFQYGSWLRYEG
            +    ++  QYG WLR++G
Subjt:  HFSGEDRIETEPFQYGSWLRYEG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.0e-2845.07Show/hide
Query:  MAFWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKEC-
        +AFWI L D+P+ + NK M  RLG+A+G F++ +C+++ + WG SLR++V+IDITKPLRRGI I     +   WI  +YE LPDFCY CG IGH   +C 
Subjt:  MAFWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKEC-

Query:  -QHFSGEDRIETEPFQYGSWLRYEGS--NPRRRRKTSSPRSE
         ++ + +D       +YG WLR+ GS    ++ RK  SP  E
Subjt:  -QHFSGEDRIETEPFQYGSWLRYEGS--NPRRRRKTSSPRSE

XP_024642377.1 uncharacterized protein LOC112422874 [Medicago truncatula]5.8e-2444.72Show/hide
Query:  FWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQHF
        FW+R+ D+PL  ++ +M ++LGD +G+FLE +  ++    G+S+R+KV ID+  PL+RGI ++  +   SLWI  KYE LP+FCY CGRIGH +KEC+  
Subjt:  FWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQHF

Query:  SGED-----RIETEPFQYGSWLR
        +G+D      +E +   YGSW+R
Subjt:  SGED-----RIETEPFQYGSWLR

XP_042944768.1 uncharacterized protein LOC122278651 [Carya illinoinensis]5.3e-2544.96Show/hide
Query:  MAFWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQ
        +AFW+++ D+PL  QN  +GKR+G  LGE  E + ++    WGE +R++V++DIT+PL+R  W++ G+G DS W+   YE LP+ CY CG +GH V+EC+
Subjt:  MAFWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQ

Query:  HFS-GEDRIETEPFQYGSWLRYE-GSNPR
            GE    +E  QYG W+R   GSN R
Subjt:  HFS-GEDRIETEPFQYGSWLRYE-GSNPR

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054814.1e-2339.84Show/hide
Query:  MAFWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQ
        ++ W+   D+ L   NK M  RLG+A+G F + E +  N+CWG  LR++V  D+ KPL RGI +     +   WI  +YE LPDF Y CGR+ H++K+C 
Subjt:  MAFWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQ

Query:  HFSGEDRIETEPFQYGSWLRYEG
            +    ++  QYG WLR++G
Subjt:  HFSGEDRIETEPFQYGSWLRYEG

A0A6J1DU55 uncharacterized protein LOC1110231351.4e-2845.07Show/hide
Query:  MAFWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKEC-
        +AFWI L D+P+ + NK M  RLG+A+G F++ +C+++ + WG SLR++V+IDITKPLRRGI I     +   WI  +YE LPDFCY CG IGH   +C 
Subjt:  MAFWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKEC-

Query:  -QHFSGEDRIETEPFQYGSWLRYEGS--NPRRRRKTSSPRSE
         ++ + +D       +YG WLR+ GS    ++ RK  SP  E
Subjt:  -QHFSGEDRIETEPFQYGSWLRYEGS--NPRRRRKTSSPRSE

A0A6P9EH14 uncharacterized protein LOC1089842009.1e-2337.58Show/hide
Query:  FWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQHF
        FW+R+ D+PL  +N  +GK +G  +GEFLE +  +  + WGE +R++V++DI+ PL+R   ++ G+  +  W+   YE LPDFCY CG +GH ++EC  F
Subjt:  FWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQHF

Query:  SGEDRIETEPFQYGSWLRYEGSNPRRRRKTSSPRSEKEESPVAPSTQDPPSLYQGDP
           +  E +   YG+WLR   S+P+R  +  +    KE S  A    DPP     +P
Subjt:  SGEDRIETEPFQYGSWLRYEGSNPRRRRKTSSPRSEKEESPVAPSTQDPPSLYQGDP

A0A803MW53 Uncharacterized protein1.5e-2242.74Show/hide
Query:  FWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQHF
        FWIRL+D+P G ++  +   +G+ +GE ++ + + +  CW E +R+KV+++I KPLRRG+ I   +G  + WI  KYE L DFCY CGRIGH  K+C+  
Subjt:  FWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQHF

Query:  SGEDRIETEPFQYGSWL
         G   +    FQYG +L
Subjt:  SGEDRIETEPFQYGSWL

A0A803NE16 Uncharacterized protein1.5e-2242.74Show/hide
Query:  FWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQHF
        FWIRL+D+P G ++  +   +G+ +GE ++ + + +  CW E +R+KV+++I KPLRRG+ I   +G  + WI  KYE L DFCY CGRIGH  K+C+  
Subjt:  FWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQHF

Query:  SGEDRIETEPFQYGSWL
         G   +    FQYG +L
Subjt:  SGEDRIETEPFQYGSWL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein9.6e-0930.93Show/hide
Query:  FWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKEC
        FW+++  IP  F N+ + + +G ALG+ L+ + + E     +  R+ +  DIT PLR     +   G+++L +  +YE L  FC  CG + H    C
Subjt:  FWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTTTGGATTCGCTTAATGGATATTCCTCTTGGATTTCAAAACAAGGTTATGGGAAAACGGCTAGGAGATGCATTAGGAGAATTTTTGGAAGCTGAATGTGACCA
AGAAAATTATTGCTGGGGAGAAAGCCTAAGGCTCAAAGTCATAATTGATATCACAAAACCCCTAAGAAGGGGAATATGGATAGAACCGGGGGAGGGTCTTGATAGCTTAT
GGATCCACGCAAAGTATGAAATACTTCCTGATTTCTGCTATGGTTGCGGAAGAATAGGTCATGTAGTCAAGGAGTGTCAGCATTTTTCAGGAGAGGATAGGATTGAAACT
GAGCCTTTTCAGTATGGAAGTTGGCTGAGATATGAAGGTAGTAACCCAAGACGCAGAAGGAAAACTTCATCCCCAAGAAGCGAGAAAGAAGAGTCTCCTGTGGCTCCATC
AACCCAAGATCCCCCATCCCTTTACCAAGGCGATCCCCCTCCAATCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTTTGGATTCGCTTAATGGATATTCCTCTTGGATTTCAAAACAAGGTTATGGGAAAACGGCTAGGAGATGCATTAGGAGAATTTTTGGAAGCTGAATGTGACCA
AGAAAATTATTGCTGGGGAGAAAGCCTAAGGCTCAAAGTCATAATTGATATCACAAAACCCCTAAGAAGGGGAATATGGATAGAACCGGGGGAGGGTCTTGATAGCTTAT
GGATCCACGCAAAGTATGAAATACTTCCTGATTTCTGCTATGGTTGCGGAAGAATAGGTCATGTAGTCAAGGAGTGTCAGCATTTTTCAGGAGAGGATAGGATTGAAACT
GAGCCTTTTCAGTATGGAAGTTGGCTGAGATATGAAGGTAGTAACCCAAGACGCAGAAGGAAAACTTCATCCCCAAGAAGCGAGAAAGAAGAGTCTCCTGTGGCTCCATC
AACCCAAGATCCCCCATCCCTTTACCAAGGCGATCCCCCTCCAATCTTCTAA
Protein sequenceShow/hide protein sequence
MAFWIRLMDIPLGFQNKVMGKRLGDALGEFLEAECDQENYCWGESLRLKVIIDITKPLRRGIWIEPGEGLDSLWIHAKYEILPDFCYGCGRIGHVVKECQHFSGEDRIET
EPFQYGSWLRYEGSNPRRRRKTSSPRSEKEESPVAPSTQDPPSLYQGDPPPIF