CuGenDBv2

Gene ID	ClCG09G014665
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	general transcription factor 3C polypeptide 5-like
Genome location	CG_Chr09:26939885..26951657
RNA-Seq Expression	ClCG09G014665
Synteny	ClCG09G014665
Gene Ontology terms	GO:0006384 - transcription initiation from RNA polymerase III promoter (biological process) GO:0015074 - DNA integration (biological process) GO:0000127 - transcription factor TFIIIC complex (cellular component) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR019136 - Transcription factor IIIC subunit 5, HTH domain IPR040454 - Transcription factor IIIC subunit Tfc1/Sfc1

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142476.1 general transcription factor 3C polypeptide 5 isoform X2 [Cucumis sativus]

9.6e-123

83.45

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Query:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED
        MLDMGL+FSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKD +S+IYQRIDFRVP SLRSYCNSNASN+LCY HA ISAFQVFP+KFQTSLQLFEL+D
Subjt:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED

Query:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKLDANYAEEDE
        EYIQEEIRKPS EA CSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALL AASESFEKL+R DRKDCSKV    E EANA   +DDKLDA+YAEEDE
Subjt:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKLDANYAEEDE

Query:  EDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE
        E DG+GVESG+E L AYDD +MVGDDDE SL SHSYL M+DVSRTHLQELFGSF    EDG+K +DDGD S+EEYQIYEQD+DMDSD+D+
Subjt:  EDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE

XP_008465056.1 PREDICTED: general transcription factor 3C polypeptide 5-like isoform X1 [Cucumis melo]

9.6e-123

82.65

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Query:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED
        MLDMGL+FSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP SLRSYCNS+AS+KLCY HA I AFQVFP+KFQTSLQLFEL+D
Subjt:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED

Query:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKL-DANYAEED
        EYIQEEIRKPS EASCSYESGWFS+R LNCIRQRIMMRFLSVFPTAGAEALL AASE+FEKL+REDRKDCSKV    E EANA VI+DDKL DA+YAEED
Subjt:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKL-DANYAEED

Query:  ---EEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE
           +E+DGLGVESG+E L AYDD +MVGDDDE SLQSHSYL+M+D+SRTHLQELFGSF    EDG+K +DDGD S+EEYQIYEQD+DMDSDDD+
Subjt:  ---EEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE

XP_008465058.1 PREDICTED: general transcription factor 3C polypeptide 5-like isoform X2 [Cucumis melo]

9.6e-123

82.65

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Query:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED
        MLDMGL+FSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP SLRSYCNS+AS+KLCY HA I AFQVFP+KFQTSLQLFEL+D
Subjt:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED

Query:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKL-DANYAEED
        EYIQEEIRKPS EASCSYESGWFS+R LNCIRQRIMMRFLSVFPTAGAEALL AASE+FEKL+REDRKDCSKV    E EANA VI+DDKL DA+YAEED
Subjt:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKL-DANYAEED

Query:  ---EEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE
           +E+DGLGVESG+E L AYDD +MVGDDDE SLQSHSYL+M+D+SRTHLQELFGSF    EDG+K +DDGD S+EEYQIYEQD+DMDSDDD+
Subjt:  ---EEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE

XP_011655959.1 general transcription factor 3C polypeptide 5 isoform X1 [Cucumis sativus]

4.3e-123

84.19

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Query:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED
        MLDMGL+FSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKD +S+IYQRIDFRVP SLRSYCNSNASN+LCY HA ISAFQVFP+KFQTSLQLFEL+D
Subjt:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED

Query:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVIN-DDKLDANYAEED
        EYIQEEIRKPS EA CSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALL AASESFEKL+R DRKDCSKV    E EANAAV N DDKLDA+YAEED
Subjt:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVIN-DDKLDANYAEED

Query:  EEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE
        EE DG+GVESG+E L AYDD +MVGDDDE SL SHSYL M+DVSRTHLQELFGSF    EDG+K +DDGD S+EEYQIYEQD+DMDSD+D+
Subjt:  EEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE

XP_038888323.1 transcription factor tau subunit sfc1-like [Benincasa hispida]

9.2e-134

89.62

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Query:  MGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELEDEYI
        MGL+FSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKD DSRIYQRIDFRVPASLRSYCNSNASNKLCY HAEISAFQVFP KFQTSLQLFELEDEYI
Subjt:  MGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELEDEYI

Query:  QEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKLDANYAEEDEED-
        QEEIRKPS EASCSYESGWFSLRI+NCIRQRIMMRFLSVFPTAGAEALLRAASESFEKL+REDRK+CSKV  GGE E NAAVINDDKL+ANYAEEDEED 
Subjt:  QEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKLDANYAEEDEED-

Query:  -DGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQKIDDGDDSEEEYQIYEQDSDMDSDDDES
         DGLGVESGDE L AYD+ DMVGDDDEISLQSHSYLNM++VSRTHLQELFGSF    EDG K+DDGD SEEEYQIYEQD+DMDSDDD+S
Subjt:  -DGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQKIDDGDDSEEEYQIYEQDSDMDSDDDES

