; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G014580 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G014580
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNADH-ubiquinone oxidoreductase chain 5
Genome locationCG_Chr09:26684819..26685959
RNA-Seq ExpressionClCG09G014580
SyntenyClCG09G014580
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0009536 - plastid (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0008289 - lipid binding (molecular function)
GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domainsIPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADL63522.1 NADH dehydrogenase subunit 5, partial [Alnus incana subsp. rugosa]1.6e-4686.21Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVIT AGAT SFLA
Subjt:  ALIVITSAGATMSFLA

ADL63631.1 NADH dehydrogenase subunit 5, partial [Juglans cinerea]1.6e-4686.21Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVIT AGAT SFLA
Subjt:  ALIVITSAGATMSFLA

KAE8009083.1 hypothetical protein FH972_005537 [Carpinus fangiana]1.6e-4686.21Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVIT AGAT SFLA
Subjt:  ALIVITSAGATMSFLA

KAG6621686.1 hypothetical protein I3842_Q010200 [Carya illinoinensis]1.6e-4686.21Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVIT AGAT SFLA
Subjt:  ALIVITSAGATMSFLA

YP_009941460.1 NADH dehydrogenase subunit 5 [Fagus sylvatica]1.6e-4686.21Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVIT AGAT SFLA
Subjt:  ALIVITSAGATMSFLA

TrEMBL top hitse value%identityAlignment
A0A5N6L1B2 Uncharacterized protein7.7e-4786.21Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVIT AGAT SFLA
Subjt:  ALIVITSAGATMSFLA

A0A5N6QSG6 Proton_antipo_M domain-containing protein7.7e-4786.21Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVIT AGAT SFLA
Subjt:  ALIVITSAGATMSFLA

A0A6A1WMY6 NADH-ubiquinone oxidoreductase chain 57.7e-4786.21Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVIT AGAT SFLA
Subjt:  ALIVITSAGATMSFLA

E5DL54 NADH dehydrogenase subunit 5 (Fragment)7.7e-4786.21Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVIT AGAT SFLA
Subjt:  ALIVITSAGATMSFLA

E5DLG3 NADH-ubiquinone oxidoreductase chain 5 (Fragment)7.7e-4786.21Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVIT AGAT SFLA
Subjt:  ALIVITSAGATMSFLA

SwissProt top hitse value%identityAlignment
P10330 NADH-ubiquinone oxidoreductase chain 54.5e-4480.17Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        I GCFTLFQT DFSTIFA ASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIG HTW PD MEGPT VSA  H A MVT G+FMIARC PLFE   T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVIT AGA  SFLA
Subjt:  ALIVITSAGATMSFLA

P26849 NADH-ubiquinone oxidoreductase chain 54.2e-3465.55Show/hide
Query:  ISGCFTLFQTADFSTIFARASA---PKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFEC
        I GCFT+FQT DFSTIFA ASA   P + ++ CNM  +AIT+ICIL+ IGA+GKS QIG HTW PD MEGPT VSA  H A MVT G+FMIARC PLFE 
Subjt:  ISGCFTLFQTADFSTIFARASA---PKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFEC

Query:  PFTALIVITSAGATMSFLA
           ALIVIT  GA  SF A
Subjt:  PFTALIVITSAGATMSFLA

P29388 NADH-ubiquinone oxidoreductase chain 51.1e-4277.59Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        I GCFTLFQT DFSTIFA AS P+NSWI CNMRLNAI+LICILL IGA+GKS QIG HTW PD MEGPT VSA  H A MVT G+FMIARC PLFE   T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVITSAGA  SFLA
Subjt:  ALIVITSAGATMSFLA

Q35639 NADH-ubiquinone oxidoreductase chain 5 (Fragment)2.0e-4485.19Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISG FTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTWSPD MEGPT VSA  H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSA
        ALIVITSA
Subjt:  ALIVITSA

Q37680 NADH-ubiquinone oxidoreductase chain 51.9e-4277.59Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        I GCFTLFQT DFSTIFA ASAP+N WI CNMRLNAITLICILL IGA+GKS QIG HTW PD MEGPT VSA  H A MVT G+FMIARC PLFE   T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVIT AGA  SFLA
Subjt:  ALIVITSAGATMSFLA

Arabidopsis top hitse value%identityAlignment
ATCG01010.1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein3.9e-1136.7Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        I G + +  + +F  +F       N  ++  + L  +TL   LL +G I KS Q   H W PD MEGPT +SA  H A MV  GIF++AR  PLF    +
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAG
         + +I+  G
Subjt:  ALIVITSAG

