; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G014445 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G014445
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCCHC-type domain-containing protein
Genome locationCG_Chr09:25799414..25800512
RNA-Seq ExpressionClCG09G014445
SyntenyClCG09G014445
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833168.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]1.1e-7584.18Show/hide
Query:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL
        MIFLRH LHE LKMEYLTIKD  ILWKNLKQRYDHQKTVILPK RYEWMHLRLQDFKSVSDYN ALFKISSKLLLCGEKITDA MLE TFSTF+ASNM +
Subjt:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL

Query:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNN----CGCGCGHDSGRIRNNYFFHG
        QQQ REKGFKQYSELISCLLVAEQNNELLMKNHES+PTGTTPF EVNA+NFNN     G G G D GR RN+Y+F G
Subjt:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNN----CGCGCGHDSGRIRNNYFFHG

XP_022144017.1 uncharacterized protein LOC111013806 [Momordica charantia]1.8e-7078.53Show/hide
Query:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL
        MIFLRH LHE LKMEYLTIKD   LW+NLK+RYDHQKTVILPK RYEWMHLRLQDFKSVSDYN ALFKISSKL LCGEKITD++MLEKT+STF+ SN+ L
Subjt:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL

Query:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNN----CGCGCGHDSGRIRNNYFFHG
        QQQ REKGFK+YSELISCLLVA+QNNELLMKNHES+PTG TPF E NA+NFNN     G G G D GR RNN+ F G
Subjt:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNN----CGCGCGHDSGRIRNNYFFHG

XP_028757260.1 uncharacterized protein LOC114716420 [Prosopis alba]3.0e-6577.25Show/hide
Query:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL
        MIFLRH LHE LKMEYLTIKDP +LW NLK+RYDHQKTVILPK RYEWMHLRLQDFKSVS+YN A+F+ISS+L LCGEK+TD +MLEKTFSTF+ASN+ L
Subjt:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL

Query:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVN-ALNFNNCGCGCGHDSGRIR
        QQQ REKGFK+YSELISCLLVAEQNNELLMKNHES+PTG+TPF E N  +N    G G GH   R R
Subjt:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVN-ALNFNNCGCGCGHDSGRIR

XP_028800998.1 uncharacterized protein LOC114756230 [Prosopis alba]6.0e-6677.84Show/hide
Query:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL
        MIFLRH LHE LKMEYLTIKDP ILW NLK+RYDHQKTVILPK RYEWMHLRLQDFKSVS+YN A+F+ISS+L LCGEK+TD +MLEKTFSTF+ASN+ L
Subjt:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL

Query:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVN-ALNFNNCGCGCGHDSGRIR
        QQQ REK FK+YSELISCLLVAEQNNELLMKNHES+PTG+TPF E N  +N    GCG GH   R R
Subjt:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVN-ALNFNNCGCGCGHDSGRIR

XP_028801898.1 uncharacterized protein LOC114757071 [Prosopis alba]2.5e-6476.05Show/hide
Query:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL
        MIFLRH LHE LKMEYLTIKDP +LW NLK+RYDHQKTVILPK RYEWMHLRLQDFKSVS+YN A+F+ISS+L LCGEK+TD +MLEKTFSTF+ SN+ L
Subjt:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL

Query:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVN-ALNFNNCGCGCGHDSGRIR
        QQQ REKGFK+YSELISCLLVAEQNNELLMKNHES+PTG+TPF + N  +N    G G GH   R R
Subjt:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVN-ALNFNNCGCGCGHDSGRIR

TrEMBL top hitse value%identityAlignment
A0A2N9I863 CCHC-type domain-containing protein3.9e-6371.84Show/hide
Query:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL
        MIF+RH LHEELK EYLT+KDP ILW NLK+RY+HQKTVILPK RY+WMHLRLQDFKSVS+YN ALFKISS+L LCGEKITD +MLEKT++TF+ASN+ L
Subjt:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL

Query:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNN----CGCGCGHD---SGRIRN
        QQQ RE+ F +YSELISCLLVAEQNNELL+KNH+S+PTG+TPF EVN  +F+N     G G GH     GR +N
Subjt:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNN----CGCGCGHD---SGRIRN

A0A438ID00 Retrovirus-related Pol polyprotein from transposon TNT 1-944.3e-6270.69Show/hide
Query:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL
        +IFLRH LHE LK EYLT+KDP  LW NLK+RYDHQKTVILPK RY+WMHLRLQDFK+VS+YN ALFKISS+L LCGEKIT+ +MLEKTF+TF+ASN+ L
Subjt:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL

Query:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNNCGCGCGHDSGRIR-NNYFFHG
        QQQ RE+ F +YSELISCLLVAEQNNELLM+NH+S+PTG+ PF EVNA++    G G G   GR R  N  +HG
Subjt:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNNCGCGCGHDSGRIR-NNYFFHG

A0A6J1CSH6 uncharacterized protein LOC1110138068.7e-7178.53Show/hide
Query:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL
        MIFLRH LHE LKMEYLTIKD   LW+NLK+RYDHQKTVILPK RYEWMHLRLQDFKSVSDYN ALFKISSKL LCGEKITD++MLEKT+STF+ SN+ L
Subjt:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL

Query:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNN----CGCGCGHDSGRIRNNYFFHG
        QQQ REKGFK+YSELISCLLVA+QNNELLMKNHES+PTG TPF E NA+NFNN     G G G D GR RNN+ F G
Subjt:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNN----CGCGCGHDSGRIRNNYFFHG

A5AJ43 Uncharacterized protein1.3e-6170.11Show/hide
Query:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL
        +IFLRH LHE LK EY T+KDP  LW NLK+RYDHQKTVILPK RY+WMHLRLQDFK+VS+YN ALFKISS+L LCGEKIT+ +MLEKTF+TF+ASN+ L
Subjt:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL

Query:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNNCGCGCGHDSGRIR-NNYFFHG
        QQQ RE+ F +YSELISCLLVAEQNNELLM+NH+S+PTG+ PF EVNA++    G G G   GR R  N  +HG
Subjt:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNNCGCGCGHDSGRIR-NNYFFHG

A5C0A9 Uncharacterized protein1.6e-6169.89Show/hide
Query:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL
        +IFLRH+LHE LK EYLT+KDP  LW NLK+RYDHQKTVILPK RY+WMHLRLQDFK+VS+YN ALFKISS+L LCGEKIT+ +MLEKTF+TF+ASN+ L
Subjt:  MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFL

Query:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNNCGCGCGHDSGRIR---NNYFFHG
        QQQ RE  F +YSELISCLLVAEQNNELLM+NH+S+PTG+ PF EVNA++    G G G   GR R    N  +HG
Subjt:  QQQSREKGFKQYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNNCGCGCGHDSGRIR---NNYFFHG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTCCTTCGCCATGATCTCCACGAGGAATTGAAGATGGAATATTTAACAATAAAAGATCCCTGTATCTTGTGGAAGAATTTAAAACAGAGATATGATCATCAGAA
AACAGTCATTCTTCCTAAAACTCGTTATGAATGGATGCATTTGAGGCTCCAAGATTTCAAATCAGTAAGTGACTACAACTTCGCATTATTTAAAATCAGTTCAAAATTGT
TGTTATGCGGAGAGAAAATTACTGATGCGAATATGTTGGAGAAGACATTTTCTACATTTTATGCCTCAAATATGTTCCTGCAGCAGCAATCTCGAGAGAAAGGTTTTAAA
CAATATTCTGAATTAATTTCATGTCTTCTCGTGGCTGAACAAAATAATGAGCTATTGATGAAAAACCATGAATCTCAGCCAACTGGAACAACACCATTCTCTGAAGTGAA
TGCTTTAAATTTTAATAATTGTGGTTGTGGTTGTGGTCATGACAGTGGTAGAATAAGAAATAATTATTTTTTTCATGGTGTCATTCTAATCATCCAAATTTCAAAAGAAC
CACCCGAAATGATGATCATAAAGGAAAAGCTCCACAAGATGATGAGCATAAATGCTTCCGATGCGGGATGA
mRNA sequenceShow/hide mRNA sequence
AAAAGATTGGTGAAATTTGAAATTTCATTTTCCATAAAATCTCACTTTCTTTATTTTAGTTTATTTTAAGTTTATTTTATTTAATTTGGTTATTTTAATATTATAATTTC
TCGATTTTCGTGCTCCCGTTTTTCTGCCATTTTGCTCTTCAATTTTACGACACGTTATCAGCACGAGCTCTTGCCATTTTCCCATTGAAGGTAGGTTCTGAAGATGCCAA
GAACTTGGGGGAAACAATTAAAGAGGGAAATGCAACATCCATTCAAGAAAAAGCAAAAGTTATGATTTTCCTTCGCCATGATCTCCACGAGGAATTGAAGATGGAATATT
TAACAATAAAAGATCCCTGTATCTTGTGGAAGAATTTAAAACAGAGATATGATCATCAGAAAACAGTCATTCTTCCTAAAACTCGTTATGAATGGATGCATTTGAGGCTC
CAAGATTTCAAATCAGTAAGTGACTACAACTTCGCATTATTTAAAATCAGTTCAAAATTGTTGTTATGCGGAGAGAAAATTACTGATGCGAATATGTTGGAGAAGACATT
TTCTACATTTTATGCCTCAAATATGTTCCTGCAGCAGCAATCTCGAGAGAAAGGTTTTAAACAATATTCTGAATTAATTTCATGTCTTCTCGTGGCTGAACAAAATAATG
AGCTATTGATGAAAAACCATGAATCTCAGCCAACTGGAACAACACCATTCTCTGAAGTGAATGCTTTAAATTTTAATAATTGTGGTTGTGGTTGTGGTCATGACAGTGGT
AGAATAAGAAATAATTATTTTTTTCATGGTGTCATTCTAATCATCCAAATTTCAAAAGAACCACCCGAAATGATGATCATAAAGGAAAAGCTCCACAAGATGATGAGCAT
AAATGCTTCCGATGCGGGATGA
Protein sequenceShow/hide protein sequence
MIFLRHDLHEELKMEYLTIKDPCILWKNLKQRYDHQKTVILPKTRYEWMHLRLQDFKSVSDYNFALFKISSKLLLCGEKITDANMLEKTFSTFYASNMFLQQQSREKGFK
QYSELISCLLVAEQNNELLMKNHESQPTGTTPFSEVNALNFNNCGCGCGHDSGRIRNNYFFHGVILIIQISKEPPEMMIIKEKLHKMMSINASDAG