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV91 Uncharacterized protein

4.6e-123

83.45

Show/hide

Query:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED
        MLDMGL+FSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKD +S+IYQRIDFRVP SLRSYCNSNASN+LCY HA ISAFQVFP+KFQTSLQLFEL+D
Subjt:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED

Query:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKLDANYAEEDE
        EYIQEEIRKPS EA CSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALL AASESFEKL+R DRKDCSKV    E EANA   +DDKLDA+YAEEDE
Subjt:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKLDANYAEEDE

Query:  EDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE
        E DG+GVESG+E L AYDD +MVGDDDE SL SHSYL M+DVSRTHLQELFGSF    EDG+K +DDGD S+EEYQIYEQD+DMDSD+D+
Subjt:  EDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE

A0A1S3CMW8 general transcription factor 3C polypeptide 5-like isoform X2

4.6e-123

82.65

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Query:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED
        MLDMGL+FSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP SLRSYCNS+AS+KLCY HA I AFQVFP+KFQTSLQLFEL+D
Subjt:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED

Query:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKL-DANYAEED
        EYIQEEIRKPS EASCSYESGWFS+R LNCIRQRIMMRFLSVFPTAGAEALL AASE+FEKL+REDRKDCSKV    E EANA VI+DDKL DA+YAEED
Subjt:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKL-DANYAEED

Query:  ---EEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE
           +E+DGLGVESG+E L AYDD +MVGDDDE SLQSHSYL+M+D+SRTHLQELFGSF    EDG+K +DDGD S+EEYQIYEQD+DMDSDDD+
Subjt:  ---EEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE

A0A1S4E516 general transcription factor 3C polypeptide 5-like isoform X1

4.6e-123

82.65

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Query:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED
        MLDMGL+FSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP SLRSYCNS+AS+KLCY HA I AFQVFP+KFQTSLQLFEL+D
Subjt:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED

Query:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKL-DANYAEED
        EYIQEEIRKPS EASCSYESGWFS+R LNCIRQRIMMRFLSVFPTAGAEALL AASE+FEKL+REDRKDCSKV    E EANA VI+DDKL DA+YAEED
Subjt:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAAVINDDKL-DANYAEED

Query:  ---EEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE
           +E+DGLGVESG+E L AYDD +MVGDDDE SLQSHSYL+M+D+SRTHLQELFGSF    EDG+K +DDGD S+EEYQIYEQD+DMDSDDD+
Subjt:  ---EEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE

A0A5A7VAR4 Ty3/gypsy retrotransposon protein

3.9e-122

82.71

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Query:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED
        MLDMGL+FSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP SLRSYCNS+AS+KLCY HA I AFQVFP+KFQTSLQLFEL+D
Subjt:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED

Query:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAA-VINDDKL-DANYAEE
        EYIQEEIRKPS EASCSYESGWFS+R LNCIRQRIMMRFLSVFPTAGAEALL AASE+FEKL+REDRKDCSKV    E EANAA VI+DDKL DA+YAEE
Subjt:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKV-SGGEREANAA-VINDDKL-DANYAEE

Query:  D---EEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE
        D   +E+DGLGVESG+E L AYDD +MVGDDDE SLQSHSYL+M+D+SRTHLQELFGSF    EDG+K +DDGD S+EEYQIYEQD+DMDSDDD+
Subjt:  D---EEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQK-IDDGDDSEEEYQIYEQDSDMDSDDDE

A0A6J1JKL2 general transcription factor 3C polypeptide 5-like

3.4e-118

80.34

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Query:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED
        ML MGL F HGV RRLLSRIAYYFSSGPFQRFWIKKGYDPRKD DSR YQRIDFRVP SLRSYCNSNAS+++ Y H +I AFQVFP KFQTSLQLFELED
Subjt:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED

Query:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKVS-GGEREANAAVINDDKLDANYAEEDE
        EYIQEEI+KPS E SCSYESGWFSLRILNC+RQRIMMRFL VFPTA AE LLRAASE+FEKL+R+ +K C KV  GG+ +ANAAVINDDKL+ N  EEDE
Subjt:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKVS-GGEREANAAVINDDKLDANYAEEDE

Query:  EDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQKIDDGDDSEEEYQIYEQDSDMDSDDDES
          DGL VESGDE L  YD+ +MVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF    ED QK+DDGD SEEEYQIYEQDSD+DSDDD+S
Subjt:  EDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSF----EDGQKIDDGDDSEEEYQIYEQDSDMDSDDDES

SwissProt top hits

e value

%identity

Alignment

Q54GS8 General transcription factor 3C polypeptide 5

2.2e-05

37.5

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Query:  RRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRV-------PASLRSYCNSNASN
        +R+L  +A+ F  GP+++ W+K G+DPR  P++  YQ IDFR+       P++  S  N+N +N
Subjt:  RRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRV-------PASLRSYCNSNASN

Q8R2T8 General transcription factor 3C polypeptide 5

8.1e-08

48.98

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Query:  LRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLR
        L+ LL  +AYY  +GP++  WI+ GYDPRK PD++IYQ +DFR+   ++
Subjt:  LRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLR

Q9Y5Q8 General transcription factor 3C polypeptide 5

2.8e-08

51.02

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Query:  LRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLR
        L+ LL  IAYY  +GP++  WI+ GYDPRK+PD++IYQ +DFR+   ++
Subjt:  LRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLR

Arabidopsis top hits

e value

%identity

Alignment

AT3G49410.1 Transcription factor IIIC, subunit 5

6.5e-61

47.08

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Query:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED
        +LD GL  +H +L R L R AYYFSSGPF RFWIK+GYDPR DP+SR+YQR++FRVP  LR YC++NA+N       +I AF++FP K QT LQLFEL+D
Subjt:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED

Query:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRR-EDRKDCSKVS---------GGEREANAAVINDDKL
        EYIQ EIRKP  + +CS++SGWFS  +L+ +R R+ +RF+SVFP  G E + ++  E FE+  + + +K+  K S         G E       +N++ +
Subjt:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRR-EDRKDCSKVS---------GGEREANAAVINDDKL

Query:  DANYAEEDEEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFEDGQ-------KIDDGDDSEEEYQIYEQDS-------
        DAN   ED ED+ L  E  DEE    ++LDM   D+EISL SH YL+ ++ SRT+LQ LF SF   +        +DDG D   E+QIYE++S       
Subjt:  DANYAEEDEEDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFEDGQ-------KIDDGDDSEEEYQIYEQDS-------

Query:  DMDSDDDE
        D  +DDDE
Subjt:  DMDSDDDE

AT5G24450.1 Transcription factor IIIC, subunit 5

4.0e-58

45.52

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Query:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED
        +LD GL+ +H +L R L R AYYFS GPF RFWIK+GYDPRKDP+SR++QR++FRVP  L+ YC+SNA+NK      +I AF+VFP K QT LQLFEL+D
Subjt:  MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELED

Query:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRR-EDRKDCSKVSGGEREANAAVINDDKLDANYAEEDE
        EYIQ+EIRKP  + +C+Y++GWFS  +L+ +R R+ +RF+SVFP  G E + ++  E FE+  +   +KD  + S   +  +     D K   N     E
Subjt:  EYIQEEIRKPSVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRR-EDRKDCSKVSGGEREANAAVINDDKLDANYAEEDE

Query:  EDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFEDGQ-----KIDDGDDSEEEYQIYEQDSDMDSDDDE
        +DD +  +   E+L   D+ +   +DD+IS+ SH Y +M++ SRT+LQ LF  F           +D +DS+ EY IYEQ+S+   DD+E
Subjt:  EDDGLGVESGDEELGAYDDLDMVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFEDGQ-----KIDDGDDSEEEYQIYEQDSDMDSDDDE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTTGATATGGGTCTATCTTTTAGCCATGGAGTGTTGAGAAGGCTTCTTTCTAGAATTGCATACTACTTTTCCAGTGGACCTTTCCAAAGATTTTGGATAAAAAAAGG
TTACGATCCTCGAAAAGATCCTGATTCTCGCATATACCAACGAATTGATTTTCGAGTTCCTGCGTCATTACGAAGTTATTGCAATTCCAATGCTTCCAACAAGTTGTGTT
ACAGACATGCAGAGATAAGTGCATTTCAAGTTTTTCCTCAAAAGTTCCAAACATCATTGCAACTTTTTGAACTTGAAGATGAGTATATTCAAGAAGAGATAAGAAAACCC
TCTGTGGAAGCATCGTGTTCGTATGAATCCGGCTGGTTTTCTCTGCGTATCCTAAATTGCATCCGGCAACGAATCATGATGAGGTTTTTATCAGTGTTCCCAACGGCAGG
TGCTGAAGCTTTACTCAGAGCAGCCTCTGAAAGCTTTGAAAAATTGAGGAGGGAGGATAGAAAAGACTGCTCAAAGGTGTCAGGAGGGGAACGTGAAGCCAATGCAGCTG
TGATCAACGATGACAAACTGGATGCAAATTATGCCGAAGAAGATGAAGAAGACGACGGGCTAGGAGTTGAGAGTGGTGATGAAGAATTAGGTGCATATGACGATTTAGAT
ATGGTTGGTGACGATGACGAGATTTCTCTGCAGTCACATTCATATTTAAACATGGACGATGTTTCAAGAACACATTTGCAAGAATTGTTTGGTAGCTTTGAAGATGGCCA
GAAGATTGACGATGGAGATGACAGCGAGGAAGAATATCAAATATATGAACAAGATAGTGATATGGACTCTGACGACGATGAATCATAG

mRNA sequence

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Protein sequence

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MLDMGLSFSHGVLRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSYCNSNASNKLCYRHAEISAFQVFPQKFQTSLQLFELEDEYIQEEIRKP
SVEASCSYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLRREDRKDCSKVSGGEREANAAVINDDKLDANYAEEDEEDDGLGVESGDEELGAYDDLD
MVGDDDEISLQSHSYLNMDDVSRTHLQELFGSFEDGQKIDDGDDSEEEYQIYEQDSDMDSDDDES

ClCG09G014665 (gene) of Watermelon (Charleston Gray) v2.5 genome