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ClCG09G014090 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G014090
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionFlocculation protein FLO11-like
Genome locationCG_Chr09:23836870..23837532
RNA-Seq ExpressionClCG09G014090
SyntenyClCG09G014090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049619.1 uncharacterized protein E6C27_scaffold163G00790 [Cucumis melo var. makuwa]3.8e-0751.32Show/hide
Query:  VEEGVQASLGFQRSSNEEEDAGNVCVTWASAKAKGKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKEL
        V  G  ++ GF   S + E      VT AS K KGK+ + + V SV LD VSFHT+E ASLWK++VK+NIV+EKEL
Subjt:  VEEGVQASLGFQRSSNEEEDAGNVCVTWASAKAKGKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKEL

KAA0058927.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]6.1e-0561.36Show/hide
Query:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD
        G+Q    NV SVP+D VSFH+EE A  WKYVVKR I+DE  +VD
Subjt:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD

XP_008441650.1 PREDICTED: uncharacterized protein LOC103485731 [Cucumis melo]6.1e-0561.36Show/hide
Query:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD
        G+Q    NV SVP+D VSFH+EE A  WKYVVKR I+DE  +VD
Subjt:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD

XP_008457140.1 PREDICTED: flocculation protein FLO11-like [Cucumis melo]4.0e-0456.82Show/hide
Query:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD
        G++    NVSS+P+D VSFH+EE A  WKYVVKR I DE  + D
Subjt:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD

XP_038904458.1 uncharacterized protein LOC120090822 [Benincasa hispida]8.6e-0784.21Show/hide
Query:  ANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD
        +NV  VPLD VSFHTEESASLWKYVVKRNIV EKEL D
Subjt:  ANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD

TrEMBL top hitse value%identityAlignment
A0A1S3B3W7 uncharacterized protein LOC1034857313.0e-0561.36Show/hide
Query:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD
        G+Q    NV SVP+D VSFH+EE A  WKYVVKR I+DE  +VD
Subjt:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD

A0A1S3C4X0 flocculation protein FLO11-like1.9e-0456.82Show/hide
Query:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD
        G++    NVSS+P+D VSFH+EE A  WKYVVKR I DE  + D
Subjt:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD

A0A5A7TV21 Flocculation protein FLO11-like1.9e-0456.82Show/hide
Query:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD
        G++    NVSS+P+D VSFH+EE A  WKYVVKR I DE  + D
Subjt:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD

A0A5D3D0J7 Uncharacterized protein1.9e-0751.32Show/hide
Query:  VEEGVQASLGFQRSSNEEEDAGNVCVTWASAKAKGKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKEL
        V  G  ++ GF   S + E      VT AS K KGK+ + + V SV LD VSFHT+E ASLWK++VK+NIV+EKEL
Subjt:  VEEGVQASLGFQRSSNEEEDAGNVCVTWASAKAKGKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKEL

A0A5D3DJ92 Flocculation protein FLO11-like3.0e-0561.36Show/hide
Query:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD
        G+Q    NV SVP+D VSFH+EE A  WKYVVKR I+DE  +VD
Subjt:  GKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACTGACTTTGTTAATCAAGTTCTCTCTGAAACTGTTGCTTCCGTGATTAATGAGGTTGAGGCTGTTAGGTTCAGGAATGTGGCTAATGGTGTGAGGGGTAAAGA
TTCAGAATGTACAGATGCTAAGGCCAATGATCATGTCTCGAGTAATGAGATTCGTGTGGAAGTTCCTGCTCCTACTTATGACGATAACAAGGCTCATCTAAGAGTCGATG
CTGATAGTGAAGATGAAGAAGTGAGACATGAGGATGTCGAAGAAGGTGTACAGGCTTCTCTTGGTTTTCAAAGAAGCTCAAATGAAGAAGAAGACGCTGGTAATGTCTGT
GTCACTTGGGCTTCAGCTAAAGCCAAAGGGAAACAGTCGACTAGTGCAAATGTCTCCTCTGTTCCTTTGGATGATGTGTCCTTTCACACAGAGGAAAGTGCCAGCTTGTG
GAAATATGTTGTCAAACGCAATATTGTGGATGAAAAGGAGCTAGTTGATAGCGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAACTGACTTTGTTAATCAAGTTCTCTCTGAAACTGTTGCTTCCGTGATTAATGAGGTTGAGGCTGTTAGGTTCAGGAATGTGGCTAATGGTGTGAGGGGTAAAGA
TTCAGAATGTACAGATGCTAAGGCCAATGATCATGTCTCGAGTAATGAGATTCGTGTGGAAGTTCCTGCTCCTACTTATGACGATAACAAGGCTCATCTAAGAGTCGATG
CTGATAGTGAAGATGAAGAAGTGAGACATGAGGATGTCGAAGAAGGTGTACAGGCTTCTCTTGGTTTTCAAAGAAGCTCAAATGAAGAAGAAGACGCTGGTAATGTCTGT
GTCACTTGGGCTTCAGCTAAAGCCAAAGGGAAACAGTCGACTAGTGCAAATGTCTCCTCTGTTCCTTTGGATGATGTGTCCTTTCACACAGAGGAAAGTGCCAGCTTGTG
GAAATATGTTGTCAAACGCAATATTGTGGATGAAAAGGAGCTAGTTGATAGCGCTTAG
Protein sequenceShow/hide protein sequence
MSTDFVNQVLSETVASVINEVEAVRFRNVANGVRGKDSECTDAKANDHVSSNEIRVEVPAPTYDDNKAHLRVDADSEDEEVRHEDVEEGVQASLGFQRSSNEEEDAGNVC
VTWASAKAKGKQSTSANVSSVPLDDVSFHTEESASLWKYVVKRNIVDEKELVDSA