; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G015590 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G015590
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDNA repair protein XRCC4
Genome locationCG_Chr09:30311872..30315755
RNA-Seq ExpressionClCG09G015590
SyntenyClCG09G015590
Gene Ontology termsGO:0006303 - double-strand break repair via nonhomologous end joining (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0010165 - response to X-ray (biological process)
GO:0051103 - DNA ligation involved in DNA repair (biological process)
GO:0051351 - positive regulation of ligase activity (biological process)
GO:0005958 - DNA-dependent protein kinase-DNA ligase 4 complex (cellular component)
GO:0032807 - DNA ligase IV complex (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR010585 - DNA repair protein XRCC4
IPR014751 - DNA repair protein XRCC4-like, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571850.1 DNA repair protein XRCC4, partial [Cucurbita argyrosperma subsp. sororia]2.7e-10374.72Show/hide
Query:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY
        M+A RHTCLKLEVPTN QP+ R SIFVKGTW  HRFDLSITDGLNAWTC+             ATEDEVRLRA QWDQEPS+YV+LAERYLGFQQP SVY
Subjt:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY

Query:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ
        GF+D GNGDKR                       LSWTF+KEGMKLEWRWKC+ ASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFE+LKVESEKCLAQ
Subjt:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ

Query:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN
        SE+IC+EKVEFETA+YAKFLNVLN KKAKLREYRDQ  KQTTT SKLKQ++  SDKTESF+D+SDAEKN
Subjt:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN

XP_004136882.1 DNA repair protein XRCC4 [Cucumis sativus]1.1e-10979.18Show/hide
Query:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY
        M+A RHTCLKLEVPTN QPNERSSIFVKGTWNH RFDLSITDG +AWTC+             ATEDEVRLRAAQWDQEPS+YVALAERYLGFQQPGS+Y
Subjt:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY

Query:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ
         F+DAGNG KR                       LSWTFDKEGMKLEWRWKCQPASDNKTTTAGIL+FLMDANIRLSEEVVRK QS ERLK ESEKCLAQ
Subjt:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ

Query:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN
        SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQL++QT TGSKLKQEEYSSDKTESF+DESDAEKN
Subjt:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN

XP_008455175.1 PREDICTED: DNA repair protein XRCC4 [Cucumis melo]2.5e-11280.67Show/hide
Query:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY
        M+A RHTCLKLEVPTN QP+ERSSIFVKGTWNHHRFDLSITDGL+AWTC+             ATEDEVRLRAAQWDQEPS+YVALAERYLGFQQPGS+Y
Subjt:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY

Query:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ
        GF+DAGNG KR                       LSWTFDKEGMKLEWRWKCQPASDNKTTTA IL+FLMDANIRLSEEVVRKTQS ERLK ESEKCLAQ
Subjt:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ

Query:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN
        SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQL+KQTTTGSKLKQEEYSSDKTESF+DESDAEKN
Subjt:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN

XP_022952201.1 DNA repair protein XRCC4 [Cucurbita moschata]2.7e-10374.72Show/hide
Query:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY
        M+A RHTCLKLEVPTN QP+ R SIFVKGTW  HRFDLSITDGLNAWTC+             ATEDEVRLRA QWDQEPS+YV+LAERYLGFQQP SVY
Subjt:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY

Query:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ
        GF+D GNGDKR                       LSWTF+KEGMKLEWRWKC+ ASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFE+LKVESEKCLAQ
Subjt:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ

Query:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN
        SE+IC+EKVEFETA+YAKFLNVLN KKAKLREYRDQ  KQTTT SKLKQ++  SDKTESF+D+SDAEKN
Subjt:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN

XP_038888651.1 DNA repair protein XRCC4 [Benincasa hispida]2.2e-11380.67Show/hide
Query:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY
        M+ATRHTCLKLEVPTN QPN+RSSIFVKGTWNHH FDLSITDGLNAW+C+             ATEDEV LRAAQWDQEPS+YVALAERYLGFQQPGSVY
Subjt:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY

Query:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ
        GF+DAGNGD+R                       LSWTFDKEGMKLEWRWKC+PASDNKTTTAGILDFLMDANIRLSEEVVRKTQ FERLK ESE+CLAQ
Subjt:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ

Query:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN
        SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQL+KQTTTGSKLKQEEYSSDKTESF+DESDAEKN
Subjt:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN

TrEMBL top hitse value%identityAlignment
A0A0A0K2L2 Uncharacterized protein5.6e-11079.18Show/hide
Query:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY
        M+A RHTCLKLEVPTN QPNERSSIFVKGTWNH RFDLSITDG +AWTC+             ATEDEVRLRAAQWDQEPS+YVALAERYLGFQQPGS+Y
Subjt:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY

Query:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ
         F+DAGNG KR                       LSWTFDKEGMKLEWRWKCQPASDNKTTTAGIL+FLMDANIRLSEEVVRK QS ERLK ESEKCLAQ
Subjt:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ

Query:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN
        SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQL++QT TGSKLKQEEYSSDKTESF+DESDAEKN
Subjt:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN

A0A1S3BZW1 DNA repair protein XRCC41.2e-11280.67Show/hide
Query:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY
        M+A RHTCLKLEVPTN QP+ERSSIFVKGTWNHHRFDLSITDGL+AWTC+             ATEDEVRLRAAQWDQEPS+YVALAERYLGFQQPGS+Y
Subjt:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY

Query:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ
        GF+DAGNG KR                       LSWTFDKEGMKLEWRWKCQPASDNKTTTA IL+FLMDANIRLSEEVVRKTQS ERLK ESEKCLAQ
Subjt:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ

Query:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN
        SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQL+KQTTTGSKLKQEEYSSDKTESF+DESDAEKN
Subjt:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN

A0A5A7SK69 DNA repair protein XRCC41.2e-11280.67Show/hide
Query:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY
        M+A RHTCLKLEVPTN QP+ERSSIFVKGTWNHHRFDLSITDGL+AWTC+             ATEDEVRLRAAQWDQEPS+YVALAERYLGFQQPGS+Y
Subjt:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY

Query:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ
        GF+DAGNG KR                       LSWTFDKEGMKLEWRWKCQPASDNKTTTA IL+FLMDANIRLSEEVVRKTQS ERLK ESEKCLAQ
Subjt:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ

Query:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN
        SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQL+KQTTTGSKLKQEEYSSDKTESF+DESDAEKN
Subjt:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN

A0A6J1GJL0 DNA repair protein XRCC41.3e-10374.72Show/hide
Query:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY
        M+A RHTCLKLEVPTN QP+ R SIFVKGTW  HRFDLSITDGLNAWTC+             ATEDEVRLRA QWDQEPS+YV+LAERYLGFQQP SVY
Subjt:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY

Query:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ
        GF+D GNGDKR                       LSWTF+KEGMKLEWRWKC+ ASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFE+LKVESEKCLAQ
Subjt:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ

Query:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN
        SE+IC+EKVEFETA+YAKFLNVLN KKAKLREYRDQ  KQTTT SKLKQ++  SDKTESF+D+SDAEKN
Subjt:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN

A0A6J1I7A5 DNA repair protein XRCC4 isoform X11.1e-10274.35Show/hide
Query:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY
        M+A RHTCLKLEVPTN QP+ R SIFVKGTW  HRFDLSITDGLNAWTC+             ATEDEVRLRA QWDQEPS+YV LAERYLGFQQP SVY
Subjt:  MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVY

Query:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ
         F+D GNGDKR                       LSWTF+KEGMKLEWRWKC+ ASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFE+LKVESEKCLAQ
Subjt:  GFSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQ

Query:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN
        SE+IC+EKVEFETA+YAKFLNVLN KKAKLREYRDQ  KQTTT SKLKQ++  SDKTESF+D+SDAEKN
Subjt:  SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN

SwissProt top hitse value%identityAlignment
Q682V0 DNA repair protein XRCC41.3e-6854.28Show/hide
Query:  EATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVYG
        E T+HTCL+LE+      +    IFVKGTW++ RFD+S+TDG ++W C              ATE+EV  RAAQWDQ  SEY+ LAE+YLGFQQP SVY 
Subjt:  EATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVYG

Query:  FSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQS
        FSDA  G KR                       LSWTF+KEG KLEWRWKC+P+ D+K  T GILDFLM+ANIRLSEEVV KT+SFE+++ E+E+CLAQ 
Subjt:  FSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQS

Query:  EKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESF-NDESDAEKN
        EK+CDEK EFE+A YAKFL+VLNAKKAKLR  RD+         ++ +EE S+DK ESF +  SD EK+
Subjt:  EKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESF-NDESDAEKN

Arabidopsis top hitse value%identityAlignment
AT1G61410.1 DNA double-strand break repair and VJ recombination XRCC41.1e-2059.41Show/hide
Query:  MDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESF-NDESDAEK
        M+ANIRLSEEVV KT+SFE++K E+E+CLAQ EK+CDEK EFE A YAKFL+VLNAKKAKLR  RD+         +  +EE S+ K ESF +  SD E+
Subjt:  MDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESF-NDESDAEK

Query:  N
        +
Subjt:  N

AT3G23100.1 homolog of human DNA ligase iv-binding protein XRCC49.5e-7054.28Show/hide
Query:  EATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVYG
        E T+HTCL+LE+      +    IFVKGTW++ RFD+S+TDG ++W C              ATE+EV  RAAQWDQ  SEY+ LAE+YLGFQQP SVY 
Subjt:  EATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVYG

Query:  FSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQS
        FSDA  G KR                       LSWTF+KEG KLEWRWKC+P+ D+K  T GILDFLM+ANIRLSEEVV KT+SFE+++ E+E+CLAQ 
Subjt:  FSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQS

Query:  EKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESF-NDESDAEKN
        EK+CDEK EFE+A YAKFL+VLNAKKAKLR  RD+         ++ +EE S+DK ESF +  SD EK+
Subjt:  EKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESF-NDESDAEKN

AT3G23100.2 homolog of human DNA ligase iv-binding protein XRCC49.5e-7054.28Show/hide
Query:  EATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVYG
        E T+HTCL+LE+      +    IFVKGTW++ RFD+S+TDG ++W C              ATE+EV  RAAQWDQ  SEY+ LAE+YLGFQQP SVY 
Subjt:  EATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVYG

Query:  FSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQS
        FSDA  G KR                       LSWTF+KEG KLEWRWKC+P+ D+K  T GILDFLM+ANIRLSEEVV KT+SFE+++ E+E+CLAQ 
Subjt:  FSDAGNGDKRVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQS

Query:  EKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESF-NDESDAEKN
        EK+CDEK EFE+A YAKFL+VLNAKKAKLR  RD+         ++ +EE S+DK ESF +  SD EK+
Subjt:  EKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESF-NDESDAEKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAACCAGGCACACATGCTTGAAGCTTGAAGTACCAACCAACGTGCAGCCGAACGAAAGAAGCTCCATCTTCGTCAAAGGCACTTGGAATCATCACCGCTTCGA
TCTCTCCATCACCGACGGCCTCAACGCTTGGACGTGTTATGGTGCCATTTCTGAAACTACCACTCAGTTAACTTCACTTGCAACGGAGGACGAGGTTCGATTACGCGCTG
CACAATGGGACCAAGAACCATCGGAATATGTGGCCTTGGCCGAGCGCTATCTAGGGTTTCAACAGCCTGGTTCGGTCTATGGCTTTTCCGATGCTGGAAATGGGGACAAG
AGGGTTTGTGCTTATTCCGTTTCATATCCTTCTTTGCTTCTTTTTTTTTCTCCCTTAGTCGATACTGATGAGCTTTCTTGGACATTTGACAAAGAAGGGATGAAGTTAGA
ATGGCGATGGAAGTGTCAACCAGCGTCTGATAATAAGACAACTACAGCAGGAATATTGGACTTTCTCATGGATGCAAACATAAGGCTGAGCGAAGAGGTTGTGAGAAAAA
CTCAATCATTTGAGAGGCTGAAGGTGGAGTCTGAGAAGTGTTTGGCTCAGAGCGAGAAGATTTGTGATGAAAAGGTGGAGTTTGAAACTGCAATATACGCAAAGTTTCTA
AATGTCTTGAACGCAAAGAAGGCAAAACTTAGAGAGTACCGAGATCAGCTTACAAAACAGACGACTACTGGTAGCAAACTAAAACAGGAAGAGTACTCCTCTGATAAAAC
CGAATCTTTCAACGATGAAAGTGATGCAGAAAAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAACCAGGCACACATGCTTGAAGCTTGAAGTACCAACCAACGTGCAGCCGAACGAAAGAAGCTCCATCTTCGTCAAAGGCACTTGGAATCATCACCGCTTCGA
TCTCTCCATCACCGACGGCCTCAACGCTTGGACGTGTTATGGTGCCATTTCTGAAACTACCACTCAGTTAACTTCACTTGCAACGGAGGACGAGGTTCGATTACGCGCTG
CACAATGGGACCAAGAACCATCGGAATATGTGGCCTTGGCCGAGCGCTATCTAGGGTTTCAACAGCCTGGTTCGGTCTATGGCTTTTCCGATGCTGGAAATGGGGACAAG
AGGGTTTGTGCTTATTCCGTTTCATATCCTTCTTTGCTTCTTTTTTTTTCTCCCTTAGTCGATACTGATGAGCTTTCTTGGACATTTGACAAAGAAGGGATGAAGTTAGA
ATGGCGATGGAAGTGTCAACCAGCGTCTGATAATAAGACAACTACAGCAGGAATATTGGACTTTCTCATGGATGCAAACATAAGGCTGAGCGAAGAGGTTGTGAGAAAAA
CTCAATCATTTGAGAGGCTGAAGGTGGAGTCTGAGAAGTGTTTGGCTCAGAGCGAGAAGATTTGTGATGAAAAGGTGGAGTTTGAAACTGCAATATACGCAAAGTTTCTA
AATGTCTTGAACGCAAAGAAGGCAAAACTTAGAGAGTACCGAGATCAGCTTACAAAACAGACGACTACTGGTAGCAAACTAAAACAGGAAGAGTACTCCTCTGATAAAAC
CGAATCTTTCAACGATGAAAGTGATGCAGAAAAAAACTGA
Protein sequenceShow/hide protein sequence
MEATRHTCLKLEVPTNVQPNERSSIFVKGTWNHHRFDLSITDGLNAWTCYGAISETTTQLTSLATEDEVRLRAAQWDQEPSEYVALAERYLGFQQPGSVYGFSDAGNGDK
RVCAYSVSYPSLLLFFSPLVDTDELSWTFDKEGMKLEWRWKCQPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVEFETAIYAKFL
NVLNAKKAKLREYRDQLTKQTTTGSKLKQEEYSSDKTESFNDESDAEKN