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ClCG09G017630 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG09G017630
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr09:34562124..34563005
RNA-Seq ExpressionClCG09G017630
SyntenyClCG09G017630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_041065244.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 [Carcharodon carcharias]3.4e-0634.08Show/hide
Query:  SSPSPEALTSCIVSRLPPVPKGSSTAAATGSWSHLSAAPLQIYPPPPRSR--SFCHRVVQTRPPPHCVDLSPAPRCADPSRS-RIVQIHHRRRVEQIHES
        SSP+P A  S       P P+ + +A A  +             P PR+   S   R  +  P P   + SP PR A+PS + R  +     R  +   +
Subjt:  SSPSPEALTSCIVSRLPPVPKGSSTAAATGSWSHLSAAPLQIYPPPPRSR--SFCHRVVQTRPPPHCVDLSPAPRCADPSRS-RIVQIHHRRRVEQIHES

Query:  PHRADPSSTLRRADPRP-PHHVDQSPPPRRADPR-TPHRADPSLASRRADPR-TPHCADPSLAPRRADPRIASRRSVPA
        P  A+PS T R A+P P P   + SP PR A+P  TP  A+PS   R A+P  TP  A+PS  PR A+P    R + P+
Subjt:  PHRADPSSTLRRADPRP-PHHVDQSPPPRRADPR-TPHRADPSLASRRADPR-TPHCADPSLAPRRADPRIASRRSVPA
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTATCAAGAAAACGTTTCTTACTAAAACCCTATTTACATTAGGGTTTGGAAACTCACATCTTCATAAGAATCGCCGCCGCCTCTTCATATCCATTCCTTTGAGTTC
GCCGTCGCCGGAAGCATTAACCAGTTGTATCGTTAGCCGTTTGCCGCCGGTTCCTAAAGGATCATCAACCGCCGCCGCCACCGGTTCGTGGTCTCATCTATCCGCCGCGC
CTCTGCAGATCTATCCGCCGCCTCCTCGATCTCGATCATTTTGCCACCGCGTCGTGCAGACCCGTCCGCCGCCGCATTGCGTAGATCTGTCCCCGGCGCCACGTTGTGCA
GATCCGTCCCGCAGCCGCATCGTGCAGATCCATCATCGCCGCCGCGTCGAGCAGATCCACGAATCACCGCATCGCGCAGATCCGTCCTCGACGCTGCGTCGTGCAGATCC
ACGACCACCGCATCATGTAGACCAGTCCCCACCACCGCGTCGAGCAGATCCACGAACACCGCATCGTGCAGATCCGTCCCTGGCATCGCGTCGAGCAGATCCACGAACAC
CGCATTGCGCAGATCCGTCCCTGGCGCCGCGTAGAGCAGATCCACGAATCGCATCGCGTAGATCCGTCCCCGCCGCCTCGTCGAGCAGATCCACAAACCGTCGTCGCATC
GTGCAAGAACTTCGTCCGCCGCATCGTGCAGGTCTGTTTCCCGCCGCATCATGCAAGTCAGTTCGCTGCCACCTTGTGCATATCCTTCCGCCGCCGCCTCTGCATATCCT
TTCTCGTCGCCGCCGGTTCGTGGTAGTTTTTGGGTTGACCGGTTCGTGGTTCATTGTAGCAACTTTGCACCGCCGGTTCGTGGTAGTTTTTAGGTTCGCTAGTTCTTGGT
AG
mRNA sequenceShow/hide mRNA sequence
ATGCCTATCAAGAAAACGTTTCTTACTAAAACCCTATTTACATTAGGGTTTGGAAACTCACATCTTCATAAGAATCGCCGCCGCCTCTTCATATCCATTCCTTTGAGTTC
GCCGTCGCCGGAAGCATTAACCAGTTGTATCGTTAGCCGTTTGCCGCCGGTTCCTAAAGGATCATCAACCGCCGCCGCCACCGGTTCGTGGTCTCATCTATCCGCCGCGC
CTCTGCAGATCTATCCGCCGCCTCCTCGATCTCGATCATTTTGCCACCGCGTCGTGCAGACCCGTCCGCCGCCGCATTGCGTAGATCTGTCCCCGGCGCCACGTTGTGCA
GATCCGTCCCGCAGCCGCATCGTGCAGATCCATCATCGCCGCCGCGTCGAGCAGATCCACGAATCACCGCATCGCGCAGATCCGTCCTCGACGCTGCGTCGTGCAGATCC
ACGACCACCGCATCATGTAGACCAGTCCCCACCACCGCGTCGAGCAGATCCACGAACACCGCATCGTGCAGATCCGTCCCTGGCATCGCGTCGAGCAGATCCACGAACAC
CGCATTGCGCAGATCCGTCCCTGGCGCCGCGTAGAGCAGATCCACGAATCGCATCGCGTAGATCCGTCCCCGCCGCCTCGTCGAGCAGATCCACAAACCGTCGTCGCATC
GTGCAAGAACTTCGTCCGCCGCATCGTGCAGGTCTGTTTCCCGCCGCATCATGCAAGTCAGTTCGCTGCCACCTTGTGCATATCCTTCCGCCGCCGCCTCTGCATATCCT
TTCTCGTCGCCGCCGGTTCGTGGTAGTTTTTGGGTTGACCGGTTCGTGGTTCATTGTAGCAACTTTGCACCGCCGGTTCGTGGTAGTTTTTAGGTTCGCTAGTTCTTGGT
AG
Protein sequenceShow/hide protein sequence
MPIKKTFLTKTLFTLGFGNSHLHKNRRRLFISIPLSSPSPEALTSCIVSRLPPVPKGSSTAAATGSWSHLSAAPLQIYPPPPRSRSFCHRVVQTRPPPHCVDLSPAPRCA
DPSRSRIVQIHHRRRVEQIHESPHRADPSSTLRRADPRPPHHVDQSPPPRRADPRTPHRADPSLASRRADPRTPHCADPSLAPRRADPRIASRRSVPAASSSRSTNRRRI
VQELRPPHRAGLFPAASCKSVRCHLVHILPPPPLHILSRRRRFVVVFGLTGSWFIVATLHRRFVVVFRFASSW