; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG09G016890 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G016890
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionbinding partner of ACD11 1-like
Genome locationCG_Chr09:33314146..33318892
RNA-Seq ExpressionClCG09G016890
SyntenyClCG09G016890
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034360 - Vip1-like, RNA recognition motif, plant
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042981.1 binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa]6.2e-11192.03Show/hide
Query:  STRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPEN
        +TRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMR DNERSQ+AFVTFKDPKGAETSILLSGATIVDQPVSI+SAPDYNLPAV ASAPVAVPVSTPA +N
Subjt:  STRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPEN

Query:  --PSPATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGS
           +  TAGSA+QK EDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGS
Subjt:  --PSPATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGS

Query:  AIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHAGNSS
        A+M NRYVLTGASWV+QTFQRVAKAAVDVSQKTKEKVLA EDQGKH GNSS
Subjt:  AIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHAGNSS

XP_004148092.1 binding partner of ACD11 1 [Cucumis sativus]9.6e-11292.86Show/hide
Query:  STRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPEN
        +TRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMR DNERSQ+AFVTFKD KGAETSILLSGATIVDQPVSI+SAPDYNLPAV ASAPVAVPVSTPA +N
Subjt:  STRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPEN

Query:  PSP---ATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
         +    +TAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
Subjt:  PSP---ATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG

Query:  SAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHAGNSS
        SAIMTNRYVLTGASWV+QTFQRVAKAAVDVSQKTKEKVLA EDQGKH GNSS
Subjt:  SAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHAGNSS

XP_023533747.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo]1.5e-10487.76Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS
        RTVRVTNVSLSA+EKDLRDFFSFSGEIEFVEMRKDNERSQ+AFVTFKDPKGAETSILLSGATIVDQPVSIASAPDY+LPAV ASAP  +PVS+P+ EN  
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS

Query:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMT
          TAGSAMQKAEDVVSSMLAKGFTLGKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKAAV+NAG+A+M 
Subjt:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMT

Query:  NRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHAGNS
        NRYV TGASWVTQTFQRVAKAAV+VS KTKEKVLAEDQ K  G S
Subjt:  NRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHAGNS

XP_038900617.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]1.1e-11293.55Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS
        RTVRVTNVSLS TEKDLRDFFSFSGEIEFVEMRKD ERSQ+AFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAV ASAPVA+PVSTPA +N +
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS

Query:  --PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI
           +TAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI
Subjt:  --PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI

Query:  MTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHAGNSS
        MTNRYVLTGASWV+QTFQRVAKAAVDVSQKTKEKVL EDQGKH GNSS
Subjt:  MTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHAGNSS

XP_038900618.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]1.1e-11293.55Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS
        RTVRVTNVSLS TEKDLRDFFSFSGEIEFVEMRKD ERSQ+AFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAV ASAPVA+PVSTPA +N +
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS

Query:  --PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI
           +TAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI
Subjt:  --PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAI

Query:  MTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHAGNSS
        MTNRYVLTGASWV+QTFQRVAKAAVDVSQKTKEKVL EDQGKH GNSS
Subjt:  MTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHAGNSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein4.6e-11292.86Show/hide
Query:  STRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPEN
        +TRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMR DNERSQ+AFVTFKD KGAETSILLSGATIVDQPVSI+SAPDYNLPAV ASAPVAVPVSTPA +N
Subjt:  STRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPEN

Query:  PSP---ATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
         +    +TAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG
Subjt:  PSP---ATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAG

Query:  SAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHAGNSS
        SAIMTNRYVLTGASWV+QTFQRVAKAAVDVSQKTKEKVLA EDQGKH GNSS
Subjt:  SAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHAGNSS

A0A5A7TN24 Binding partner of ACD11 1-like isoform X13.0e-11192.03Show/hide
Query:  STRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPEN
        +TRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMR DNERSQ+AFVTFKDPKGAETSILLSGATIVDQPVSI+SAPDYNLPAV ASAPVAVPVSTPA +N
Subjt:  STRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPEN

Query:  --PSPATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGS
           +  TAGSA+QK EDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGS
Subjt:  --PSPATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGS

Query:  AIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHAGNSS
        A+M NRYVLTGASWV+QTFQRVAKAAVDVSQKTKEKVLA EDQGKH GNSS
Subjt:  AIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHAGNSS

A0A6J1D4Q0 binding partner of ACD11 1-like isoform X11.4e-10086.59Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS
        RTVRV NVSLSATEKDLRDFFSFSGEIEFVEMRKD+ERSQVAFVTFKD KGAETSILLSGATIVDQPVSI S PDYNLPA  A +P    VSTP  EN  
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS

Query:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMT
         AT GSAM+KAEDVVSSMLAKGF+LGKDALNKAKSFDERHQLTSTAS KVASLDQKIGLSEKISVGTTVVNE+VR+MDEKFQVSEKTKAAVS AGSAIMT
Subjt:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMT

Query:  NRYVLTGASWVTQTFQRVAKAAVDVSQKTKEK-VLAEDQGKHAGNS
        NRYV TGASWVT+ FQRVAK AV+VSQKTKEK VLAEDQGK+ GNS
Subjt:  NRYVLTGASWVTQTFQRVAKAAVDVSQKTKEK-VLAEDQGKHAGNS

A0A6J1G681 binding partner of ACD11 1-like1.4e-10386.94Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS
        RTVRVTNVSLSA+EKDLRDFFSFSGEIE VEMRKDNERSQ+AFVTFKDPKGAETSILLSGATIVDQPVSIASAPDY+LPAV ASAP  +PVS+P+ EN  
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS

Query:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMT
          TAGSAM KAEDVVSSMLAKGFTLGKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKAAV+NAG+A+M 
Subjt:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMT

Query:  NRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHAGNS
        NRYV TGASWVTQTFQRVAKAAV+VS KTKEKVLAEDQ K  G S
Subjt:  NRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHAGNS

A0A6J1L7W4 binding partner of ACD11 1-like1.0e-10386.94Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS
        RTVRVTNVSLSA+EKDLRDFFSFSGEIEFVEMRKDNERSQ+AFVTFKD KGAETSILLSGATIVDQPVSIA+APDYNLPAV ASAP  +PVS+P+ EN  
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS

Query:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMT
          TAGSAMQKAEDVVSSMLAKGFTLGKD LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKAAV+NAG+A+M 
Subjt:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMT

Query:  NRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHAGNS
        NRYV TGASWVTQTFQRVAKAAV+VS KTKEKVLAEDQ K  G S
Subjt:  NRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHAGNS

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.3e-0525.88Show/hide
Query:  VRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPSPA
        V VTN+S   TEK + DFFSF G++  +   K  E +Q A + F+ P   +T++LL  A +    + I S                      A       
Subjt:  VRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPSPA

Query:  TAGSAMQKAED-----VVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVREMDEKFQVSEKTKAAVSNAGS
          G    + ED     ++S +L++G+ L    L K+   D+ + ++S     + S      LS   SV     V EK  E+D KF +S+K    ++   S
Subjt:  TAGSAMQKAED-----VVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVREMDEKFQVSEKTKAAVSNAGS

Query:  AIMTNRYVLTGASWVTQTFQRVAKAAVD
         + T  +     +  T   Q+V  A  D
Subjt:  AIMTNRYVLTGASWVTQTFQRVAKAAVD

Q9LFD5 Binding partner of ACD11 13.4e-5955.42Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS
        R+V+V N+S  ATE D+++FFSFSGE+E +++ + NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y+ PA             P  E  S
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS

Query:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AVSN
         + A S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        VS+
Subjt:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AVSN

Query:  AGSAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHA
        AGSA+M NRYVLTG SW    F RVA+AA +V QKTKEKV AE   + A
Subjt:  AGSAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHA

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.0e-7161.13Show/hide
Query:  TVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPSP
        TV+V+NVSL AT++DL++FFSFSG+I ++E + + ER+++A+VTFKD +GAET++LLSGATIVD  V ++ APDY L      +P A+    P   N SP
Subjt:  TVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPSP

Query:  ATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA-------VSNA
            S ++KAEDVVSSMLAKGF LGKDA+ KAKS DE+HQLTSTAS+KVAS D+KIG ++KI+ GT VV EKVRE+D+K+QVSEKTK+A       VSNA
Subjt:  ATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA-------VSNA

