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ClCG09G016878 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G016878
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionS-protein homolog
Genome locationCG_Chr09:33171101..33171547
RNA-Seq ExpressionClCG09G016878
SyntenyClCG09G016878
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646231.1 hypothetical protein Csa_023825, partial [Cucumis sativus]5.1e-5178.45Show/hide
Query:  LAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYL
        L KW IHVVN LSNGQILL HCKSKDNDLGE +L  G+EFNWRF+VNFWNTTLFWCYLQKPNG HSSFE+FWIES S+WLY MC++ NCIW AKDDGIYL
Subjt:  LAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYL

Query:  RDN-TNQKDVLIHKWE
        +DN    KD+LIHKWE
Subjt:  RDN-TNQKDVLIHKWE

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]3.3e-5063.76Show/hide
Query:  MMKQMEMRRMKKQCVVLLVLLCLAVLEETKA-AELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHS
        M + M +R  KK  +V L++L L +LE  +A +EL KWQIHVVN LSNGQ L VHCKSKDNDLGEH L+ G+EFNW F+VN WNTTLFWCYL KP+G  +
Subjt:  MMKQMEMRRMKKQCVVLLVLLCLAVLEETKA-AELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHS

Query:  SFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE
        SF+ FW+E  SIWL+  CY SNCIW AKDDGIYLRDN  Q+D+L+H+W+
Subjt:  SFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

XP_031745090.1 S-protein homolog 1-like [Cucumis sativus]4.4e-6377.18Show/hide
Query:  MMKQMEMRRMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS
        M KQ+E+  MKKQCVVLL +LCLA+LEETKA EL KW IHVVN LSNGQILL HCKSKDNDLGE +L  G+EFNWRF+VNFWNTTLFWCYLQKPNG HSS
Subjt:  MMKQMEMRRMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS

Query:  FEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYLRDN-TNQKDVLIHKWE
        FE+FWIES S+WLY MC++ NCIW AKDDGIYL+DN    KD+LIHKWE
Subjt:  FEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYLRDN-TNQKDVLIHKWE

XP_038896421.1 S-protein homolog 1-like [Benincasa hispida]6.4e-5472.97Show/hide
Query:  MMKQMEMRRMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS
        M KQMEM R KKQCVVLL  L L + EETKAAELAKWQIHVVN LS+GQIL VHCKSKD+DLGEHKLSVG+EFNW F+              KPN  HSS
Subjt:  MMKQMEMRRMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS

Query:  FEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE
        FEAFWIES S+WLY+MCYDSNCIW AKDDGIYL+DNT Q+D+LIHKWE
Subjt:  FEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

XP_038896594.1 S-protein homolog 1-like [Benincasa hispida]1.1e-6985.42Show/hide
Query:  MEMRRMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAF
        MEMR M KQCVVL  +LCLA+L+E KAAELAKWQIHVVN LSNGQIL VHCKSKDNDLGEHKLSVG+EFNWRF+VNFWNTTLFWCYLQKPN  HSSF+AF
Subjt:  MEMRRMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAF

Query:  WIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE
        WIESTS+WLY+MCYDSNCIWIAKDDG+YL+DNTN +DVLIHKWE
Subjt:  WIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog9.1e-4661.54Show/hide
Query:  MRRMKKQCVV--LLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAF
        MR MK   +V   L +L LA+++ TKA  L +W IH+VN LSN Q L VHC+SKD+DLG+  LSVG+EFNW FK+NFW+TTLFWCYLQKPN    SFEAF
Subjt:  MRRMKKQCVV--LLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAF

Query:  WIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        W+E  SIWL+  C+ SNCIW AKDDGIYL+DN   +D L+H W
Subjt:  WIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

A0A6J1CPR8 S-protein homolog5.7e-4863.31Show/hide
Query:  RMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIES
        R  K  +V L +  LA++E+ +A  L+KWQIHV N LSN Q+L VHCKSK++DLGEH LSVG+EFNWRF+VN W+TTL+WCYLQKPNG   SF+AFW+E 
Subjt:  RMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIES

Query:  TSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
         SIWLY  C +SNC W AKDDGIYLR+N + +DV +HKW
Subjt:  TSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

A0A6J1CQH6 S-protein homolog3.4e-4558.33Show/hide
Query:  MEMRRMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAF
        M  R +KK  +V+L+ L LA++E   + EL +W IHVVN L NG++L VHCKS+D+DLGE  L  G+EF+W F+VN  +TTLFWC+L+KP+    SF+AF
Subjt:  MEMRRMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAF

Query:  WIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE
        W+E TSIWL+  CYD+NCIW AKDDG+YLRDN  Q+DVL+HKW+
Subjt:  WIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

A0A6J1CRU0 S-protein homolog1.6e-5063.76Show/hide
Query:  MMKQMEMRRMKKQCVVLLVLLCLAVLEETKA-AELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHS
        M + M +R  KK  +V L++L L +LE  +A +EL KWQIHVVN LSNGQ L VHCKSKDNDLGEH L+ G+EFNW F+VN WNTTLFWCYL KP+G  +
Subjt:  MMKQMEMRRMKKQCVVLLVLLCLAVLEETKA-AELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHS

Query:  SFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE
        SF+ FW+E  SIWL+  CY SNCIW AKDDGIYLRDN  Q+D+L+H+W+
Subjt:  SFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

A0A6J1HAC3 S-protein homolog5.3e-3851.72Show/hide
Query:  QMEMRRMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEA
        +M    +K Q +V LV   LA+     +   +KW+IH+ N LSNGQ + VHCKSKDNDLGEH L+ G+EF W FKVNFW+TTLFWCYL+KPNG   +F+A
Subjt:  QMEMRRMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEA

Query:  FWIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE
        FW+E  + WL   C  + C W A+D+GIYL+DN+   D  +H W+
Subjt:  FWIESTSIWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 62.4e-1132.84Show/hide
Query:  VVLLVLL-CLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWL
        +VL+ L+ C  +  + K   +      VV    N  +L VHCKS+D+D G H L  G  + W F VNF N+TL++C   +       F+ +        +
Subjt:  VVLLVLL-CLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWL

Query:  YDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
         D     NC W AK+DGIY      +K+ L +KW
Subjt:  YDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

F4JLS0 S-protein homolog 13.8e-2543.97Show/hide
Query:  ELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIY
        ++++WQ+ VVN L+ G+ L +HCKSK++DLGE  L   + F+W F  N  ++T FWCY+ K NG H +   FW     + L+  C   NCIW AK DG+Y
Subjt:  ELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIY

Query:  LRDNTNQKDVLIHKWE
        L ++ + +DVL  KWE
Subjt:  LRDNTNQKDVLIHKWE

P0DN92 S-protein homolog 243.7e-1232.09Show/hide
Query:  VVLLVLLCLAVLEETKAAELAKWQI-HVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWL
        +V++ L+C   L+  +A E  +  +  V  +  N  +L +HCKS+D+DLG H L+ G  F W+F VNF  +TL++C   +       FE +         
Subjt:  VVLLVLLCLAVLEETKAAELAKWQI-HVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWL

Query:  YDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
         D    +NC W A+ DGIY       K  L + W
Subjt:  YDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

Q2HQ46 S-protein homolog 749.4e-2441.38Show/hide
Query:  ELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIY
        ++++WQ+ V N L+ G+ L +HCKSK+NDLG+  L     F+W F  N  ++TLFWCY+ K +G H + + FW     + L+  C   NC+W AK+DG+Y
Subjt:  ELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIY

Query:  LRDNTNQKDVLIHKWE
        L ++   +DVL  KW+
Subjt:  LRDNTNQKDVLIHKWE

Q9LW22 S-protein homolog 211.4e-1138.46Show/hide
Query:  KWQIHVVNRLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYL
        K  I V N L+  N  IL VHCKSK+ND+G   L +G   ++ FK NFW TT FWC L K             ++  ++  D    S+  W+A+DDGIY 
Subjt:  KWQIHVVNRLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYL

Query:  RDNT
          ++
Subjt:  RDNT

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family1.0e-1238.46Show/hide
Query:  KWQIHVVNRLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYL
        K  I V N L+  N  IL VHCKSK+ND+G   L +G   ++ FK NFW TT FWC L K             ++  ++  D    S+  W+A+DDGIY 
Subjt:  KWQIHVVNRLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIYL

Query:  RDNT
          ++
Subjt:  RDNT

AT4G16295.1 S-protein homologue 12.7e-2643.97Show/hide
Query:  ELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIY
        ++++WQ+ VVN L+ G+ L +HCKSK++DLGE  L   + F+W F  N  ++T FWCY+ K NG H +   FW     + L+  C   NCIW AK DG+Y
Subjt:  ELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIY

Query:  LRDNTNQKDVLIHKWE
        L ++ + +DVL  KWE
Subjt:  LRDNTNQKDVLIHKWE

AT4G29035.1 Plant self-incompatibility protein S1 family6.7e-2541.38Show/hide
Query:  ELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIY
        ++++WQ+ V N L+ G+ L +HCKSK+NDLG+  L     F+W F  N  ++TLFWCY+ K +G H + + FW     + L+  C   NC+W AK+DG+Y
Subjt:  ELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIY

Query:  LRDNTNQKDVLIHKWE
        L ++   +DVL  KW+
Subjt:  LRDNTNQKDVLIHKWE

AT5G04347.1 Plant self-incompatibility protein S1 family1.4e-1143.62Show/hide
Query:  VVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQK-PN-GLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIY
        V N L+N ++L V C+SKD++LG+H L VG      F  N W  TLFWC L K P+  LH +F+A+     S W  D+      +WIA++DGIY
Subjt:  VVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQK-PN-GLHSSFEAFWIESTSIWLYDMCYDSNCIWIAKDDGIY

AT5G04350.1 Plant self-incompatibility protein S1 family4.1e-1433.06Show/hide
Query:  LLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYL-QKPNGLHS----SFEAFWIESTSI
        +++ LC+ V       E+ + ++ + N+L + ++L VHC+SKD+DLGEH L +G ++ + F  N W TT F C + Q PN  H     ++E  W ++   
Subjt:  LLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYL-QKPNGLHS----SFEAFWIESTSI

Query:  WLYDMCYDSNCIWIAKDDGIY
               +++C WI ++DGIY
Subjt:  WLYDMCYDSNCIWIAKDDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGCAAATGGAAATGAGGCGTATGAAAAAGCAGTGTGTGGTGTTGTTGGTATTGTTGTGTTTGGCAGTGCTCGAAGAAACCAAGGCTGCGGAGCTTGCAAAATG
GCAGATCCATGTTGTGAACCGGCTAAGCAATGGCCAAATCCTGTTGGTGCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAGCTTAGTGTTGGATCTGAATTCA
ATTGGAGATTTAAAGTAAACTTTTGGAATACCACATTGTTTTGGTGTTACCTGCAGAAGCCGAATGGACTACATTCGTCATTCGAAGCCTTTTGGATTGAGAGCACATCG
ATTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATCGCTAAAGATGACGGAATTTATTTGAGGGACAACACTAATCAAAAAGATGTTTTGATTCATAAGTG
GGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGCAAATGGAAATGAGGCGTATGAAAAAGCAGTGTGTGGTGTTGTTGGTATTGTTGTGTTTGGCAGTGCTCGAAGAAACCAAGGCTGCGGAGCTTGCAAAATG
GCAGATCCATGTTGTGAACCGGCTAAGCAATGGCCAAATCCTGTTGGTGCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAGCTTAGTGTTGGATCTGAATTCA
ATTGGAGATTTAAAGTAAACTTTTGGAATACCACATTGTTTTGGTGTTACCTGCAGAAGCCGAATGGACTACATTCGTCATTCGAAGCCTTTTGGATTGAGAGCACATCG
ATTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATCGCTAAAGATGACGGAATTTATTTGAGGGACAACACTAATCAAAAAGATGTTTTGATTCATAAGTG
GGAATAA
Protein sequenceShow/hide protein sequence
MMKQMEMRRMKKQCVVLLVLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTS
IWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE