| GenBank top hits | e value | %identity | Alignment |
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| XP_008459147.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II [Cucumis melo] | 6.8e-95 | 67.59 | Show/hide |
Query: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDPSCK---A
+PHTDSKGIMDLVKFLSPKHVILVHGEKPKMA LKERIHSELGIPCHDPANNETVSISSTLS+KAEASSMFIQSCSTPNFKFLKRNL DKIDP K
Subjt: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDPSCK---A
Query: GVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE-----------------------
TS++ IR+CS+ HFKHLNRNLDAKFDSSLSCGPELQVSDDRV EG+LVMENGKKTK +HQDELLL LGEQEHE
Subjt: GVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE-----------------------
Query: ---------LFSKLSSELSDRNVQNL----------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
L KLS+ELSDRNVQNL VFCCCSWLVADEILAWKIISILEKHDLGST
Subjt: ---------LFSKLSSELSDRNVQNL----------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
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| XP_038901162.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Benincasa hispida] | 9.5e-97 | 67.7 | Show/hide |
Query: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDP-----SC
+PHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLK+RIHSELGIPC+DPANNETVSISSTLSVKAEAS MFIQSCSTPNFKFLKRNLN+K+DP SC
Subjt: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDP-----SC
Query: KAGVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE---------------------
KA GGTS +FIRKCS+ HFK+LNRNLD KFDSS SCGPELQVSDDRV EG+LVME GKKTKV+HQDE+LL LGEQEHE
Subjt: KAGVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE---------------------
Query: -----------LFSKLSSELSDRNVQNL---------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
LFSKLSSELSD+NVQNL VFCCCSWL+ADEILAWKIISILEKH+LGST
Subjt: -----------LFSKLSSELSDRNVQNL---------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
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| XP_038901169.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X2 [Benincasa hispida] | 9.5e-97 | 67.7 | Show/hide |
Query: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDP-----SC
+PHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLK+RIHSELGIPC+DPANNETVSISSTLSVKAEAS MFIQSCSTPNFKFLKRNLN+K+DP SC
Subjt: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDP-----SC
Query: KAGVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE---------------------
KA GGTS +FIRKCS+ HFK+LNRNLD KFDSS SCGPELQVSDDRV EG+LVME GKKTKV+HQDE+LL LGEQEHE
Subjt: KAGVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE---------------------
Query: -----------LFSKLSSELSDRNVQNL---------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
LFSKLSSELSD+NVQNL VFCCCSWL+ADEILAWKIISILEKH+LGST
Subjt: -----------LFSKLSSELSDRNVQNL---------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
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| XP_038901170.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X3 [Benincasa hispida] | 9.8e-102 | 76.06 | Show/hide |
Query: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDP-----SC
+PHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLK+RIHSELGIPC+DPANNETVSISSTLSVKAEAS MFIQSCSTPNFKFLKRNLN+K+DP SC
Subjt: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDP-----SC
Query: KAGVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHELFSKLSSELSDRNVQNL----
KA GGTS +FIRKCS+ HFK+LNRNLD KFDSS SCGPELQVSDDRV EG+LVME GKKTKV+HQDE+LL LGEQEHELFSKLSSELSD+NVQNL
Subjt: KAGVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHELFSKLSSELSDRNVQNL----
Query: -----------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
VFCCCSWL+ADEILAWKIISILEKH+LGST
Subjt: -----------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
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| XP_038901174.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X6 [Benincasa hispida] | 9.5e-97 | 67.7 | Show/hide |
Query: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDP-----SC
+PHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLK+RIHSELGIPC+DPANNETVSISSTLSVKAEAS MFIQSCSTPNFKFLKRNLN+K+DP SC
Subjt: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDP-----SC
Query: KAGVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE---------------------
KA GGTS +FIRKCS+ HFK+LNRNLD KFDSS SCGPELQVSDDRV EG+LVME GKKTKV+HQDE+LL LGEQEHE
Subjt: KAGVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE---------------------
Query: -----------LFSKLSSELSDRNVQNL---------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
LFSKLSSELSD+NVQNL VFCCCSWL+ADEILAWKIISILEKH+LGST
Subjt: -----------LFSKLSSELSDRNVQNL---------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LQW3 Uncharacterized protein | 3.8e-91 | 65.85 | Show/hide |
Query: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDPSCKAGVG
+PHTDSKGIMDLVKFLSPKHVILVHGEKPKMA LKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNL D
Subjt: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDPSCKAGVG
Query: GTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE--------------------------
TS++ IR+CS+ HFKHL RNLDAKFDSSLSCGP LQVSDDRV EG+LVMENGKKTK +HQDELLL LG+QEHE
Subjt: GTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE--------------------------
Query: ------LFSKLSSELSDRNVQNL----------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
L KLS+ELSDRNVQNL VFCCCSWLVADEILAWKIISILEKHDLGST
Subjt: ------LFSKLSSELSDRNVQNL----------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
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| A0A1S3C9L2 cleavage and polyadenylation specificity factor subunit 3-II | 3.3e-95 | 67.59 | Show/hide |
Query: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDPSCK---A
+PHTDSKGIMDLVKFLSPKHVILVHGEKPKMA LKERIHSELGIPCHDPANNETVSISSTLS+KAEASSMFIQSCSTPNFKFLKRNL DKIDP K