ATMG00060.1 NADH dehydrogenase subunit 5C2.1e-4985.34Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISG FTLFQT DFSTIFARASAP+NSWISCNMRLNAI+LICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVITSAGAT SFLA
Subjt:  ALIVITSAGATMSFLA

ATMG00513.1 NADH dehydrogenase 5A2.1e-4985.34Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISG FTLFQT DFSTIFARASAP+NSWISCNMRLNAI+LICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVITSAGAT SFLA
Subjt:  ALIVITSAGATMSFLA

ATMG00665.1 NADH dehydrogenase 5B2.1e-4985.34Show/hide
Query:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT
        ISG FTLFQT DFSTIFARASAP+NSWISCNMRLNAI+LICILLLIGA+GKS QIGSHTWSPD MEGPT VSAS H A MVT G+FMIARC PLFE P T
Subjt:  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFT

Query:  ALIVITSAGATMSFLA
        ALIVITSAGAT SFLA
Subjt:  ALIVITSAGATMSFLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATGTTGTTGGATATAACTCTCTTCAATTATTCCTGGGATGGGAGGGAGATTTCGGGTTGTTTTACTCTCTTTCAAACAGCAGACTTTTCCACCATTTTTGCTCG
TGCTAGTGCCCCCAAAAATTCTTGGATTTCTTGCAATATGAGATTGAATGCCATAACTCTGATTTGTATTTTACTTCTTATTGGTGCTATTGGGAAATCCACACAGATAG
GATCGCATACTTGGTCACCCGATACTATGGAGGGTCCTACTCTAGTATCTGCTTCGACTCATGTAGCTATTATGGTAACAACTGGCATTTTCATGATAGCAAGGTGCCCC
CCTTTATTTGAATGCCCGTTTACGGCTTTGATTGTTATTACTTCTGCAGGAGCTACGATGTCATTCCTTGCAAATGGTTTAGTTAAGATATGCCAAATTCCACCAAGTAT
ACAAATGGAACTTAACCATACATGTCCCCCAACTATATCTTCTGAGTTCCCCCACAAAAGTTGCTTTGACGGAGGGAAGTGGGCTTCATTCAATGGAATGTTTTGTTGGT
TCAGCTCAAGGGGTCAGTTATTCGACTTTTGCCAAAGAAGGCTATTATGGCCTCTTGTTCCGCTACTGTTAGGTATAGATAAGCAGGACCTCTTGGTCAACAACATAAGA
GAAGCGGGGATCCGCAAGAATCTTTTTCTATTCAGCCTCCTCCAACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAATGTTGTTGGATATAACTCTCTTCAATTATTCCTGGGATGGGAGGGAGATTTCGGGTTGTTTTACTCTCTTTCAAACAGCAGACTTTTCCACCATTTTTGCTCG
TGCTAGTGCCCCCAAAAATTCTTGGATTTCTTGCAATATGAGATTGAATGCCATAACTCTGATTTGTATTTTACTTCTTATTGGTGCTATTGGGAAATCCACACAGATAG
GATCGCATACTTGGTCACCCGATACTATGGAGGGTCCTACTCTAGTATCTGCTTCGACTCATGTAGCTATTATGGTAACAACTGGCATTTTCATGATAGCAAGGTGCCCC
CCTTTATTTGAATGCCCGTTTACGGCTTTGATTGTTATTACTTCTGCAGGAGCTACGATGTCATTCCTTGCAAATGGTTTAGTTAAGATATGCCAAATTCCACCAAGTAT
ACAAATGGAACTTAACCATACATGTCCCCCAACTATATCTTCTGAGTTCCCCCACAAAAGTTGCTTTGACGGAGGGAAGTGGGCTTCATTCAATGGAATGTTTTGTTGGT
TCAGCTCAAGGGGTCAGTTATTCGACTTTTGCCAAAGAAGGCTATTATGGCCTCTTGTTCCGCTACTGTTAGGTATAGATAAGCAGGACCTCTTGGTCAACAACATAAGA
GAAGCGGGGATCCGCAAGAATCTTTTTCTATTCAGCCTCCTCCAACTCTAG
Protein sequenceShow/hide protein sequence
MPMLLDITLFNYSWDGREISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCP
PLFECPFTALIVITSAGATMSFLANGLVKICQIPPSIQMELNHTCPPTISSEFPHKSCFDGGKWASFNGMFCWFSSRGQLFDFCQRRLLWPLVPLLLGIDKQDLLVNNIR
EAGIRKNLFLFSLLQL