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ClCG09G016460 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G016460
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCysteine-rich and transmembrane domain-containing protein A-like
Genome locationCG_Chr09:32354273..32354939
RNA-Seq ExpressionClCG09G016460
SyntenyClCG09G016460
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031406.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]2.1e-0548.25Show/hide
Query:  MSDPKYAYPYPPPQG----GPLVMAPPQYAAPPPKKN------------QASWRD--------ALQLCVAAVLILMSVAVTALPLSVLL---------HL
        MSDPKYAYPYPPPQG    GP VMAPPQYAAPPPK+             +  W +        ALQL  AAV  LM+ AVT LPLS LL          +
Subjt:  MSDPKYAYPYPPPQG----GPLVMAPPQYAAPPPKKN------------QASWRD--------ALQLCVAAVLILMSVAVTALPLSVLL---------HL

Query:  TFACLCSSKLAFLL
           CL S   +FLL
Subjt:  TFACLCSSKLAFLL

KAG6571885.1 hypothetical protein SDJN03_28613, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0463.46Show/hide
Query:  MSDPKYAYPYPPPQG----GPLVMAPPQYAAPPPKKNQASWRDALQLCVAAV
        MSDPKYAYPYPPP G    GP VMAPPQYAAPPPK+        L+ C+AA+
Subjt:  MSDPKYAYPYPPPQG----GPLVMAPPQYAAPPPKKNQASWRDALQLCVAAV

KAG8497388.1 hypothetical protein CXB51_008632 [Gossypium anomalum]8.6e-0466.1Show/hide
Query:  MSDPKYAYPYPPPQG---GPLVMAPPQYAAPPPKKNQASWRDALQLCVAAVLILMSVAV
        MSDPKYAYPY P QG   GP VMAPPQYAAPPP++        LQL VA VL LM+VAV
Subjt:  MSDPKYAYPYPPPQG---GPLVMAPPQYAAPPPKKNQASWRDALQLCVAAVLILMSVAV

KGN43811.1 hypothetical protein Csa_017361 [Cucumis sativus]2.2e-0768.12Show/hide
Query:  MSDPKYAYPYPPPQG----GPLVMAPPQYAAPPPKKNQASWRDALQLCVAAVLILMSVAVTALPLSVLL
        MSDPKYAYPYPPPQG    GP VMAPPQYAAPPP++     + ALQL  AAV  LM+ AVT LPLS LL
Subjt:  MSDPKYAYPYPPPQG----GPLVMAPPQYAAPPPKKNQASWRDALQLCVAAVLILMSVAVTALPLSVLL

TrEMBL top hitse value%identityAlignment
A0A0A0K7L8 Uncharacterized protein1.1e-0768.12Show/hide
Query:  MSDPKYAYPYPPPQG----GPLVMAPPQYAAPPPKKNQASWRDALQLCVAAVLILMSVAVTALPLSVLL
        MSDPKYAYPYPPPQG    GP VMAPPQYAAPPP++     + ALQL  AAV  LM+ AVT LPLS LL
Subjt:  MSDPKYAYPYPPPQG----GPLVMAPPQYAAPPPKKNQASWRDALQLCVAAVLILMSVAVTALPLSVLL

A0A5A7SN04 Cysteine-rich and transmembrane domain-containing protein A-like9.9e-0648.25Show/hide
Query:  MSDPKYAYPYPPPQG----GPLVMAPPQYAAPPPKKN------------QASWRD--------ALQLCVAAVLILMSVAVTALPLSVLL---------HL
        MSDPKYAYPYPPPQG    GP VMAPPQYAAPPPK+             +  W +        ALQL  AAV  LM+ AVT LPLS LL          +
Subjt:  MSDPKYAYPYPPPQG----GPLVMAPPQYAAPPPKKN------------QASWRD--------ALQLCVAAVLILMSVAVTALPLSVLL---------HL

Query:  TFACLCSSKLAFLL
           CL S   +FLL
Subjt:  TFACLCSSKLAFLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGATCCCAAATATGCCTATCCCTATCCACCTCCTCAAGGAGGGCCCCTTGTGATGGCGCCACCGCAATACGCCGCCCCGCCGCCCAAAAAAAACCAGGCTTCTTG
GAGGGATGCCTTACAGCTCTGTGTTGCTGCTGTCTTGATCTTGATGAGTGTTGCTGTGACGGCCCTTCCATTATCTGTATTACTTCATCTAACCTTTGCTTGCCTTTGTA
GCTCTAAATTGGCTTTTTTACTTCATCATACAAAATTCAAGACTTGTTTTTCCTTCCTTGGGAGTGGTTTGATTTTGTGTGAGCTACAAGTCCATCCTAAGGTTTTATAC
TTTTCTTTAGACATCCAATTTGAAAGAAGAAGGTACAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGATCCCAAATATGCCTATCCCTATCCACCTCCTCAAGGAGGGCCCCTTGTGATGGCGCCACCGCAATACGCCGCCCCGCCGCCCAAAAAAAACCAGGCTTCTTG
GAGGGATGCCTTACAGCTCTGTGTTGCTGCTGTCTTGATCTTGATGAGTGTTGCTGTGACGGCCCTTCCATTATCTGTATTACTTCATCTAACCTTTGCTTGCCTTTGTA
GCTCTAAATTGGCTTTTTTACTTCATCATACAAAATTCAAGACTTGTTTTTCCTTCCTTGGGAGTGGTTTGATTTTGTGTGAGCTACAAGTCCATCCTAAGGTTTTATAC
TTTTCTTTAGACATCCAATTTGAAAGAAGAAGGTACAAGTGA
Protein sequenceShow/hide protein sequence
MSDPKYAYPYPPPQGGPLVMAPPQYAAPPPKKNQASWRDALQLCVAAVLILMSVAVTALPLSVLLHLTFACLCSSKLAFLLHHTKFKTCFSFLGSGLILCELQVHPKVLY
FSLDIQFERRRYK