Subjt: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDPSCK---A
Query: GVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE-----------------------
TS++ IR+CS+ HFKHLNRNLDAKFDSSLSCGPELQVSDDRV EG+LVMENGKKTK +HQDELLL LGEQEHE
Subjt: GVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE-----------------------
Query: ---------LFSKLSSELSDRNVQNL----------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
L KLS+ELSDRNVQNL VFCCCSWLVADEILAWKIISILEKHDLGST
Subjt: ---------LFSKLSSELSDRNVQNL----------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
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| A0A6J1FTR8 cleavage and polyadenylation specificity factor subunit 3-II isoform X2 | 2.6e-92 | 66.2 | Show/hide |
Query: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKID-PSCKAGV
+PHTDSKGIMDLVKFLSPKHVILVHGEKPKM TLKERIHSELGIPCHDPANNETVSISSTLS+KAE+SSMFIQSCSTPNFKFLKRNLNDKI+ +
Subjt: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKID-PSCKAGV
Query: GGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE-------------------------
GGTSS+F R+ S+ H KHLNRNLD KFDSSLSCGPEL+VSDDRV EG+LVMENGKKTKVVHQDELLL LGEQEHE
Subjt: GGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE-------------------------
Query: -------LFSKLSSELSDRNVQNL---------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
L SKLSSELSDRNVQN F CCSWLVADE+LAW+IISILEKHDL ST
Subjt: -------LFSKLSSELSDRNVQNL---------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
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| A0A6J1FYI7 cleavage and polyadenylation specificity factor subunit 3-II isoform X1 | 2.6e-92 | 66.2 | Show/hide |
Query: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKID-PSCKAGV
+PHTDSKGIMDLVKFLSPKHVILVHGEKPKM TLKERIHSELGIPCHDPANNETVSISSTLS+KAE+SSMFIQSCSTPNFKFLKRNLNDKI+ +
Subjt: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKID-PSCKAGV
Query: GGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE-------------------------
GGTSS+F R+ S+ H KHLNRNLD KFDSSLSCGPEL+VSDDRV EG+LVMENGKKTKVVHQDELLL LGEQEHE
Subjt: GGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE-------------------------
Query: -------LFSKLSSELSDRNVQNL---------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
L SKLSSELSDRNVQN F CCSWLVADE+LAW+IISILEKHDL ST
Subjt: -------LFSKLSSELSDRNVQNL---------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
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| Q6E435 ACT11D09.9 | 8.1e-94 | 67.24 | Show/hide |
Query: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDPSCK---A
+PHTDSKGIMDLVKFLSPKHVILVHGEKPKMA LKERIHSELGIPCHDPANNETVSISSTLS+KAEASSMFIQSCSTPNFKFLKRNL DKIDP K
Subjt: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDPSCK---A
Query: GVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE-----------------------
TS++ IR+CS+ HFKHLNRNLDAKFDSSLS GPELQVSDDRV EG+LVMENGKKTK +HQDELLL LGEQEHE
Subjt: GVGGTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHE-----------------------
Query: ---------LFSKLSSELSDRNVQNL----------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
L KLS+ELSDRNVQNL VFCCCSWLVADEILAWKIISILEKHDLGST
Subjt: ---------LFSKLSSELSDRNVQNL----------------------------------VFCCCSWLVADEILAWKIISILEKHDLGST
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q2YDM2 Integrator complex subunit 11 | 2.7e-09 | 28.77 | Show/hide |
Query: HTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDPSCKAG--VG
H D+KGIM LV P++V+LVHGE KM LK++I E + C+ PAN ETV++ ++ S+ S LKR + + P K +
Subjt: HTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDPSCKAG--VG
Query: GT----SSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHELFSKLSSELSDRNVQNLVFCCC
GT S F S+ K L A+ +C L D KE + M K V +D + L + + S L +
Subjt: GT----SSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEHELFSKLSSELSDRNVQNLVFCCC
Query: SWLVADEILAWKIISILEK
SW DE L + S+L+K
Subjt: SWLVADEILAWKIISILEK
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| Q503E1 Integrator complex subunit 11 | 2.0e-09 | 45.45 | Show/hide |
Query: HTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEAS
H D+KGIM L++ P++++LVHGE KM LK++I E I C PAN ET +I + SV + S
Subjt: HTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEAS
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| Q54YL3 Integrator complex subunit 11 homolog | 1.8e-10 | 37.5 | Show/hide |
Query: HTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEAS-SMFIQSCSTPNFKFLKRNLND
H D+KGI+ L+K +P++VILVHGEK KM L ++I E+G+ C+ PAN T+ I + S+ + S ++ + ++++ NLN+
Subjt: HTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEAS-SMFIQSCSTPNFKFLKRNLND
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| Q5ZIH0 Integrator complex subunit 11 | 3.5e-09 | 43.94 | Show/hide |
Query: HTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEAS
H D+KGIM L++ P++V+LVHGE KM LK++I E + C+ PAN ET +I + S+ + S
Subjt: HTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEAS
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| Q8GUU3 Cleavage and polyadenylation specificity factor subunit 3-II | 2.6e-33 | 34.94 | Show/hide |
Query: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDPSCKAGVG
+PHTD+KGIMDL KFLSPK+V+LVHGEKP M LKE+I SEL IPC PAN ETVS +ST +KA AS MF++SCS PNFKF
Subjt: NPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDPSCKAGVG
Query: GTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEH---------------------ELFSKL
S +L+V+D R +GVLV+E KK K+VHQDE+ L E+ H +L +L
Subjt: GTSSLFIRKCSDLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKTKVVHQDELLLFLGEQEH---------------------ELFSKL
Query: SSEL----------------------------------SDRNVQNLVFCCCSWLVADEILAWKIISILE
S+++ S + VF CC+W +AD L W+II+ ++
Subjt: SSEL----------------------------------SDRNVQNLVFCCCSWLVADEILAWKIISILE
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