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ClCG09G015100 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G015100
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationCG_Chr09:28436757..28446142
RNA-Seq ExpressionClCG09G015100
SyntenyClCG09G015100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066908.1 mitochondrial phosphate carrier protein 3 [Cucumis melo var. makuwa]1.4e-2333.83Show/hide
Query:  GVEGRILEPFKVGAKEVNLSHLQFADDTIFFCLGKEESFLILNHTLGFFEAMSGLNINR------IYSLRVTR------------ELSPFGMFLQRRLGR
        GV+G I+E FK+G  EV LSHLQFADDT+ FC GKEESFLIL H + FFE  SGL INR      ++ +   +            E+  F  F  R L R
Subjt:  GVEGRILEPFKVGAKEVNLSHLQFADDTIFFCLGKEESFLILNHTLGFFEAMSGLNINR------IYSLRVTR------------ELSPFGMFLQRRLGR

Query:  AH-------------------------------LFQFARVLEKLDVEEGKGSHLVGEKECACLECESC----GGFYLQVFFQAYAQPVLL----------
         +                               L     +L ++ +  G+     GE        +S     GG   QV F  +   VLL          
Subjt:  AH-------------------------------LFQFARVLEKLDVEEGKGSHLVGEKECACLECESC----GGFYLQVFFQAYAQPVLL----------

Query:  -----------WNDLLQQFDISLAKQRDVCLLIGEFLLHPPFKEKGCFLLWTGVCAILWDLLGKRNNSV
                   W+   Q+F  S A  R V  +I EFLLH PF++KG FL   GVCA++WD+ GKRN+ V
Subjt:  -----------WNDLLQQFDISLAKQRDVCLLIGEFLLHPPFKEKGCFLLWTGVCAILWDLLGKRNNSV

RVW78844.1 hypothetical protein CK203_043107, partial [Vitis vinifera]1.5e-1743.8Show/hide
Query:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVFG-----------------GVEGRILEPFKVGAKEVNLSHLQFADDTIFFCLGKEE
        L ANE +++ +   +EGV+FKIDF+KAYDHV WDFLD V++KK F                    E  +LE F+VG     ++HLQFADDTI F   +EE
Subjt:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVFG-----------------GVEGRILEPFKVGAKEVNLSHLQFADDTIFFCLGKEE

Query:  SFLILNHTLGFFEAMSGLNIN
         F  L   L  F  +SGL +N
Subjt:  SFLILNHTLGFFEAMSGLNIN

RVW78846.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.9e-1838.24Show/hide
Query:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVF----------------------GGVEG---------RILEPFKVGAKEVNLSHLQ
        L ANE +++ +   +EGV+FKIDF+KAYDHV+WDFLD VM+KK F                      G  +G          + E FKVG     +SHLQ
Subjt:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVF----------------------GGVEG---------RILEPFKVGAKEVNLSHLQ

Query:  FADDTIFFCLGKEESFLILNHTLGFFEAMSGLNINRIYSLRVTRELSPFGMFLQRRLGRAHLFQFARVLE
        FADDTIFF   +EE  L L   L  F  +SGL +N   S       + +G+     LG+ HL + A +L+
Subjt:  FADDTIFFCLGKEESFLILNHTLGFFEAMSGLNINRIYSLRVTRELSPFGMFLQRRLGRAHLFQFARVLE

RVW81815.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.5e-1738.65Show/hide
Query:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVF----------------------GGVEG--RILEPFKVGAKEVNLSHLQFADDTIF
        L ANE +++ R   +EGV+FKIDF+KAYDHV WDFLD+V++KK F                      G  +G   +LE F+VG     +SHLQF+DDTIF
Subjt:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVF----------------------GGVEG--RILEPFKVGAKEVNLSHLQFADDTIF

Query:  FCLGKEESFLILNHTLGFFEAMSGLNINRIYSLRVTRELSPFGMFLQRRLGRAHLFQFARVLE
        F   +EE    L   L  F  +SGL +N   S       + +G+     L +AH+ + A  LE
Subjt:  FCLGKEESFLILNHTLGFFEAMSGLNINRIYSLRVTRELSPFGMFLQRRLGRAHLFQFARVLE

RVW93986.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.5e-1741.79Show/hide
Query:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVF----------------------GGVEGRI--------LEPFKVGAKEVNLSHLQF
        L  NE +++ R   +EGV+FKIDF+KAYDHV+WDFLD V++KK F                      G ++G +        LE F+V      +SHLQF
Subjt:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVF----------------------GGVEGRI--------LEPFKVGAKEVNLSHLQF

Query:  ADDTIFFCLGKEESFLILNHTLGFFEAMSGLNIN
        ADDTIFF   +EE  L LN  L  F  +SGL +N
Subjt:  ADDTIFFCLGKEESFLILNHTLGFFEAMSGLNIN

TrEMBL top hitse value%identityAlignment
A0A438CRE7 Transposon TX1 uncharacterized 149 kDa protein1.2e-1737.28Show/hide
Query:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVFG------------------------------GVEGRILEPFKVGAKEVNLSHLQF
        L ANE +++ R   +EGV+FKIDF+KAYDHV WDFLD V++KK F                                 E  +LE F+VG     +SHLQF
Subjt:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVFG------------------------------GVEGRILEPFKVGAKEVNLSHLQF

Query:  ADDTIFFCLGKEESFLILNHTLGFFEAMSGLNINRIYSLRVTRELSPFGMFLQRRLGRAHLFQFARVLE
        ADDTIFF   +EE    L   L  F  +SGL +N         + S +G+     L +AHL + A +L+
Subjt:  ADDTIFFCLGKEESFLILNHTLGFFEAMSGLNINRIYSLRVTRELSPFGMFLQRRLGRAHLFQFARVLE

A0A438H2J4 Reverse transcriptase domain-containing protein (Fragment)7.0e-1843.8Show/hide
Query:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVFG-----------------GVEGRILEPFKVGAKEVNLSHLQFADDTIFFCLGKEE
        L ANE +++ +   +EGV+FKIDF+KAYDHV WDFLD V++KK F                    E  +LE F+VG     ++HLQFADDTI F   +EE
Subjt:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVFG-----------------GVEGRILEPFKVGAKEVNLSHLQFADDTIFFCLGKEE

Query:  SFLILNHTLGFFEAMSGLNIN
         F  L   L  F  +SGL +N
Subjt:  SFLILNHTLGFFEAMSGLNIN

A0A438H2J5 Transposon TX1 uncharacterized 149 kDa protein1.4e-1838.24Show/hide
Query:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVF----------------------GGVEG---------RILEPFKVGAKEVNLSHLQ
        L ANE +++ +   +EGV+FKIDF+KAYDHV+WDFLD VM+KK F                      G  +G          + E FKVG     +SHLQ
Subjt:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVF----------------------GGVEG---------RILEPFKVGAKEVNLSHLQ

Query:  FADDTIFFCLGKEESFLILNHTLGFFEAMSGLNINRIYSLRVTRELSPFGMFLQRRLGRAHLFQFARVLE
        FADDTIFF   +EE  L L   L  F  +SGL +N   S       + +G+     LG+ HL + A +L+
Subjt:  FADDTIFFCLGKEESFLILNHTLGFFEAMSGLNINRIYSLRVTRELSPFGMFLQRRLGRAHLFQFARVLE

A0A438IB95 Transposon TX1 uncharacterized 149 kDa protein1.2e-1741.79Show/hide
Query:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVF----------------------GGVEGRI--------LEPFKVGAKEVNLSHLQF
        L  NE +++ R   +EGV+FKIDF+KAYDHV+WDFLD V++KK F                      G ++G +        LE F+V      +SHLQF
Subjt:  LTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVF----------------------GGVEGRI--------LEPFKVGAKEVNLSHLQF

Query:  ADDTIFFCLGKEESFLILNHTLGFFEAMSGLNIN
        ADDTIFF   +EE  L LN  L  F  +SGL +N
Subjt:  ADDTIFFCLGKEESFLILNHTLGFFEAMSGLNIN

A0A5A7VGR5 Mitochondrial phosphate carrier protein 36.6e-2433.83Show/hide
Query:  GVEGRILEPFKVGAKEVNLSHLQFADDTIFFCLGKEESFLILNHTLGFFEAMSGLNINR------IYSLRVTR------------ELSPFGMFLQRRLGR
        GV+G I+E FK+G  EV LSHLQFADDT+ FC GKEESFLIL H + FFE  SGL INR      ++ +   +            E+  F  F  R L R
Subjt:  GVEGRILEPFKVGAKEVNLSHLQFADDTIFFCLGKEESFLILNHTLGFFEAMSGLNINR------IYSLRVTR------------ELSPFGMFLQRRLGR

Query:  AH-------------------------------LFQFARVLEKLDVEEGKGSHLVGEKECACLECESC----GGFYLQVFFQAYAQPVLL----------
         +                               L     +L ++ +  G+     GE        +S     GG   QV F  +   VLL          
Subjt:  AH-------------------------------LFQFARVLEKLDVEEGKGSHLVGEKECACLECESC----GGFYLQVFFQAYAQPVLL----------

Query:  -----------WNDLLQQFDISLAKQRDVCLLIGEFLLHPPFKEKGCFLLWTGVCAILWDLLGKRNNSV
                   W+   Q+F  S A  R V  +I EFLLH PF++KG FL   GVCA++WD+ GKRN+ V
Subjt:  -----------WNDLLQQFDISLAKQRDVCLLIGEFLLHPPFKEKGCFLLWTGVCAILWDLLGKRNNSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTTTTCTCAAACTCAGGCCCGACAGCGGACATGAGCAAGGCAAGATGTGAACAACTTGCAGCTAAATTTTATGGGCCATACAAAGTGTTGGAACGTGTGGGAGT
CATGGCCTATAAGCTGGAGTTACCACCAGAAGCATGCATACATGATGTTTTTCATGTTTCCCAGCTGAAGAAGTGTATCAGGACAGTTGCTCATGTCCAAAATCATCCAC
CCAGTCTCTCGGATGAGTTTGAATTACAGGAGCTCGATGAGAAGGAGGTGGAGGGCCTTTTGGACCAGGCCATGAAAGCTAAAAAGGATGGCCTTAAGAGGGAGATGGCT
AGTGGCAGGAGAAATATGAACTTCATAGGTCCTTTGATCAAAGGTAATGGGGAGAGGACCTTTAGTGATAAGGAAGTGGAAGAGGAGGCAAATTCTTGCGCTCTCACTGC
CAATGAGGCTATTGAGGACTATAGAGTTCAGAACAAGGAGGGTGTGATTTTTAAAATTGATTTCGACAAAGCCTACGACCATGTTAATTGGGATTTTCTAGACAGAGTGA
TGGACAAGAAAGTTTTTGGAGGGGTGGAAGGTAGAATCCTTGAGCCTTTTAAAGTGGGAGCGAAGGAAGTGAATCTGTCGCATTTACAATTTGCTGACGATACGATATTT
TTCTGTTTGGGTAAAGAAGAGTCTTTCCTTATTTTGAACCATACTTTGGGCTTCTTTGAGGCAATGTCAGGGCTCAACATCAATAGGATCTACTCCTTGAGGGTAACCCG
AGAGCTATCTCCTTTTGGGATGTTCCTTCAGAGAAGATTAGGAAGAGCGCACCTGTTTCAGTTTGCAAGAGTGCTTGAGAAACTAGATGTGGAGGAAGGGAAAGGTTCTC
ATTTGGTTGGGGAGAAGGAATGTGCGTGTTTGGAGTGCGAGTCCTGCGGAGGGTTTTACTTGCAAGTCTTTTTTCAGGCTTATGCTCAACCCGTTCTCCTGTGGAACGAT
CTCCTTCAGCAGTTTGATATCTCATTGGCTAAGCAAAGAGATGTCTGCTTGTTGATTGGGGAGTTCCTTCTCCATCCGCCTTTCAAAGAGAAAGGTTGTTTTCTTTTATG
GACTGGGGTGTGTGCAATCTTGTGGGACCTTTTGGGGAAGAGGAACAATAGTGTTCAGGGGAGTGGAGAGGAACCCTGGGGAGGTGTTTGGTCCTTGAATTACCAAGGCT
TCCTTTTTCAAAAAACTCCCAAGTCTCAACATTTTTCAGAGGATGATTCTTCAATTAGCATAAGCAATGACGAAAATACAGAAATCTTAGCTTTCAAATCCATTCCAGTT
GAGGATCAGCTAGAAGAAGTCCAAGGGACAGAACTTGCTGCACTCTTTCAAAGCCCAGCTCTTAAAAAGTTTGATCAGATTTCTAGTGAGCTTTTTACTCCAATATCCCC
TTCTTTAATTCCCTCAAAATTTTCCTCTTTGATTAAAGGACGTGGTCTGGTTTTTGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGTTTTTCTCAAACTCAGGCCCGACAGCGGACATGAGCAAGGCAAGATGTGAACAACTTGCAGCTAAATTTTATGGGCCATACAAAGTGTTGGAACGTGTGGGAGT
CATGGCCTATAAGCTGGAGTTACCACCAGAAGCATGCATACATGATGTTTTTCATGTTTCCCAGCTGAAGAAGTGTATCAGGACAGTTGCTCATGTCCAAAATCATCCAC
CCAGTCTCTCGGATGAGTTTGAATTACAGGAGCTCGATGAGAAGGAGGTGGAGGGCCTTTTGGACCAGGCCATGAAAGCTAAAAAGGATGGCCTTAAGAGGGAGATGGCT
AGTGGCAGGAGAAATATGAACTTCATAGGTCCTTTGATCAAAGGTAATGGGGAGAGGACCTTTAGTGATAAGGAAGTGGAAGAGGAGGCAAATTCTTGCGCTCTCACTGC
CAATGAGGCTATTGAGGACTATAGAGTTCAGAACAAGGAGGGTGTGATTTTTAAAATTGATTTCGACAAAGCCTACGACCATGTTAATTGGGATTTTCTAGACAGAGTGA
TGGACAAGAAAGTTTTTGGAGGGGTGGAAGGTAGAATCCTTGAGCCTTTTAAAGTGGGAGCGAAGGAAGTGAATCTGTCGCATTTACAATTTGCTGACGATACGATATTT
TTCTGTTTGGGTAAAGAAGAGTCTTTCCTTATTTTGAACCATACTTTGGGCTTCTTTGAGGCAATGTCAGGGCTCAACATCAATAGGATCTACTCCTTGAGGGTAACCCG
AGAGCTATCTCCTTTTGGGATGTTCCTTCAGAGAAGATTAGGAAGAGCGCACCTGTTTCAGTTTGCAAGAGTGCTTGAGAAACTAGATGTGGAGGAAGGGAAAGGTTCTC
ATTTGGTTGGGGAGAAGGAATGTGCGTGTTTGGAGTGCGAGTCCTGCGGAGGGTTTTACTTGCAAGTCTTTTTTCAGGCTTATGCTCAACCCGTTCTCCTGTGGAACGAT
CTCCTTCAGCAGTTTGATATCTCATTGGCTAAGCAAAGAGATGTCTGCTTGTTGATTGGGGAGTTCCTTCTCCATCCGCCTTTCAAAGAGAAAGGTTGTTTTCTTTTATG
GACTGGGGTGTGTGCAATCTTGTGGGACCTTTTGGGGAAGAGGAACAATAGTGTTCAGGGGAGTGGAGAGGAACCCTGGGGAGGTGTTTGGTCCTTGAATTACCAAGGCT
TCCTTTTTCAAAAAACTCCCAAGTCTCAACATTTTTCAGAGGATGATTCTTCAATTAGCATAAGCAATGACGAAAATACAGAAATCTTAGCTTTCAAATCCATTCCAGTT
GAGGATCAGCTAGAAGAAGTCCAAGGGACAGAACTTGCTGCACTCTTTCAAAGCCCAGCTCTTAAAAAGTTTGATCAGATTTCTAGTGAGCTTTTTACTCCAATATCCCC
TTCTTTAATTCCCTCAAAATTTTCCTCTTTGATTAAAGGACGTGGTCTGGTTTTTGCGTAG
Protein sequenceShow/hide protein sequence
MWFFSNSGPTADMSKARCEQLAAKFYGPYKVLERVGVMAYKLELPPEACIHDVFHVSQLKKCIRTVAHVQNHPPSLSDEFELQELDEKEVEGLLDQAMKAKKDGLKREMA
SGRRNMNFIGPLIKGNGERTFSDKEVEEEANSCALTANEAIEDYRVQNKEGVIFKIDFDKAYDHVNWDFLDRVMDKKVFGGVEGRILEPFKVGAKEVNLSHLQFADDTIF
FCLGKEESFLILNHTLGFFEAMSGLNINRIYSLRVTRELSPFGMFLQRRLGRAHLFQFARVLEKLDVEEGKGSHLVGEKECACLECESCGGFYLQVFFQAYAQPVLLWND
LLQQFDISLAKQRDVCLLIGEFLLHPPFKEKGCFLLWTGVCAILWDLLGKRNNSVQGSGEEPWGGVWSLNYQGFLFQKTPKSQHFSEDDSSISISNDENTEILAFKSIPV
EDQLEEVQGTELAALFQSPALKKFDQISSELFTPISPSLIPSKFSSLIKGRGLVFA