Query:  GSAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKV-LAEDQGK
        GSAIM NRYVLTGA+WVT  F +VAKAA +V QK KEKV +AE++ K
Subjt:  GSAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKV-LAEDQGK

AT5G16840.1 binding partner of acd11 12.4e-6055.42Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS
        R+V+V N+S  ATE D+++FFSFSGE+E +++ + NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y+ PA             P  E  S
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS

Query:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AVSN
         + A S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        VS+
Subjt:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AVSN

Query:  AGSAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHA
        AGSA+M NRYVLTG SW    F RVA+AA +V QKTKEKV AE   + A
Subjt:  AGSAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHA

AT5G16840.2 binding partner of acd11 19.7e-6255.42Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS
        R+V+V N+S  ATE D+++FFSFSGE+E ++++  NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y+ PA             P  E  S
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPS

Query:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AVSN
         + A S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        VS+
Subjt:  PATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AVSN

Query:  AGSAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHA
        AGSA+M NRYVLTG SW    F RVA+AA +V QKTKEKV AE   + A
Subjt:  AGSAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHA

AT5G16840.3 binding partner of acd11 11.8e-6054.98Show/hide
Query:  STRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPEN
        + R+V+V N+S  ATE D+++FFSFSGE+E +++ + NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y+ PA             P  E 
Subjt:  STRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPEN

Query:  PSPATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV
         S + A S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        V
Subjt:  PSPATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------AV

Query:  SNAGSAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHA
        S+AGSA+M NRYVLTG SW    F RVA+AA +V QKTKEKV AE   + A
Subjt:  SNAGSAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKVLAEDQGKHA

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.9e-6757.83Show/hide
Query:  TVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLP----AVVASAPVAVPVSTPAPE
        TV+V+NVSL ATE+DL++FFSFSG+I ++E + +N+ S++A+VTFKD +GAET++LL+G+TIVD  V++  +PDY LP    A + S   +   S+P  E
Subjt:  TVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLP----AVVASAPVAVPVSTPAPE

Query:  NPSPATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA-------
        +       S  +KAEDVVS M++KGF LGKDA+ KAKS DE+HQLTSTAS++V S D++IG +EKI+ GTTVV+EKV+E+D+KFQV+EKTK+A       
Subjt:  NPSPATAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA-------

Query:  VSNAGSAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKV-LAEDQ
        VSNAGSAIM NRYVLTGA+WVT  F RV+KAA +V QK KEKV LAE++
Subjt:  VSNAGSAIMTNRYVLTGASWVTQTFQRVAKAAVDVSQKTKEKV-LAEDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTAGAAGCAGACAGTGAACGAGAGGCAGAATGGAAGAGGGAGAAGAGAAAGAAAACTGATAAACAGAGAGTGAGAGAGAGAAAGAGACCTTCGAACGGTCGGAA
AAAGAAGGATTGTAGCCTCTGCAGAAGATTCCGGGGGCCGTGGCCGTCAGAGGAGGCGGCAGATAGCCTCTACGAGAACCTAAACAACCGCCAAGCCACAACACAACTCT
CAAGGCCATTCTTCCTTCTTCCTCTCTCCTCTCTCTCTAAGAGCTTGGATTGGGAAATCCCTCAGGTGGGTCAGACAGAAGCATCATGGCGTTACTTAGGATTCAAGAAG
CAATCAACGAGAACGGTGAGAGTTACTAATGTCTCCTTAAGCGCGACAGAGAAAGATTTGAGAGACTTTTTTTCTTTCTCCGGTGAAATTGAATTTGTCGAAATGCGAAA
GGACAATGAACGATCTCAAGTTGCATTTGTTACCTTTAAGGATCCGAAAGGGGCAGAGACATCGATTCTTCTCTCGGGAGCTACAATTGTTGATCAGCCTGTAAGCATCG
CTTCTGCTCCAGATTACAACCTTCCTGCTGTTGTTGCCAGTGCCCCTGTAGCTGTACCAGTGTCTACTCCAGCTCCAGAAAACCCAAGCCCTGCTACTGCTGGATCTGCA
ATGCAAAAGGCAGAGGATGTTGTTAGTAGCATGTTGGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCAAAGTCTTTTGATGAAAGGCACCAGTTGACTTC
AACGGCCTCATCCAAAGTCGCTTCTCTCGACCAAAAGATCGGCCTTAGCGAGAAAATTAGTGTTGGCACAACAGTGGTGAATGAGAAAGTGAGGGAAATGGATGAGAAGT
TTCAAGTGTCTGAGAAGACCAAGGCAGCTGTGAGCAATGCAGGATCAGCCATAATGACTAACCGCTACGTCTTAACCGGGGCTTCCTGGGTTACGCAGACATTTCAAAGA
GTCGCGAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGATCAAGGTAAACATGCGGGGAATTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTAGAAGCAGACAGTGAACGAGAGGCAGAATGGAAGAGGGAGAAGAGAAAGAAAACTGATAAACAGAGAGTGAGAGAGAGAAAGAGACCTTCGAACGGTCGGAA
AAAGAAGGATTGTAGCCTCTGCAGAAGATTCCGGGGGCCGTGGCCGTCAGAGGAGGCGGCAGATAGCCTCTACGAGAACCTAAACAACCGCCAAGCCACAACACAACTCT
CAAGGCCATTCTTCCTTCTTCCTCTCTCCTCTCTCTCTAAGAGCTTGGATTGGGAAATCCCTCAGGTGGGTCAGACAGAAGCATCATGGCGTTACTTAGGATTCAAGAAG
CAATCAACGAGAACGGTGAGAGTTACTAATGTCTCCTTAAGCGCGACAGAGAAAGATTTGAGAGACTTTTTTTCTTTCTCCGGTGAAATTGAATTTGTCGAAATGCGAAA
GGACAATGAACGATCTCAAGTTGCATTTGTTACCTTTAAGGATCCGAAAGGGGCAGAGACATCGATTCTTCTCTCGGGAGCTACAATTGTTGATCAGCCTGTAAGCATCG
CTTCTGCTCCAGATTACAACCTTCCTGCTGTTGTTGCCAGTGCCCCTGTAGCTGTACCAGTGTCTACTCCAGCTCCAGAAAACCCAAGCCCTGCTACTGCTGGATCTGCA
ATGCAAAAGGCAGAGGATGTTGTTAGTAGCATGTTGGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCAAAGTCTTTTGATGAAAGGCACCAGTTGACTTC
AACGGCCTCATCCAAAGTCGCTTCTCTCGACCAAAAGATCGGCCTTAGCGAGAAAATTAGTGTTGGCACAACAGTGGTGAATGAGAAAGTGAGGGAAATGGATGAGAAGT
TTCAAGTGTCTGAGAAGACCAAGGCAGCTGTGAGCAATGCAGGATCAGCCATAATGACTAACCGCTACGTCTTAACCGGGGCTTCCTGGGTTACGCAGACATTTCAAAGA
GTCGCGAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGATCAAGGTAAACATGCGGGGAATTCTTCTTAACTCATCTAAGAATTGCTGCG
CTCAAAATGTGTAGCCCTGAGCATCTCAATATATAAATCATATATATTTGGCCAAAACAATGTGAGGACCAATTCTTAGCTTGCTTTTTCTCATCTCAGTTTGATATATT
TTTAATGCTTTATTTTAGTTTTAGTATTAGGGAGCACACATATAAGCTACATTACATGCTTATGTTGTAATTCAATTGTACGAAAAGCATATATGCTATGTGATAAAAGT
ATTCCAG
Protein sequenceShow/hide protein sequence
MALEADSEREAEWKREKRKKTDKQRVRERKRPSNGRKKKDCSLCRRFRGPWPSEEAADSLYENLNNRQATTQLSRPFFLLPLSSLSKSLDWEIPQVGQTEASWRYLGFKK
QSTRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYNLPAVVASAPVAVPVSTPAPENPSPATAGSA
MQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVTQTFQR
VAKAAVDVSQKTKEKVLAEDQGKHAGNSS