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ClCG09G016875 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G016875
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionS-protein homolog
Genome locationCG_Chr09:33141543..33141989
RNA-Seq ExpressionClCG09G016875
SyntenyClCG09G016875
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646231.1 hypothetical protein Csa_023825, partial [Cucumis sativus]7.3e-5077.59Show/hide
Query:  LSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL
        L KW IHVVN LSNGQILL HCKSKDNDLGE +L  G+EFNW+F+VNFWNTTLFWCYLQKPNG  SSFE+FWIES SVWLY MC++ NCIW AKDDGIYL
Subjt:  LSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL

Query:  RDN-TNKKDVLIHKWE
        +DN    KD+LIHKWE
Subjt:  RDN-TNKKDVLIHKWE

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]4.3e-5063.09Show/hide
Query:  MMKQMEMRRMKKQSVVLLLLLCLAVLEETKA-AELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRS
        M + M +R  KK  +V LL+L L +LE  +A +EL KWQIHVVN LSNGQ L VHCKSKDNDLGEH L+ G+EFNW F+VN WNTTLFWCYL KP+G  +
Subjt:  MMKQMEMRRMKKQSVVLLLLLCLAVLEETKA-AELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRS

Query:  SFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE
        SF+ FW+E  S+WL+  CY SNCIW AKDDGIYLRDN  ++D+L+H+W+
Subjt:  SFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE

XP_031745090.1 S-protein homolog 1-like [Cucumis sativus]7.1e-6175.84Show/hide
Query:  MMKQMEMRRMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSS
        M KQ+E+  MKKQ VVLL +LCLA+LEETKA EL KW IHVVN LSNGQILL HCKSKDNDLGE +L  G+EFNW+F+VNFWNTTLFWCYLQKPNG  SS
Subjt:  MMKQMEMRRMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSS

Query:  FEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDN-TNKKDVLIHKWE
        FE+FWIES SVWLY MC++ NCIW AKDDGIYL+DN    KD+LIHKWE
Subjt:  FEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDN-TNKKDVLIHKWE

XP_038896421.1 S-protein homolog 1-like [Benincasa hispida]2.3e-5170.95Show/hide
Query:  MMKQMEMRRMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSS
        M KQMEM R KKQ VVLL  L L + EETKAAEL+KWQIHVVN LS+GQIL VHCKSKD+DLGEHKLSVG+EFNW F+              KPN   SS
Subjt:  MMKQMEMRRMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSS

Query:  FEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE
        FEAFWIES SVWLY+MCYDSNCIW AKDDGIYL+DNT ++D+LIHKWE
Subjt:  FEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE

XP_038896594.1 S-protein homolog 1-like [Benincasa hispida]5.1e-6783.33Show/hide
Query:  MEMRRMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAF
        MEMR M KQ VVL  +LCLA+L+E KAAEL+KWQIHVVN LSNGQIL VHCKSKDNDLGEHKLSVG+EFNW+F+VNFWNTTLFWCYLQKPN   SSF+AF
Subjt:  MEMRRMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAF

Query:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE
        WIESTSVWLY+MCYDSNCIWIAKDDG+YL+DNTN +DVLIHKWE
Subjt:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog5.3e-4660.84Show/hide
Query:  MRRMKKQSVV--LLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAF
        MR MK   +V   L +L LA+++ TKA  L +W IH+VN LSN Q L VHC+SKD+DLG+  LSVG+EFNW FK+NFW+TTLFWCYLQKPN    SFEAF
Subjt:  MRRMKKQSVV--LLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAF

Query:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKW
        W+E  S+WL+  C+ SNCIW AKDDGIYL+DN   +D L+H W
Subjt:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKW

A0A6J1CPR8 S-protein homolog5.7e-4862.59Show/hide
Query:  RMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIES
        R  K  +V L +  LA++E+ +A  LSKWQIHV N LSN Q+L VHCKSK++DLGEH LSVG+EFNW+F+VN W+TTL+WCYLQKPNG   SF+AFW+E 
Subjt:  RMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIES

Query:  TSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKW
         S+WLY  C +SNC W AKDDGIYLR+N + +DV +HKW
Subjt:  TSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKW

A0A6J1CQH6 S-protein homolog4.5e-4557.64Show/hide
Query:  MEMRRMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAF
        M  R +KK  +V+LL L LA++E   + EL +W IHVVN L NG++L VHCKS+D+DLGE  L  G+EF+W F+VN  +TTLFWC+L+KP+    SF+AF
Subjt:  MEMRRMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAF

Query:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE
        W+E TS+WL+  CYD+NCIW AKDDG+YLRDN  ++DVL+HKW+
Subjt:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE

A0A6J1CRU0 S-protein homolog2.1e-5063.09Show/hide
Query:  MMKQMEMRRMKKQSVVLLLLLCLAVLEETKA-AELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRS
        M + M +R  KK  +V LL+L L +LE  +A +EL KWQIHVVN LSNGQ L VHCKSKDNDLGEH L+ G+EFNW F+VN WNTTLFWCYL KP+G  +
Subjt:  MMKQMEMRRMKKQSVVLLLLLCLAVLEETKA-AELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRS

Query:  SFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE
        SF+ FW+E  S+WL+  CY SNCIW AKDDGIYLRDN  ++D+L+H+W+
Subjt:  SFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE

A0A6J1HAC3 S-protein homolog3.1e-3851.72Show/hide
Query:  QMEMRRMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEA
        +M    +K Q +V L+   LA+     +   SKW+IH+ N LSNGQ + VHCKSKDNDLGEH L+ G+EF W FKVNFW+TTLFWCYL+KPNG   +F+A
Subjt:  QMEMRRMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEA

Query:  FWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE
        FW+E  + WL   C  + C W A+D+GIYL+DN+   D  +H W+
Subjt:  FWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.7e-1233.08Show/hide
Query:  VVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLY
        V++ L+ C  +  + K   +      VV    N  +L VHCKS+D+D G H L  G  + W F VNF N+TL++C   +    +  F+ +        + 
Subjt:  VVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLY

Query:  DMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKW
        D     NC W AK+DGIY      KK+ L +KW
Subjt:  DMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKW

F4JLS0 S-protein homolog 18.5e-2544.83Show/hide
Query:  ELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        ++S+WQ+ VVN L+ G+ L +HCKSK++DLGE  L   + F+W F  N  ++T FWCY+ K NG   +   FW     V L+  C   NCIW AK DG+Y
Subjt:  ELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

Query:  LRDNTNKKDVLIHKWE
        L ++ + +DVL  KWE
Subjt:  LRDNTNKKDVLIHKWE

P0DN92 S-protein homolog 243.3e-1333.33Show/hide
Query:  SVVLLLLLCLAVLEETKAAELSKWQI-HVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVW
        S+V++ L+C   L+  +A E  +  +  V  +  N  +L +HCKS+D+DLG H L+ G  F WKF VNF  +TL++C   +    +  FE +        
Subjt:  SVVLLLLLCLAVLEETKAAELSKWQI-HVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVW

Query:  LYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKW
          D    +NC W A+ DGIY       K  L + W
Subjt:  LYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKW

Q2HQ46 S-protein homolog 742.1e-2342.24Show/hide
Query:  ELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        ++S+WQ+ V N L+ G+ L +HCKSK+NDLG+  L     F+W F  N  ++TLFWCY+ K +G   + + FW     V L+  C   NC+W AK+DG+Y
Subjt:  ELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

Query:  LRDNTNKKDVLIHKWE
        L ++   +DVL  KW+
Subjt:  LRDNTNKKDVLIHKWE

Q9LW22 S-protein homolog 216.3e-1238.46Show/hide
Query:  KWQIHVVNRLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL
        K  I V N L+  N  IL VHCKSK+ND+G   L +G   ++ FK NFW TT FWC L K    +        ++  ++  D    S+  W+A+DDGIY 
Subjt:  KWQIHVVNRLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL

Query:  RDNT
          ++
Subjt:  RDNT

Arabidopsis top hitse value%identityAlignment
AT2G06090.1 Plant self-incompatibility protein S1 family1.1e-1136.43Show/hide
Query:  VLLLLLCLAVLEETKAAELSKWQIHVVNRLS-NGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSS--FEAF-----WIE
        VLL+++ L+V     +    K Q+H  N  S N  +L VHCKSKD+DLG H ++   E+N+KF+ + +  T F+C L    G + S  F A+     ++ 
Subjt:  VLLLLLCLAVLEETKAAELSKWQIHVVNRLS-NGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSS--FEAF-----WIE

Query:  STSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKW
        ST V           IW A DDGIYL D  +   V I+ W
Subjt:  STSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKW

AT3G26880.1 Plant self-incompatibility protein S1 family4.5e-1338.46Show/hide
Query:  KWQIHVVNRLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL
        K  I V N L+  N  IL VHCKSK+ND+G   L +G   ++ FK NFW TT FWC L K    +        ++  ++  D    S+  W+A+DDGIY 
Subjt:  KWQIHVVNRLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL

Query:  RDNT
          ++
Subjt:  RDNT

AT4G16295.1 S-protein homologue 16.0e-2644.83Show/hide
Query:  ELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        ++S+WQ+ VVN L+ G+ L +HCKSK++DLGE  L   + F+W F  N  ++T FWCY+ K NG   +   FW     V L+  C   NCIW AK DG+Y
Subjt:  ELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

Query:  LRDNTNKKDVLIHKWE
        L ++ + +DVL  KWE
Subjt:  LRDNTNKKDVLIHKWE

AT4G29035.1 Plant self-incompatibility protein S1 family1.5e-2442.24Show/hide
Query:  ELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        ++S+WQ+ V N L+ G+ L +HCKSK+NDLG+  L     F+W F  N  ++TLFWCY+ K +G   + + FW     V L+  C   NC+W AK+DG+Y
Subjt:  ELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

Query:  LRDNTNKKDVLIHKWE
        L ++   +DVL  KW+
Subjt:  LRDNTNKKDVLIHKWE

AT5G04350.1 Plant self-incompatibility protein S1 family1.5e-1330.17Show/hide
Query:  LLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDM
        +++ LC+ V       E+ + ++ + N+L + ++L VHC+SKD+DLGEH L +G ++ + F  N W TT F C + +    +   +    E++    +  
Subjt:  LLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDM

Query:  CYDSNCIWIAKDDGIY
          +++C WI ++DGIY
Subjt:  CYDSNCIWIAKDDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGCAAATGGAAATGAGGCGTATGAAAAAGCAGTCTGTGGTGTTGTTGCTACTGTTGTGTTTGGCAGTGCTTGAAGAAACCAAGGCTGCGGAGCTTTCAAAATG
GCAGATCCATGTTGTGAACCGGCTAAGCAATGGCCAAATCCTGTTGGTGCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAACTTAGTGTTGGATCTGAATTCA
ATTGGAAATTTAAAGTAAACTTTTGGAATACCACATTGTTTTGGTGTTACCTACAGAAGCCGAATGGACTACGTTCGTCATTCGAAGCCTTTTGGATTGAGAGCACATCG
GTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATTGCTAAAGATGACGGAATTTATTTGAGGGACAACACTAATAAAAAAGATGTTTTGATTCATAAGTG
GGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGCAAATGGAAATGAGGCGTATGAAAAAGCAGTCTGTGGTGTTGTTGCTACTGTTGTGTTTGGCAGTGCTTGAAGAAACCAAGGCTGCGGAGCTTTCAAAATG
GCAGATCCATGTTGTGAACCGGCTAAGCAATGGCCAAATCCTGTTGGTGCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAACTTAGTGTTGGATCTGAATTCA
ATTGGAAATTTAAAGTAAACTTTTGGAATACCACATTGTTTTGGTGTTACCTACAGAAGCCGAATGGACTACGTTCGTCATTCGAAGCCTTTTGGATTGAGAGCACATCG
GTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATTGCTAAAGATGACGGAATTTATTTGAGGGACAACACTAATAAAAAAGATGTTTTGATTCATAAGTG
GGAATAA
Protein sequenceShow/hide protein sequence
MMKQMEMRRMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTS
VWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE